Rfor006120.1
Basic Information
- Insect
- Rhodophaea formosa
- Gene Symbol
- pnr
- Assembly
- GCA_963082605.1
- Location
- OY720207.1:24611409-24617528[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-16 2.1e-12 47.3 3.7 1 35 461 494 461 495 0.97 2 2 1.5e-17 5.5e-14 52.3 7.3 1 35 523 556 523 557 0.97
Sequence Information
- Coding Sequence
- ATGGAAAACGTCTCGCCAATAAGTCGCGAGGAGCCTCGAGAGGAAGACACCTCCGTGGAAGCGCTACAGCTAGTCAAGAATGAGGAGAGAATGGAAGAGCAGAACACAGAGGCGGCGCCTGCCGAGCATTCCCCAGGAGTGGGCCGTGCGCCTTCGCCGCTACCGCATTCACAGTCCGTCATCACCTCCAGACGGTCGGTGAGAACCATCACCGCCGCTGGACACATCACGGAGACCACGGAGCTTGGTGACGATGGCGTCAAAGACGAACCTCCCGAATCATCTCAGATGGACCCGGATCAGCAACTACACTACGCTCCCAAACTCGAAGACAACTCCGATGCCAGAGAGATTGCTCAACAACACTACGATGAGGAGCGGCTCAGATTAGCCGAAGCTGAATCAGAAGCGAGACATCATGCGTTCAAACAGGAGTCCTACCGGTCGATACCGTCACCAAATTCAGTCGATAAGAGATTGCAGCAACAGTACAGAATACCGCAGAGACCGGACTATAGACGGAGCTTGACATTCCGGTACGGCGCACCTCATCAAGTAGTCGTAGGTCAAGAGGGCGAAACTGACGAACACGCACATGAAGCCTTCCTCGCACACAAGGAAAAGGCTGAGCAGCTACAGGTGTACGCGACTGCAGAGGGCGTGCCGACGTCTGTGGATGGAAGGCAGTACGGTGCGGTTCTCGGCGAACAAGTGGCAGGATCGAGTGCACTGGAGATGATTCAGACTACGTCGCTTAGTAATCAGCAGGCCGTAGGCGTAGCGTACCAGCCGGTGAAGTACGAGGGCCGTGAGAGCGAGCCGCGCCCCACCACGTACGCCAGCCTGCAGCCCGTCACCTCCGTGCACGGGGGCTACAGCTACGCGGGGCAGAGCCCGCAGTACAGCGCGGGCTACAGCGCCTACGTCGGTGGCAGCAAGGAGCTGCTGACTCTGTACGGCGGTGGTGGGGCCTCAGGCCCTGGCCCGGCCCCCAGCACAGCCCCGCGCGGCGACGAGTCCCCGCCAGGCCAGCTGCTGTACCGCAGCGACCCCACGCTGTCGTCCTCCTCGCTGACGGCCCGAGGCCACGTGGTGTACGGCTCCGTGGTGCCGCCCACGCAAGCGGTCTACGAGGCGCCGCCTAGTCCTAACTCACAACAAGTGACTCTGTACACGCACGGCAACACGGTGCAGTACAAGGTGGGCGGCGAGCACTACTTAGGGCAGGGCGGCGGCGTGGAGTACGTGCCGGTGTCGGGCTACGAGGGCGGGCTGCTCGTCACCGAGGGCTACGCCGCGCCCGCGCAGGCCTGGTCCACGCACAACCTGCTCGACGATGGCTTTGATCCTGGCATGGCGAGCATCGGCGAGATGAAGGAGTGCGTGAACTGCGCGGCGGGCAACACGCCGCTGTGGCGACGCGACGGCACGGGCCACTACCTGTGCAACGCCTGCGGGCTCTACACCAGGATCAACGGCGTCAACCGCCCGCCGCTCAAGGGCCAGAAGGCCAAACCCCAGCAGGCACTGCAACCGACGAACGGCAACCGGCGCGTAGGCGTGACGTGCGCCAACTGCCGCACGGCCAACACCACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGTGGCCTCTACTACAAGCTGCACAATGTTAACCGGCCACTCAGCATGAAGAAAGACGGCATCCAGACCAGGAAGCGCAAGCCCAAGAGCATGGGCGGCGGCCACAGCGGCCACGTGGCCCGCCCCGGAGCGCCCCTAACCGTGGAGGCACACGCACACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGTCGGCggggggcgcgggcgcggggagCCTGCTGCTGCTGCCGCCGGCCAGACACCAAGCCGATATGGTACCCTCGCTAGAGCGCGCCGGGCCGTCCGCGGCGCTGCACTACCGCCCGACGTAA
- Protein Sequence
- MENVSPISREEPREEDTSVEALQLVKNEERMEEQNTEAAPAEHSPGVGRAPSPLPHSQSVITSRRSVRTITAAGHITETTELGDDGVKDEPPESSQMDPDQQLHYAPKLEDNSDAREIAQQHYDEERLRLAEAESEARHHAFKQESYRSIPSPNSVDKRLQQQYRIPQRPDYRRSLTFRYGAPHQVVVGQEGETDEHAHEAFLAHKEKAEQLQVYATAEGVPTSVDGRQYGAVLGEQVAGSSALEMIQTTSLSNQQAVGVAYQPVKYEGRESEPRPTTYASLQPVTSVHGGYSYAGQSPQYSAGYSAYVGGSKELLTLYGGGGASGPGPAPSTAPRGDESPPGQLLYRSDPTLSSSSLTARGHVVYGSVVPPTQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVTEGYAAPAQAWSTHNLLDDGFDPGMASIGEMKECVNCAAGNTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALQPTNGNRRVGVTCANCRTANTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSGHVARPGAPLTVEAHAHKVLPPLYAAVESAGGAGAGSLLLLPPARHQADMVPSLERAGPSAALHYRPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073395;
- 90% Identity
- iTF_00073395;
- 80% Identity
- -