Apse025869.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- -
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010033631.1:1-587[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-16 2.1e-12 47.9 3.4 225 300 1 71 1 71 0.90 2 2 0.0092 1e+02 2.9 3.2 122 172 71 121 69 125 0.81
Sequence Information
- Coding Sequence
- ATGCGAAAGTTTGCGTCGGAAAAGAATAAACTGCGAGAAGAAAATCAACGTCTAACGCTAGAATTAGAAGAACTAAGAAATCAAATGAGGCCTGAACGACCCTCAAGTCCCGTGTTAGGTTTATCAGATTTAAAAGATGCTCAAAAAGAAGCCAACAAACTTCTAGCggattataaatttgaaatgcaAAAAGCGGAAAAAGATATGACAACTTTGCAAACAACTGTTTCGAGGTTGAAGAGTCGAATCATTCATTATCAATCTGAAGCTGaagcttttaaaaaagcagaaaatgaattaaaagttaaaaatgaaaagttacAAATGGAGcTGAAGGAATCACAAGGTCGAGTTGAAGAATTAGAAAATGCGAATTCTCACTTACA
- Protein Sequence
- MRKFASEKNKLREENQRLTLELEELRNQMRPERPSSPVLGLSDLKDAQKEANKLLADYKFEMQKAEKDMTTLQTTVSRLKSRIIHYQSEAEAFKKAENELKVKNEKLQMELKESQGRVEELENANSHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073727;
- 90% Identity
- iTF_00073727;
- 80% Identity
- -