Asol098557.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:140851360-140853202[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-13 5.2e-11 45.3 0.0 4 45 20 61 17 61 0.94
Sequence Information
- Coding Sequence
- AtgccaaatatttacacaaggaAAGGTAATGTACACCGAGGAAACTGGACGTCCAGAGCACTTCAAGATGCCTTAACTGCAGTAGCAAATGGAGCAATGGGGTTGAACGAAGCTGCTAGAAATTTTGGAATACCAGCAACCACATTGAAACGTAGAAAACGAAATGGTAATCCTACGAAACAAAATCGTCTCGGTCCGCCATCGTCTTTGGGCGAGAATGCAGAAATCAAATTAGTGCGACATATCAAAAAGCTTCAAAAATGTGATTTTGCTCGTACCAGGGATGTACTCCGTAGAATGGCGTATGACTTGGCTGAAAAGATGAATATTAAACACAAGTTTAACAGAGCCACTGGTAAAGCAGGGTTCGTTTGGCTTCAGTTGTTTTTAAGGCGCCATCCGGATCTATCGGTGCGAAAGTCGGAGGGAGTATCCCTTCTTCGCTCACAGGGAATGTCAAGAAAAGCTGTATCAGATTATTTTAAACTTCTAGAAAACACTCTTATAGAAAACGACTTATTGGAAAAACCCGGAAATATTTACAACATGGATGAAACCGGCCTTCAACTCAATAATAAGGCCGGATATGTGGTCGCTGCAAAAGGCTCTAAAACCATCTCTGCTATAACTTCTGGCGAAAAAGGAGAAACAATCAGTGTTGTAGCTTGTTGTAATGCTGAAGGGTCATTTTTGCCCCCGTATTGCATTTTTAAAGGGAAAAATAAGAAGGACAACTGGGCTGACGGTATGCCACCTGGTTCTTCTATTAGGATGTCCCCCAAAAAAAGACCTGGTAAAGTACTTTTACTACTGGACGGACACACTTCGCATACTAATTCGATTGATGTGTTAGAATTTGCTGAAGAAAATGAGATAATTCTATTGTGCTTTTCGGGTCATACCACTCATTATTTGCAACCACTGGATCGAGCTTTTTTTAAATCGTTGAAGTCGCATTACTATgcggaatgcaataaatttataagaatcaAACCAACAAGAAAATTGAATAGAACAGTGATTGGAAAACTATTTGGAGATTCGTGGAACAAAGCAGCCACCGCGCAAAATGCCATTTCTGCCTTTAGGGCTACTGGTGTTGTGCCACTTAACCAAGATGCAATTCCTGAGTATGCCTTTTTAATGCTCGATGATGATAACGTTCAGCCACCAAATTCATTCCAACCATCACCGAATCGTTCAAACTCACCACAACCGGGCCCATCACACGAATATGAAACTCGGCGATCTTGCACTCCGCCGATTCAACATTCTCGGACTAACAATCAAGTATTGGTAGAAACACCAAAGAAAACTCCAGGAAAATTGCTGGATGAAGTTTCCCCGATCCCAGAAATTAAACCCTTAAGTGAAGTAAGAAAACGTGGAAGAAATGTGGCAACAGTTCTTAATTCAAGTAAGAATATTAAAGCCATGAAAGAAAAAAGTGATTCAaaacagaagaaaaagaaaaatgtaaagaacacagcaaagatgggtgcaaaacaaaatcaaataaaaaggaaaaccaagaaaaaaattcaatCGCCTGAAAACTCAGATTCGTCGATGGATTACGAGAGTCCAGAATTGAATGACTCTGACGATAGTGGAGATGAAGATTATGAAACCACCTGCGCTGGTTGTGGGGAGAACTACATAGAAACAAAAAAAGTTGAAGACTGGATCAAGTGTATTCGATGTGGACGATGGATGCACGAAAACTGcaccaaatatttgaatttttgcgatatttgtggcaaacatgccaagaaataa
- Protein Sequence
- MPNIYTRKGNVHRGNWTSRALQDALTAVANGAMGLNEAARNFGIPATTLKRRKRNGNPTKQNRLGPPSSLGENAEIKLVRHIKKLQKCDFARTRDVLRRMAYDLAEKMNIKHKFNRATGKAGFVWLQLFLRRHPDLSVRKSEGVSLLRSQGMSRKAVSDYFKLLENTLIENDLLEKPGNIYNMDETGLQLNNKAGYVVAAKGSKTISAITSGEKGETISVVACCNAEGSFLPPYCIFKGKNKKDNWADGMPPGSSIRMSPKKRPGKVLLLLDGHTSHTNSIDVLEFAEENEIILLCFSGHTTHYLQPLDRAFFKSLKSHYYAECNKFIRIKPTRKLNRTVIGKLFGDSWNKAATAQNAISAFRATGVVPLNQDAIPEYAFLMLDDDNVQPPNSFQPSPNRSNSPQPGPSHEYETRRSCTPPIQHSRTNNQVLVETPKKTPGKLLDEVSPIPEIKPLSEVRKRGRNVATVLNSSKNIKAMKEKSDSKQKKKKNVKNTAKMGAKQNQIKRKTKKKIQSPENSDSSMDYESPELNDSDDSGDEDYETTCAGCGENYIETKKVEDWIKCIRCGRWMHENCTKYLNFCDICGKHAKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065173;
- 90% Identity
- iTF_00065479; iTF_00065378; iTF_00065171; iTF_00065173; iTF_00065157; iTF_00065158; iTF_00065160; iTF_00065137; iTF_00065152; iTF_00065154; iTF_00065163; iTF_00065132; iTF_00065174; iTF_00065153; iTF_00065350; iTF_00065159; iTF_00065161; iTF_00065140; iTF_00065112; iTF_00065144; iTF_00065146; iTF_00065180; iTF_00065151; iTF_00065143; iTF_00065147; iTF_00065148;
- 80% Identity
- -