Asol106908.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963170755.1
- Location
- OY720680.1:81407066-81453851[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-104 4.1e-99 334.9 32.0 6 300 2 292 1 292 0.93 2 2 0.015 2.6e+03 0.6 5.1 120 167 290 337 289 366 0.74
Sequence Information
- Coding Sequence
- ATGCTGGCGAAGCGACAAGCCCGTGCAGAAGCCAGAGAGATTCGCATGAGAGAACTAGAAAGGCAACAGAAAGAACAAGAAGAAAATGCTGATAGACAGTTTGATATGTTGGCAGAGCCTATTAGGTCCGCACGCACTACAGGATCGAGATACCTTTCCAGTAGGCGGAGTTCCGAGGACTCCCTGGAAGATAATGGTAGTCTTAGGGAATTACGACATGAACTTAAAGAAGTCGAAGAGAAGTTCCGCAAGGCCATGGTGGCGAATGCCCAGCTAGATAACGATAAAGCGGCGCAAACATATCAACTGGAACTACTTAAGGATAGGTTAGAAGAACTGGAAGAAGAACACTCCCAACTAAAGAGGGAACACAGGGATACATGTAGAGAACACGATCAACTGAAGAGATTGACGGGGAGGTTGAAAGAAGAATTGGCTGTGACAAAGTCTGAATTAGAAGAACGGGATAGGCTTATAACGGAAAAGGGTTTAGTTATCGTAGGGGATGATTCAGTGCTGAACGAGGAAGCTGGAACGTCGGATGGGGCGGCTGTGAATGGTTTAGGTACGCCTAAAAAGGCGCTGGTTAGTGCGGAAAACGCACAATTGTTAGTTAATGCAGGTGAAGGTAGTTTAGATGTTCGGCTGGCAAGATTTGCGAAAGAAAAGGGCGAGCTGCAGGATCAGATTAGTCATTTGAAGTTGGAACTGGAAGAAGAAAGGAGTAAGCGGCGGAAATCCAATGTGTCTGGTATCACTTTGAACGGTCCTACTTCCGACGCAGATTATGATGCTGCAGATATACAAAGGGAGGTCAGCAAACAGTTAGCAGAATATAAGTTCAGATCGCAAAAAGCGGAACAGGATGTGGCCACGTTACAGGCGACAGTCGCCAGATTAGAAAGTCAAGTCATTAGGTATAAATCTGCCGCGGAGGTTTCAGAAAAATCCGAAGAAGCGCTCAAAGCGGAAAAACGAAAATTACAAAGAGAGGCACGGGAAGCGATGAATAGGGCCGAAGAACTGGAAACGTCAAATACACATTTACTTAAGCGATTAGACAAATTGAAAACTGCAAAATCAGCACTGCTCAAGGAACTTTGA
- Protein Sequence
- MLAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPIRSARTTGSRYLSSRRSSEDSLEDNGSLRELRHELKEVEEKFRKAMVANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHRDTCREHDQLKRLTGRLKEELAVTKSELEERDRLITEKGLVIVGDDSVLNEEAGTSDGAAVNGLGTPKKALVSAENAQLLVNAGEGSLDVRLARFAKEKGELQDQISHLKLELEEERSKRRKSNVSGITLNGPTSDADYDAADIQREVSKQLAEYKFRSQKAEQDVATLQATVARLESQVIRYKSAAEVSEKSEEALKAEKRKLQREAREAMNRAEELETSNTHLLKRLDKLKTAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01329811;
- 90% Identity
- iTF_00956310;
- 80% Identity
- -