Basic Information

Insect: Amiota minor
Gene Symbol: su(Hw)
Assembly: GCA_037043295.1
Location: JBAMAW010002167.1:2482486-2485223[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00078 0.079 14.1 1.3 1 20 135 154 135 156 0.95

2 12 1.9e-06 0.00019 22.3 0.3 3 23 207 228 205 228 0.93

3 12 0.019 2 9.7 0.1 1 23 234 256 234 256 0.95

4 12 4.1e-06 0.00041 21.3 4.0 1 21 263 283 263 284 0.95

5 12 4.7e-07 4.8e-05 24.2 0.5 2 23 296 317 295 317 0.96

6 12 9.3e-05 0.0094 17.0 5.3 1 23 328 350 328 350 0.99

7 12 0.00025 0.025 15.6 0.8 1 23 356 378 356 378 0.97

8 12 5.5e-06 0.00055 20.9 0.8 1 23 384 406 384 406 0.99

9 12 1.8e-06 0.00018 22.4 2.3 1 23 412 434 412 434 0.98

10 12 0.0019 0.19 12.9 0.8 1 23 438 460 438 460 0.96

11 12 0.034 3.5 8.9 1.2 3 20 473 490 471 495 0.89

12 12 9.9e-05 0.01 16.9 0.1 3 23 513 534 512 534 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00078	0.079	14.1	1.3	1	20	135	154	135	156	0.95
2	12	1.9e-06	0.00019	22.3	0.3	3	23	207	228	205	228	0.93
3	12	0.019	2	9.7	0.1	1	23	234	256	234	256	0.95
4	12	4.1e-06	0.00041	21.3	4.0	1	21	263	283	263	284	0.95
5	12	4.7e-07	4.8e-05	24.2	0.5	2	23	296	317	295	317	0.96
6	12	9.3e-05	0.0094	17.0	5.3	1	23	328	350	328	350	0.99
7	12	0.00025	0.025	15.6	0.8	1	23	356	378	356	378	0.97
8	12	5.5e-06	0.00055	20.9	0.8	1	23	384	406	384	406	0.99
9	12	1.8e-06	0.00018	22.4	2.3	1	23	412	434	412	434	0.98
10	12	0.0019	0.19	12.9	0.8	1	23	438	460	438	460	0.96
11	12	0.034	3.5	8.9	1.2	3	20	473	490	471	495	0.89
12	12	9.9e-05	0.01	16.9	0.1	3	23	513	534	512	534	0.96

Sequence Information

Coding Sequence: ATGAGTAAATCAGCAGTTGAACCGGCTGCCGCAGGGAGCGAAAGGGCAAAACGTAGCTCTGCTTCGGGCGTCAAAATCTTAAATGATGAAAAGATTTCGCCTTCACCAGCTAAAGGATCTACTCTTTCGATTGCAAAACGCAAATTAGCTGCTACTAAGAAGAGTCAATCGCACTATGTGTTACAAACTGTTAAAAACGAATCCAATAACACGACTGGCGGAGGCACTGTTATTAGTTTAACCGACGACGATGCCATCAACATTGTTCTTGCCGAAAATAATGACGAAGAAAATGCAGTCACATCAAAGATCGGTCGACGAACTGGCGAGATCACTGAAGAATTCCACATCAGTGGTGAGGAGGGCGATGGTGAAAACGATCGTGTCAAAGAAATCTTGGAGCATGTCTGTGGCAAATGCTACAAAACATTCCGTCGTGTTAAAAGTCTCCTGAAGCATATAGAATTTTGTCGCTATGACAGTGGCTATCATTTGCGTAAGGCAGAGATGATAAAGAACTTGGAGAAAATCGAAAAGGATGCTGCCATTATGGAGAAGAAAGATATCTGCTTCTGTTGCAGTGAGAGCTATGATACATTTCATCTTGGGCACATTAATTGTCCCGATTGTCCGAAATCATTCAAGACGCAAGAAAGCTATGAGCgccatatttttattacacattCGGAATTCCAAGACTATCCTTGCTCCATATGTAATGCCAAATTACGTAGTAGCACATTGCTAGAACTACACGAAGAGCAGCATAGAAATCGTGGAAAACCATTTGCATGTAAAATCTGTGGCAAGGATTTTACCCGTCATTACCATCTAAAACGCCACCAAAAGTATTCATCATGCTCAACCAATGACAATGATACATTGAGCTGCAAGGTATGCGGTAAGGTTTTCTATCGATTGGATAACTTGCGTGCCCATTTGAAGCAACATATTGGAACGCAAGTTACAAAGAAACCGGAATACATGTGTCATGTATGCAAGAATTGTTTCTACAGTTTGTCTACCTTAAACATACACATTCGAACACACACTGGAGAAAAGCCATTTGACTGTGATCTGTGTGAAAAGAAGTTTTCAGCTCTGGTCGCACTAAAGAAACATCGTCGCTATCATACTGGAGAGAAACCATACACTTGCACTGTGTGTAACCAATCATTTGCCGTCAAAGAAGTTCTGAATCGCCATATGAAACGTCATACCGGCGAACGTCCACATAAATGTGATATATGTAACAAGAGTTTCATTCAAGCGACACAGTTGCGTACACATGCAAAGACCCATTTAAGGCCATTTGCCTGTTCCATATGCGATGATAAGTATAAAACTCAAAAGCAATTAGATCGTCACGTCAAAGAGCACTCACGCTCAAaacgaaacaagaaaattacatTCGGTTGCACTACTTGTACACTTACTTTTAGTAATCAACATCAGTTAGACGAACATAACGAGAAAGGTGAACACAAAGaacCCACTAAACGCATGAAACGTAACAAGGTCAACGATCGCAGAGATTGTGCAATTTGCGATAAGATTTTCGATACGACAGACGATCTACGTAGTCATATTCTTAAAGTCCATGAATGTGATCCAGATGACATATTTGGTGAAAAGCCACCAGAAGCTAAGCAAGAGCCCGATGATTCGCCAAAATCGAAACGCGGGAAACAATCTAAAAAAGCGTCACCAGTTGCTTCTGCCGTTGCTGCTTCTGGAAATAAACTGATTTCAACTAATCAGGAAAATGGTTTAGTTGTACGTGAATTTCTTGTCGACGAAATTCCAGCTGTTGGCTCAAGTGCACAACAAACTATTATATTGCGGAATGAAACGTACACTATTGTCCAAATTGATGCCGATTCCGAAAACAATGATTCCAAGCCCAGTGTTTCAAgtgaaactaaacaaaaactttcACCGATTGTAAAGAAAGAACAACGCAAATCTTTGGCAGCCAGTTTAGCTGCTGCTATTGCGGACAATGAAGATGTTGTGTTAAGTGAAGATGAAAACTCGGATGAAATGACAGAAGAAGACTCAAAACTTAAAGATAATGTGTCCAAATTATTGGATATGTTAGTAGATAATTCTACACTAAAGAAATTTGGTTGGCCTGAAACATCAGAAGAAATCGTTTTATGCAAAGTTATTGAAAATTGCGGCCACGAGCTAtctaatgataatgaaaactATCGTCAACTTGATTATGGAACTCGCATGCgtgaatatttgaaattattgttcaAACTGGTGATACACAATGATTCCATTAAGGAATTATTAAACAACTACCCGATTGATGAAGTCATAGAATACGTTTTAggtgatgaggatgatgataataatgatggaaATGGTGACGAGGAGGAAATCGAGGATAATTTAAAGTAG
Protein Sequence: MSKSAVEPAAAGSERAKRSSASGVKILNDEKISPSPAKGSTLSIAKRKLAATKKSQSHYVLQTVKNESNNTTGGGTVISLTDDDAINIVLAENNDEENAVTSKIGRRTGEITEEFHISGEEGDGENDRVKEILEHVCGKCYKTFRRVKSLLKHIEFCRYDSGYHLRKAEMIKNLEKIEKDAAIMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQESYERHIFITHSEFQDYPCSICNAKLRSSTLLELHEEQHRNRGKPFACKICGKDFTRHYHLKRHQKYSSCSTNDNDTLSCKVCGKVFYRLDNLRAHLKQHIGTQVTKKPEYMCHVCKNCFYSLSTLNIHIRTHTGEKPFDCDLCEKKFSALVALKKHRRYHTGEKPYTCTVCNQSFAVKEVLNRHMKRHTGERPHKCDICNKSFIQATQLRTHAKTHLRPFACSICDDKYKTQKQLDRHVKEHSRSKRNKKITFGCTTCTLTFSNQHQLDEHNEKGEHKEPTKRMKRNKVNDRRDCAICDKIFDTTDDLRSHILKVHECDPDDIFGEKPPEAKQEPDDSPKSKRGKQSKKASPVASAVAASGNKLISTNQENGLVVREFLVDEIPAVGSSAQQTIILRNETYTIVQIDADSENNDSKPSVSSETKQKLSPIVKKEQRKSLAASLAAAIADNEDVVLSEDENSDEMTEEDSKLKDNVSKLLDMLVDNSTLKKFGWPETSEEIVLCKVIENCGHELSNDNENYRQLDYGTRMREYLKLLFKLVIHNDSIKELLNNYPIDEVIEYVLGDEDDDNNDGNGDEEEIEDNLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00061326; iTF_00062160;
90% Identity: -
80% Identity: -