Aocu007584.1
Basic Information
- Insect
- Amphipoea oculea
- Gene Symbol
- Znf711
- Assembly
- GCA_945859585.1
- Location
- CAMAOF010000056.1:3369357-3372418[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0039 0.31 11.9 0.5 1 23 243 266 243 266 0.94 2 18 6.8e-06 0.00055 20.6 3.4 1 23 271 293 271 293 0.99 3 18 3.5 2.8e+02 2.6 0.2 2 23 297 318 297 318 0.87 4 18 0.0025 0.2 12.5 0.8 1 23 323 346 323 346 0.96 5 18 0.0013 0.11 13.4 0.6 2 23 407 429 406 429 0.95 6 18 0.00011 0.0088 16.8 1.2 1 23 435 458 435 458 0.96 7 18 0.00071 0.057 14.2 0.3 3 21 463 481 461 482 0.94 8 18 0.0077 0.62 11.0 0.7 1 23 490 513 490 513 0.95 9 18 0.051 4.1 8.4 0.4 2 23 554 575 553 575 0.94 10 18 0.00025 0.02 15.7 2.3 1 23 581 603 581 603 0.97 11 18 8.8 7.1e+02 1.4 0.1 2 9 609 616 608 619 0.88 12 18 0.0041 0.33 11.8 2.7 1 23 639 661 639 661 0.96 13 18 0.0046 0.37 11.7 0.2 2 23 666 687 665 687 0.93 14 18 0.016 1.3 10.0 2.2 2 23 713 735 712 735 0.96 15 18 0.0013 0.1 13.5 3.6 1 23 741 763 741 763 0.98 16 18 0.0016 0.13 13.1 4.1 2 23 770 791 769 791 0.96 17 18 5.6e-05 0.0045 17.7 1.2 1 23 797 820 797 820 0.96 18 18 0.23 18 6.3 1.3 2 23 826 848 825 848 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAAGTAGATTCAAATCAAACCACTCCAGAGCACTTAGAATGGATAAAACAGAAGCTCAAGACAGTGTGGACATCTCCCAAATTCTGCGGACTATGTTTGGAGAGCTGTGGCAACTTCTGTTCTGTTGATATGGAACTCGTCATCAGCCATCAGACATTCTCTAAATGTCTGCAAGATATACTGAACTATGTATTTAATGAAGATATTGAAAACTTAATGTCAAGTCCACACTTATGCGACAGTTGCACAGAGAAGACAATACAATCTTACCTCTTCATACACAACACAAAACAACTGAACAAAATCCTTAACAACTGCATCTCCGACCTTGACTCCAAAGTAATTGACATCAACGCACAACTTGATGAATCCATGACATATGATACGGCCAATGTAATGATTGTCCTGGAAAACGACACAGGACTATACAAAACAATCATTGATGTTAAGTCGACGACTGAAATTGTACCAACCTCTAAACCAATTGCAATGAAAGAACCAGTTAATCCAACGCCACCGCAGCCAAAAGTAATTCAAGTTGCAAAACCTCTTAAACCCATAGTAATAAAGAAGGAAATTGAAAAACCTACAGAAGTCAGGCCAGTCAAAGTAAGGAAAATTATAAAAGCTGATGGAACTCCAAATATAAGCCTGAAAGAAGGTCACATTGTGATAAAGCCTTTAAGCTCTGTACGAACCTCAGCTCCACGATACAACACTTATGAATGCACTGATTGTCCAGATATTTTCACTACGTACAGATCCTTGAAGGAACATGAAAAGGCCAAGCATAAAAAGTATGTTTACCGCTGCAAGTTATGCGATAAGACTTATAACACTCAGCAATATTTGAACATTCATTACAAGACGCATAGCCGGGCTAGGTGCAAGTTATGTCAACTTATTCTCCCTGAAGGGGATTTAATGGAACATTTGAGGACACTTCATCCTAATTTAGTATACCCTTGCAAGTTTTGTGACCTAGTCTACTACACCCAAGAGTCTTTGGATACACATTTCAAAATAAGCCATTTAGTCAACGACACAAGAGCTAAATCTCAATGCGTTATGTGTCTAAAGAACTTTGTGGATGCCGAAATGAAGAAACATAAATGCAAGTTCTCATGCTCAGAATGTTTTGTGATGCCATGCGTTCACTATAAGTATTTAAATTCTTATAGAGAGCAGGTTTTGAGCCATGTAAATAAAATAAAATGCTTGGATTGCGACTATGTGACTCGACGCAAAGAACATCTAATAGGCCACGCTAACAGAGAGCATTTGGACCATCATCCGTTTACTTGTGCTGACTGTGGTCAACAGTTTTACACTAAGTTGAGTTTAAAAACACACATCATGCAATTCCATGAAGATCTATTTTGTCCGTACTGCGACTTTGAATTTAAAGACAGTAGAACTTTGATAACACATAGGAAAGCCTGCAAGCTTGTTATACGGTCATTCCAGTGTACACACTGTGTTGCCTCTTTCGACGTCTTGGAAGAGTTGACCAATCATGAGAACTTAAAACATAATGACGGAGTGTACGCTTGCAGTCTTTGTAAAAGCAAATTCCTTATGGAAATAGAACTTGAAGAGCACCATGCTAGGATTCATGGGGGAATACAATGCAAGAAAAGAAGAAAACACATTGAATGCTCTTTGTGCAACATAATGTTTAAAAATATAAAAGAAATGCTTCAACATGAAAAGTTTCACGGAGAAGATGATGTTTATCCGTGCAAAGTGTGCTCGAAGAAATTTAAATCATTAAGTAAATTATACATTCATAATCAAAGGCATTATACCAACAGAATAAAATGTTCTGGATGTAACAAAAGGGTAGCTGCATCATTCTATCCCCAGCATGCGGTGAGGTGCCCTTATAAAAGAGATACAACTTTGAGCCATATTTGTGAAGTATGCGGCAAGTCCTTCCACTTGGAATCCTTACTACGCTTCCATCAAAGAATCCACTTGGACCCAAAACCATGTCCGGAATGCAACAAGGTTATGAAACCTTCAAGTCTAAAAAGACATATGGAGCTAGTCCATGGAGTTGGTGCAGACCAAGAGTATGACGGCACGGAACCGAGGAAACAAAGAGTTGGATCAAACAAGCCATCAATTAAATGTGACTTATGTGGACATGTAGTGAGAAAGAAATGTGACTTAGACGCTCATTTGAACCGATATCATCTGAAAATCAAGCCGTACATCTGTCATATATGCAGTAAAGACTTCTGCGGTAAAGTTCGACTGAAAGAACATATTTCAACGCACACAAATGACAACAGTTGCTTTTGTTCCGTTTGTGGAGGAAAGTTTGCGAACCGTGTGTGTCTTAAAATGCATATGAGAATGCATACTGGGGAAGCACCTTACCCCTGCGATCTGTGTGGACAAAGATTCAGGTCGTCTAGTATGATGAAGAGTCATAGAATTAAGAAACATATGGAGAAAACAGTCAGTTGTCCGCTGTGTGATAGTATGTTCTTCATGGCCAGGGATATGAGACATCACTTCAAGAAAGCTCATTGGAAATTCAAGGATGGTAGACCGTTTGATCCTAAGGATGTTGTAGAGTTACCCGAGGAGTCGTATTATCTTTTTGAAGACGGTAGATTGCCTAAACTTAATCAAGATTAG
- Protein Sequence
- MEEVDSNQTTPEHLEWIKQKLKTVWTSPKFCGLCLESCGNFCSVDMELVISHQTFSKCLQDILNYVFNEDIENLMSSPHLCDSCTEKTIQSYLFIHNTKQLNKILNNCISDLDSKVIDINAQLDESMTYDTANVMIVLENDTGLYKTIIDVKSTTEIVPTSKPIAMKEPVNPTPPQPKVIQVAKPLKPIVIKKEIEKPTEVRPVKVRKIIKADGTPNISLKEGHIVIKPLSSVRTSAPRYNTYECTDCPDIFTTYRSLKEHEKAKHKKYVYRCKLCDKTYNTQQYLNIHYKTHSRARCKLCQLILPEGDLMEHLRTLHPNLVYPCKFCDLVYYTQESLDTHFKISHLVNDTRAKSQCVMCLKNFVDAEMKKHKCKFSCSECFVMPCVHYKYLNSYREQVLSHVNKIKCLDCDYVTRRKEHLIGHANREHLDHHPFTCADCGQQFYTKLSLKTHIMQFHEDLFCPYCDFEFKDSRTLITHRKACKLVIRSFQCTHCVASFDVLEELTNHENLKHNDGVYACSLCKSKFLMEIELEEHHARIHGGIQCKKRRKHIECSLCNIMFKNIKEMLQHEKFHGEDDVYPCKVCSKKFKSLSKLYIHNQRHYTNRIKCSGCNKRVAASFYPQHAVRCPYKRDTTLSHICEVCGKSFHLESLLRFHQRIHLDPKPCPECNKVMKPSSLKRHMELVHGVGADQEYDGTEPRKQRVGSNKPSIKCDLCGHVVRKKCDLDAHLNRYHLKIKPYICHICSKDFCGKVRLKEHISTHTNDNSCFCSVCGGKFANRVCLKMHMRMHTGEAPYPCDLCGQRFRSSSMMKSHRIKKHMEKTVSCPLCDSMFFMARDMRHHFKKAHWKFKDGRPFDPKDVVELPEESYYLFEDGRLPKLNQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039145;
- 90% Identity
- iTF_00121735;
- 80% Identity
- iTF_00071970;