Apse025989.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010034379.1:1-870[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 1.3e-12 48.6 3.9 224 300 4 75 2 75 0.89 2 2 0.0047 54 3.8 3.4 122 172 75 125 74 129 0.88
Sequence Information
- Coding Sequence
- ATATTAGTTTCGATGCAAAAGTTTGTGTCGGAAAAGAATAAACTGCGAGAAGAAAATCAACGTCTAACGCTAGAATTAGAAGAAGCAAGAAATCAAATGAGGCCTGAACGACCCTCAAGTCCCGTGTTAGGTTTATCAGATTTAAAAGATGCTCAAAAAGAAGCCAACAAACTTCTAGCGGATTATAAATTAGAAATGCAAAAAGCGGAACAAGATATGACAACTTTACAAACAACTGTTTCAAGGTTGAAGAGTCGAGTCATTCATTATCAATCTGAAGCTGAAGCTTCTAAAAAAGcagaaaatgaattaaaagttaaaaatgaaaagttgcAAATAGAGcTGAAGGAATCACAAGGTCGAGTTGAAGAATTAGAAAATGCGAATTCTCACTTACA
- Protein Sequence
- ILVSMQKFVSEKNKLREENQRLTLELEEARNQMRPERPSSPVLGLSDLKDAQKEANKLLADYKLEMQKAEQDMTTLQTTVSRLKSRVIHYQSEAEASKKAENELKVKNEKLQIELKESQGRVEELENANSHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073728;
- 90% Identity
- iTF_00073728;
- 80% Identity
- -