Apse001020.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010000066.1:81399-83298[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-110 3e-106 356.0 32.6 1 300 29 324 29 324 0.95 2 3 0.011 1.2e+02 2.7 2.5 122 171 324 373 322 377 0.91 3 3 0.14 1.6e+03 -1.0 5.9 193 238 354 398 335 399 0.60
Sequence Information
- Coding Sequence
- ATGGAGACATCAGTGGCAGGAAGGAGGCGAACTGCCACTAGGCATTCAGCTGAAGATCAAGCGCTTGATCAGATTGCTAAAGAGGCAGAGGCAAGGTTAGCTGCAAGAAGACAAGCTAGAGCGGAAGCTAGAGAAATACGAATGAGGGAATTAGAAAGACAACAGAAGGAAGCTGAGGAGAATGCAGACAGAGTTTTTGATATGTGTACAGCAGATGTAACTAGAGCCATGAGGGTTACTCCAGATCCAATACGTGTTTCTAGACTTCATGCCAACAACTTCCAATCAAGCAGAAGATCTTCAGAAGATTCATTGGAAGATGCAGGTCTTGGCAGAGATCTTAGGcTTGAGTTGAAAGAGTGTgaagaaaaatttagaaaagcTATGATAGCTAATGCCCAACTAGATAATGAAAAGTCTTCCTATGCATATCaagttgatttattaaaagacaAATTAGAAGAACTTGAAGAAGTTATTGCTCAACTGCGCCGTGagctgagagaaaaaaatcgcgaaGCAAATCTAGCAACACGTCTTGGTCAAAGACTAAAAGAAGATTTAGATATTTGCAGGGCACAACTTTTAGAAAGAGATACGCTTATCGAAGAAAATGGACTGGTTATAGTTGAAGATGAAGGTAGTGAAGGGGAGGAAACACAAAAAGAGAACGGACCTGTAAGTCGGAAAAGAGTGCTAGTCAGTACAGAAGCTgcagaattattacaaaacgCTGGTGAAGGCTCTTTAGATGTTCGGCTGCGAAAGTTTGcgtctgaaaaaaaagaactgcaAGATGAAATTCGACATCTAAGGCTAGAATTAGAAGAAGCAAGAAACCGTATGAGGCCTGAACGATCCTCAGGTTCCGTGTTAGGTTTATCAGATTCAGAAGATGCTCAAAGAGAAGCCAATAAACTTTTAGcggattataaatttaaaatgcaaaaagcGGAACAAGATATGTCTACTTTACAAGCGACTGTTGCGAGGTTGGAGAGTCAAGTAATTCGTTATAAATCTGCAGCTGAAGCTTCTGAAAAAGCAGAAGATGaattaaaagttgaaaaaagaaagttacaAAGAGAGgTGAGGGAATCACAAGGTCGAGTTGAAGAATTGGAAACGGCGAATTCTCATTTACAACGACGGTTAGATAAGCTGAAAAATGCTAAATCAGCACTTTTAAAAGAACTTTGA
- Protein Sequence
- METSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVFDMCTADVTRAMRVTPDPIRVSRLHANNFQSSRRSSEDSLEDAGLGRDLRLELKECEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEEVIAQLRRELREKNREANLATRLGQRLKEDLDICRAQLLERDTLIEENGLVIVEDEGSEGEETQKENGPVSRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRMRPERSSGSVLGLSDSEDAQREANKLLADYKFKMQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- -