Atra002957.2
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- pnr
- Assembly
- GCA_032362555.1
- Location
- CM063551.1:13105279-13110283[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-16 1.8e-12 47.3 3.7 1 35 460 493 460 494 0.97 2 2 1.5e-17 4.6e-14 52.3 7.3 1 35 522 555 522 556 0.97
Sequence Information
- Coding Sequence
- ATGGAAAACGTTTCACCAATAAATCGTGAGGAGCCTCGGGAAGAAGATGCTTCAGTGGAGGCGTTACAGCTAGTCAAAAACGAAGAGAGAGTGGAAGAGCAGAACATTGAGGCTACTCCTGCGGAGCAGTCCCCCGCGGTGGGCAGGCCGCCGTCGCCGCTGCCGCATTCCCAGTCCGTCATCACGTCGCGGCGGTCCGTCCGGACCATCACTGCGGCCGGACACATCACAGAAACCCCAGAGCTTGCCGATGAAGGCGTTAAGGACGAGCCACCTGAACCCTCTCAGCTCGAACAAGAACAATTACACTACGCACCAAAGCTTGAAGATAACCCTGACGCCAGAGACGTTGCTCAACAGCATTATGACGAAGAGAGATTGAGACTAGCCGAAGCCGAGTCAGAGGCCCGGCACCATGCTTACAAACAAGAATCATATCGGTCTATACCATCTCCTTCGTCAATTGATAAAAGGTTGCAGCAACAATATAGAATCCCTCAGAGACCCGACTACAGACGAAACTTGACGTTCCGTTATGGCGCACCGCATCAAGTGTTGGTTGGTCAGGAGGGCGAAGCTGATGAGCATGCGCATGAAGCGTTCCTGGCGCACAAGGAGAAGGCAGAGCATTTACAAGTGTATGCTTCGCCAGCGGAAGGCGTGCCCACGTCCGACGGGAGGCAGTACGGGGCGGTTCTCAGCGAGCAGGTGGCGGCGTCCAGTGCCTTGGAGATGATCCAGACCACGTCTTTGAGCAACCAGCAGGCAGTGGGCGTGGCGTACCAGCCCGTGAAGTACGAGGCGCGCGAGGGCGAGCCGCGGCCGAGCACGTACGCCAGCCTGCAGCCGGTGACGTCGGTGCACGGCGGCTACAGCTACGCCGGCCAGAGCCCGCAGTACGGCGGCGCCGGGTACAGCGCCTACGTCGGCGGCAGTAAGGAGCTGCTAACTCTGTACGGCGGCGGCGCGCCCCCGGGGCCGGGCCCCGCGGCCGGCGCGCCGCGCGGCGACGAGTCCCCGCCGGGGCAGCTGCTGTACCGCAGCGACCCTACCCTCTCCTCCTCCTCGCTCACGGCGCGGGGGCACGTCGTGTACGGCTCCGTGGTGCCCCCCACCCAGGCCGTGTATGAAGCACCACCTAGCCCTAATTCACAGCAGGTGACGCTGTACACACACGGGAACACGGTCCAATACAAAGTGGGGGGAGAACACTACCTGAGCCAGGGCGGGGGGGTGGAGTACGTGCCGGTGTCGGGCTACGACGGCGGCCTGCTCGTCACGGAGGGCTACGCGGCGCCCGCGCAGGCCTGGTCCACGCACAACCTGCTCGACGATGGATTCGACCCCGGTATGGCAAGTATCGGCGAGATGAAGGAGTGCGTGAACTGCGCGGCCGGCAACACGCCGCTGTGGCGCCGCGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGGCTCTACACGCGCATCAACGGCGTCAACCGGCCTCCGCTCAAGGGACAGAAGGCCAAGCCTCAACAATCTCTGCAGCCCACCAACGGCAACCGGCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCGCCAACACCACGCTGTGGCGCCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGCGGGCTCTACTACAAGCTGCACAACGTGAACCGGCCTCTCAGCATGAAAAAGGACGGCATTCAAACCCGAAAGCGTAAGCCCAAGAGCATGGGCGGCGGTCACAGCGGCCACGTGGGCCGGCCGGGCGCGCCGCTAACCGTGGAGGGTCACGCACATAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGTCGgcgggcgcggggggcgcgggaGGCCAGCCGCTGCTGCTGCTGCCGCCCGCCAGGCACCAAGCCGATATGGTACCCTCGCTAGAGCGCGCCGGGCCCTCCACGCCGCTGCACTACCGCCCGCCCTAA
- Protein Sequence
- MENVSPINREEPREEDASVEALQLVKNEERVEEQNIEATPAEQSPAVGRPPSPLPHSQSVITSRRSVRTITAAGHITETPELADEGVKDEPPEPSQLEQEQLHYAPKLEDNPDARDVAQQHYDEERLRLAEAESEARHHAYKQESYRSIPSPSSIDKRLQQQYRIPQRPDYRRNLTFRYGAPHQVLVGQEGEADEHAHEAFLAHKEKAEHLQVYASPAEGVPTSDGRQYGAVLSEQVAASSALEMIQTTSLSNQQAVGVAYQPVKYEAREGEPRPSTYASLQPVTSVHGGYSYAGQSPQYGGAGYSAYVGGSKELLTLYGGGAPPGPGPAAGAPRGDESPPGQLLYRSDPTLSSSSLTARGHVVYGSVVPPTQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLSQGGGVEYVPVSGYDGGLLVTEGYAAPAQAWSTHNLLDDGFDPGMASIGEMKECVNCAAGNTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQSLQPTNGNRRVGVTCANCRTANTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSGHVGRPGAPLTVEGHAHKVLPPLYAAVESAGAGGAGGQPLLLLPPARHQADMVPSLERAGPSTPLHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00641059; iTF_00013688; iTF_00012601; iTF_01302973; iTF_00146972; iTF_01221159; iTF_00720924;
- 90% Identity
- iTF_00641059; iTF_01221159; iTF_00146972; iTF_00720924; iTF_01302973;
- 80% Identity
- -