Pint003332.1
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- pnr
- Assembly
- GCA_027563975.2
- Location
- CM050467.1:88429-93973[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-16 1.4e-12 47.3 3.7 1 35 459 492 459 493 0.97 2 2 1.6e-17 3.6e-14 52.3 7.3 1 35 521 554 521 555 0.97
Sequence Information
- Coding Sequence
- ATGGAAAACGTCTCGCCTATAAGTCGCGAGGAACCTCGAGAGGAGGACACCTCAGTCGAAGCGCTGCAACTAGTCAAGAACGAGGACAGAGTGGATGAGCAGGCCCCAGACCCTGCTCCTACTGAGCAGCCCCCTTCAGCAGGCCGTGCCCCCTCCCCGCTACCACACTCTCAGTCCGTCATCACATCACGGCGATCTGTCAGAACCATCACCGCAGCCGGACACATTACAGAAACGTCTGAGCTTCATGACGATGGCGTAAAAGATGAACCCCCTGAATCTGCTCAGTTAGAACAGGAGCAACTACACTACGCTCCAAAATTAGAAGAGAACCCTGAAGCCAGAGACGTCGCACAGCAACATTATGACGAAGAAAGGTTGAGATTAGCCGAAGCTGAATCAGAAGCTCGCCACCACGCGTTCAAACAAGAATCCTACCGGTCGATACCGTCGCCATCATCTATCGATAAAAGATTGCAGCAACAATATAGAATTCAACAGAGACCTGACTACAGACGAAACCTGACGTTCCGATACGATGCACCGCATCTTGTCGGGCAGGAAGGAGAAACTGAGGAGCATGCGCATGAGTTCCTCGCACACAAAGAGAAAGAGCATTTGCAGGTTTACGCGTCACCAACTGAAGGAGTGCCGACGTCTGCTGATGGCAGACAGTACGGAGCGGTGTTGAGTGAACAAGTGGCAGCGTCTAGTGCAATGGAGATGATCCAGACTACATCATTGAGTAATCAGcaGGCAGTGGGCGTTGCGTATCAACCCGTAAAATACGAGAGCCGTGGGGAAGGAGAGCCCCGGCCCAGTACCTACGCGAGTCTTCAGCCAGTCACCTCAGTGCATGGAGGGTACAGCTATGCCGGACAGAGTCCGCAGTACGGTGGTGCTGGATATAGTGCATATGTTGGTGGTAGcaagGAACTCCTGACACTGTACGGCGGTGGCGCCACATCCGGTCCCGGGACGGCCCCGAGCGCGGCCCCCCGCGGCGACGAGTCCCCCCCAGGTCAACTTCTATACCGTAGTGACCCGACGCTATCATCTTCTTCGCTGACAGCCCGGGGTCATGTAGTTTATGGTTCAGTTGTGCCACCCACGCAAGCCGTATATGAGGCGCCTCCTAGTCCTAATTCACAACAGGTGACATTGTACACCCACGGCAACACAGTGCAATATAAAGTGGGCGGCGACCACTACCTCAGCCAAGGCGGAGGCGTGGAGTACGTGCCGGTGTCGGGGTACGAGGGAGGGCTGCTGGTCACGGAGGGCTATGCCGCGCCCGCGCAGGCCTGGTCTGCGCACAACCTGCTGGAGGACGGCTTTGACCCAGGCATGGCAAGCATAGGCGAGATGAAGGAGTGCGTGAACTGCGCGGCCGGCAACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTGTACACCAGGATCAACGGCGTCAACCGGCCGCCCTTGAAGGGACAGAAGGCCAAGCCGCAACAAACTTTGCAACCGAGCAACGGAAACCGTCGCGTGGGGGTGACCTGCGCCAACTGCCGCACGGCCAACACGACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCATAACGTGAACCGGCCCCTCAGCATGAAGAAGGACGGCATCCAAACTCGAAAGCGTAAACCGAAGAGCATGGGCGGCGGCCACAGTAGCCACGTGACCCGGCCTGGCGCGCCACTCACCGTGGAGGGTCACGCACACAAAGTGCTGCCTCCGCTGTACGCGGCGGTGGAGACGGCGGGCGCGGGGTGCGCGGGGGGCCCGCTGCTGCTGCTGCCGCCGAGACACCAAGCCGATGTGGTACCCTCGCTAGATCGTGCTGGCCCCTCCACGTCGATGCACTACAGACCGCCTTAA
- Protein Sequence
- MENVSPISREEPREEDTSVEALQLVKNEDRVDEQAPDPAPTEQPPSAGRAPSPLPHSQSVITSRRSVRTITAAGHITETSELHDDGVKDEPPESAQLEQEQLHYAPKLEENPEARDVAQQHYDEERLRLAEAESEARHHAFKQESYRSIPSPSSIDKRLQQQYRIQQRPDYRRNLTFRYDAPHLVGQEGETEEHAHEFLAHKEKEHLQVYASPTEGVPTSADGRQYGAVLSEQVAASSAMEMIQTTSLSNQQAVGVAYQPVKYESRGEGEPRPSTYASLQPVTSVHGGYSYAGQSPQYGGAGYSAYVGGSKELLTLYGGGATSGPGTAPSAAPRGDESPPGQLLYRSDPTLSSSSLTARGHVVYGSVVPPTQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGDHYLSQGGGVEYVPVSGYEGGLLVTEGYAAPAQAWSAHNLLEDGFDPGMASIGEMKECVNCAAGNTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQTLQPSNGNRRVGVTCANCRTANTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSSHVTRPGAPLTVEGHAHKVLPPLYAAVETAGAGCAGGPLLLLPPRHQADVVPSLDRAGPSTSMHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073395;
- 90% Identity
- iTF_00073395;
- 80% Identity
- -