Asol013739.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:122612209-122615905[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 6.2e-11 45.0 0.0 4 45 20 61 17 61 0.94
Sequence Information
- Coding Sequence
- AtgccaaatatttacacaaggaAAGGTAATGTACACCGAGGAAACTGGACGTCCAGAGCACTTCAAGATGCCTTAACTGCAGTAGCAAATGGAGCAATGGGGTTGAACGAAGCTGCTAGAAATTTTGGAATACCAGCAACCACATTGAAACGTAGAAAACGAAATGGTAATCCTACGAAACAAAATCGTCTCGGTCCGCCATCGTCTTTGGGCGAGGATGCAGAAATCAAATTAGTGCGACATATCAAAAAGCTTCAAAAATTTGGTTTTGCTCCTACCAGGGATGTACTCCGTAGAATGACGTATGACTTGGCTGAAAAGATGAATATTAAACACAAGTTTAACAGAGCCACTGGTAAAGCAGGGTTCGTTTGGCTTCAGTTGTTTTTAAGGCGCCATCCGGATCTATCGGTGCGAAAGTCGGAGGGAGTATCCCTTCTTCGCTCACAGGGAATGTCAAGAAAAGCTGTATCAGATTATTTTAAACTTCTAGAAAACACTCTTATAGAAAACGACTTATTGGAAAAACCCGGAAATATTTACAACATGGATGAAACCGGCCTTCAACTCAATAATAAGGCCGGACATGTGGTCGCTGCAAAAGGCTCTAAAACCATCTCTGCTATAACTTCTGGCGAAAAAGGAGAAACAATCAGTGTTGTAGCTTGTTGTAATGCTGAAGGGTCATTTTTGCCCCCGTATTGCATTTTTAAAGGGAAAAATAAGAAGGACAACTGGGCTGACGGTATGCCACCTGGTTCTTCTATTAGGATGTCCCCCAAGTCGGCATACGTTAACAGTGAAATTTTTCTTGATTggttaaaaaatcattttgtccCTAGAAAAAGACCTGGTAAAGTACTTTTACTACTGGACGGACACACTTCGCATACTAATTCGATTGATGTGTTAGAATTTGCTGAAGAAAATGAGATAATTCTATTGTGCTTTCCGGGTCATACCACTCATTATTTGCAACCACTGGATCGAGCTTTTTTTAAATCGTTGAAGTCGCATTACTATgcggaatgcaataaatttataagaatcaAACCAACAAGAAAATTGAATAGAACAGTGTTTGGAAAACTATTTGGAGATTCGTGGAACAAAGCAGCCACCGCGCAAAATGCCATTTCTGCCTTTAGGGCTACTGGTGTTGTGCCACTTAACCAAGATGCAATTCCTGAGTATGCCTTTTTAATGATCGATGATGATAACGTTCAGCCACCAAATTCATTCCAACCATCACCGAATCCTTCAAACTCACCACAACCGGGCCCATCACACGAATATGAAACTCGGCGATCTTGCACTCCGCCGATTCAACATTCTCGGACTAACAATCAAGTATTGGTAGAAACACCAAAGAAAACTCCAGGAAAATTGCTGGATGAAGTTTCCCCGATCCCAGAAATTAAACCCTTAAGTGAAGTAAGAAAACGTGGAAGAAATGTGGCAACAGTTCTTAATTCAAGTAAGAATATTAAAGCCATGAAAGAAAAAAGTGATTCAaaacagaagaaaaagaaaaatgtaaagaacacagcaaagatgggtgcaaaacaaaatcaaatgaaaaggaaaaccaagaaaaaaattcaatCGCCTGAAAACTCAGATTGGTCGATGGATTACGAGAGTCCAGAATTGAATGACTCTGAAGATAGTGGAGATGAAGATTATGAAACCACCTGCGCTGGTTGTGGGGAGaactacataaaaacaaaaaaaATCGGATTTAACATTCAAAACTTGACTAAAATGATCGGACAAACAGTTATCCAAACAAGAAGAGCTGTAATAGTCAAGCGGCAAATTAGTCACAAAATTATCAATACAAGAGGACGATGTATTAAAACTCTACTGTGTACATCAATCGTTGCATGCAAACTAAAACTATTCACATCATTAAAAGCTCGCAAGTTCGCCGATGCCACAGCAAAGTCTACGTTAAAATCTCCACCTAAAATTATGTACTTATTTTCactagaaatcaagtcaaacAAACTCGCGAAGCTCCCAACAAACATATCAAAGTCAGCCTCAGATGGGcgataa
- Protein Sequence
- MPNIYTRKGNVHRGNWTSRALQDALTAVANGAMGLNEAARNFGIPATTLKRRKRNGNPTKQNRLGPPSSLGEDAEIKLVRHIKKLQKFGFAPTRDVLRRMTYDLAEKMNIKHKFNRATGKAGFVWLQLFLRRHPDLSVRKSEGVSLLRSQGMSRKAVSDYFKLLENTLIENDLLEKPGNIYNMDETGLQLNNKAGHVVAAKGSKTISAITSGEKGETISVVACCNAEGSFLPPYCIFKGKNKKDNWADGMPPGSSIRMSPKSAYVNSEIFLDWLKNHFVPRKRPGKVLLLLDGHTSHTNSIDVLEFAEENEIILLCFPGHTTHYLQPLDRAFFKSLKSHYYAECNKFIRIKPTRKLNRTVFGKLFGDSWNKAATAQNAISAFRATGVVPLNQDAIPEYAFLMIDDDNVQPPNSFQPSPNPSNSPQPGPSHEYETRRSCTPPIQHSRTNNQVLVETPKKTPGKLLDEVSPIPEIKPLSEVRKRGRNVATVLNSSKNIKAMKEKSDSKQKKKKNVKNTAKMGAKQNQMKRKTKKKIQSPENSDWSMDYESPELNDSEDSGDEDYETTCAGCGENYIKTKKIGFNIQNLTKMIGQTVIQTRRAVIVKRQISHKIINTRGRCIKTLLCTSIVACKLKLFTSLKARKFADATAKSTLKSPPKIMYLFSLEIKSNKLAKLPTNISKSASDGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065153; iTF_00065378; iTF_00065155; iTF_00065156; iTF_00065157; iTF_00065158; iTF_00065350; iTF_00065159; iTF_00065223; iTF_00065160; iTF_00065161; iTF_00065165; iTF_00065137; iTF_00065169; iTF_00065171; iTF_00065140; iTF_00065174; iTF_00065112; iTF_00065144; iTF_00065180; iTF_00065151; iTF_00065471; iTF_00065152; iTF_00065154; iTF_00065479; iTF_00065163; iTF_00065100; iTF_00065132; iTF_00065261; iTF_00065138; iTF_00065143; iTF_00065147; iTF_00065148; iTF_00065149; iTF_00065150;
- 90% Identity
- iTF_00065149;
- 80% Identity
- -