Amar031146.1
Basic Information
- Insect
- Amiota mariae
- Gene Symbol
- hang
- Assembly
- GCA_035041805.1
- Location
- JAWNKV010000923.1:73469-89808[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.07 9.1 7.9 1.0 2 23 265 287 265 287 0.94 2 17 0.035 4.5 8.9 2.9 2 22 378 398 377 398 0.91 3 17 0.2 25 6.5 4.9 1 23 469 492 469 492 0.91 4 17 0.0013 0.17 13.4 0.2 3 23 640 661 639 661 0.96 5 17 0.00029 0.038 15.4 0.2 1 23 669 692 669 692 0.97 6 17 0.00018 0.024 16.0 0.1 2 23 789 810 788 810 0.97 7 17 0.00043 0.056 14.9 2.4 2 23 887 909 886 909 0.95 8 17 0.023 3 9.4 0.8 2 23 918 940 917 940 0.95 9 17 0.0015 0.2 13.1 0.1 1 23 953 976 953 976 0.98 10 17 0.0013 0.17 13.3 1.1 1 23 1049 1071 1049 1071 0.99 11 17 0.0021 0.27 12.7 0.9 1 23 1079 1102 1079 1102 0.96 12 17 0.00014 0.018 16.4 0.2 3 23 1221 1241 1220 1241 0.97 13 17 3.4e-05 0.0044 18.3 0.5 1 23 1276 1298 1276 1298 0.97 14 17 9.4e-05 0.012 17.0 0.8 2 23 1373 1395 1372 1395 0.93 15 17 0.18 24 6.6 0.2 2 20 1415 1433 1414 1435 0.91 16 17 0.43 55 5.4 1.2 3 23 1450 1470 1450 1471 0.95 17 17 0.00076 0.099 14.1 0.7 3 23 1810 1830 1808 1830 0.98
Sequence Information
- Coding Sequence
- ATGTTTCGTGAGGCGAATTGTCTAGTCTATGTGGTGATATCAATAAGTGATCGACTATCGTTAAATATTTGTCACGCATGCATTAGTTACCTGAACTCATGGCAAAGTTTCAAGAATCGTTGTGCTTCAGCTCAAGCTAAGCAACACAATTGGCTGGATGCatctaaacaacaacaattgttggACAATAACGTGAGCATTTCGGAAGTACATAATATCAGTGGCAGCATaagtagcagcaacatcaataataataacaacaataataataataatactagtAGCAACAATATTAGCTTCGGAGAGAATTGtgaacaacagcagcaacgagaccagcagcagcagcatcatcatcatcatctagaTAACGATGAACTGGAACAGACGGCGGATGGCttacaacaatcaacaacatccACAGCAACTGGGAcgacaccatcatcatcctcaaACATTTTGGAAGGCATAACATCGTtgaaaaaacgaaaatcatTAACAGTTTATCCACTGCCAGCCATTAAAGATGAACCATTGGAAtcagatgattatgatgaataTGGTGTGCCTAAGAATCAGCATGACGAATCTGATGAAATGGTCGATGCAACATTATTTTTGGAACGTGTCGACCACGAGGATGATACACCCATTATGGacggcggtggtggtggtggtagtggtagtggttATGATTATAACGCACATCGTACAACTCCCGCTGTTGTAGCAGCAGCATCTCTACCACCAGCAACTGTGGCTAATGTAGCGGCTGCTGGTGATACAAAAAACGCACAATGTCGTGCCTGTAATTTACAATTCTCGACACGTGCCAATGCACGTCGCCATGAACGTAATCTACATCCGAATCTCTTTGAGCTTTCCACAGAATCACCAAATAATACATTAATAACAAAGCCAACAGCAGCATTGGCTGCTGCTTCTGGCACTGCAACGAGCAGCGGTACAATATCATCACAAAAATATCGTCAGGAagttttgaatgcattcatcAAATGTGAAGGTGGCGGCTATGATTATAATAGTCcagaaaaatatcaacatttGCTCACCGAAGAGAAGATCGCctttataaatcaatttaatgattttctcGAACAATATCAGGAAATGAAATGTCGTTGTTGTAATAAAACATTCCcaacttataaaaatttcatggCTCACATTCGTAAGAAGTATCCAATGCTGCCACGGAATTTATGCTTTAATTGTCTGAAACAAAACGAATCGAAAGCACTGTTTATATCCCATCTAAAGAAACGCAATTGCATCAACTTATTCCGTCTACTAAATAATATGCTACagaaaaatccaaattttGCTGCCGTATCTAATCCGACACCGGAACGTATGCGCGCCAAGGAGttgttaattaataaaatgtacgAATGTAAATTGTGTCCTGATCATTTTCGTACAAAACATGAATTCCGTACCCATGTTTATGAACGTCATGCCGATGTTCAACGTAAAGACAATGCATCGATTCAATGTAGTTTTTGTAGTTTGGAAATTATTGATCCTGTCGATCGTAAACGTCACTACAATAATATGGATTGCATTGTGTCATTACGTTGTGTCACCTGCAAAAGTAAATTTGATAATCACCAACACTTCTTGGAGCATGTCTATCAAGAGCATTTGGGTGGCATGAGCGACAATTCGTCAACAATAAGTGGTGGACGTCAAGTGTCAGGTTTAGACAATTCATCTAAAGGAAAACGCAGCCTAAGCTTAAGTGGAGCTGctattggtggtggtgGCGTTTCATCAAATGATGAGTCACATAGCAGTCTTGGTCATGCACTAACATCAACGCCAGTCACTGGCAGCAGCGGTGGAACTAATCAACCACCAGCAGCTAaatcacaatatttttcacGTATGCCACAAGCTTGTCCCATTTGTGgtcaacaatataataattataataatgtcCTACGTCATATGGAATCTAAGCATCCGGATAATTTACCAGAAACATATAAATGCGTGCGTTGCAGCACTGGTTTTCCACGTATCTCGAATTTACGCGAACATATGATAAGTGCGCATGGCGCTGATCGGAATCGTGTCTCCGGTGGGTTCGAGTATATTGTGAATGCGGACGCGTTAAAGTTGATTGACGGTGGCCCGCCAAATGCTTATACCGGTCGTTATGATTACGTCATGAAAGATTTGATGTCAATTAATGGTGGGACACTCGacgatgacgatgatgatatgGATAATCAATCTTCGAAACGTATGCGTTTGGATACATCAATTGGTGGCGGCACAGCGAgcggcagcaacaacaatgctgcAGCAACCTCATCAAATAACCTATTATCGAGCCAAAAAGAATGTCCAGTTTGTTCAgctgtttttaataataatattggtcTATCGAATCATATGCGTTCCCATACAGCGGCCGCTGCAAATGCAGCTGCATTGGCGGTTGCCAATCgcataacaaataaatcattGACTGTGACTGCGACATCTACACCGcaaacatcaaaaacaacGGTTTCATCAGTAGCTGCTTCATCATCGcatgaatcaatcaatatatCACCACCGACTGCAGAGCAGCAAGCACTTTATCGACGTGGTTTCGAGCAGGCAGCTGACCGTCGATTTCGTCGTATGCGTTGCCAAATCTGTCAGCGACGTTTCTCATCAAAGAAATCATATCGTTATCATATGTTAAATGAACATCAAATTCGCAATGTACAATTTATCAAATGTAAACTATGTAATGCCGATTTTGCTCATGAGAAGGGTCTCAAAGTGCATCTTTTTAAGGTGCACAATACATTGATTAAGGATGAAATGATTATAAAGCAATTTGAATGCGATATTTGCTCAGTCGTTTATACATCGGAAGTGGATTTATTACAGCACAAAAAGACTGTACATGGTGCTGAAGATGCACAACTGCATGATGTCGATATGGATGAGTCAAAGGCGAATGTATCAAATCTCGATACATCGTCGTTTATTGGCACCGATCAACATAAAGTGCGCATGTCAACACCAAATGCAtcccaacatcatcatcatcaccattctcaccatcagcagcagcagcatggAAATACGACAGGTGATGGGGTTCCTGGTCCTCTATATTGGTATCAATGCAAATATTGCGCTTCGAACTTTAATACTAATAAGAAATTGGCCATTCACATTAATTCACATGATGAATTCGATTCTAAGGATTATTCATGCAAGGATTGCGGCAATGTTTATAGTGGTCGTAAAAGTCTTTGGGTACATCGCTATAAGAAACATCCTCAAATAGCTGATCCCTCAGAATGTTTGCTTTGCTGTAAGATCTTCTTTGATCGGCAAATGTTAGAGAATCATACACCAACTTGTAATCGCAAACCTATTACAGCTACAGGCGCTCAAGCGGAAAGCACTGCTGCTGTATTGTCATCAAGACAATATTTTAAGCACAAAactggtgatgatgaagatgaagaagatgataaTGGAAATAGCGATagtaatggtggtggtggaacTGTTGTTGGCACTTTGGGTGGCGGTGAAGTGGAAGTCTCAACAATGCCTACAATGTCTACTGTTGTTGCTACATCATCGACAACAAAGTCACGTAATTTCAAAATGCCCGAAGTGGCATGCACAATTTGTGGTGCACGATTCACAGATCAAGAATTATTCTCCAAACACATTGAAAGGCATGAACGAGAATTATATACAGATAATCCACTTGCGGCCATGTTCGATGATGGACCATCTGAtccaaatcaattttatttggatcGTGTCAATGATAACGGCGAGTACGCTTGCGATCTATGCGACAAAACATTTACCCAGATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAACAAACAGAACCAGGTCGACGGCGATCTGGCAGCATATGCTctgaccaacaacaacaacagcagcagcaccagcaacaaTCAACACAACAGTTCACTATCGTCAATGAAGAACATCCAACCACATCTACAGGAATTACATGCAGTCGGTCTAATGCCAAATCATCAACGAGAACACCAAATCAGAACCCTGAAACGCAAACGGGAACTGAAATGCCAATATTGCCCCTCGACATTTATCAGCAACAATAATCTTCGTCGTCATATGTATGAATTGCATAAGAACGAGGTGAGCAATTTGCCAGAGCCACCGAAAATAGTTATTGATGAACCATTGTCGTGTCGTCGCTGTGATTTGAAGTTTAAAACTAGAGATGAATGGATCGAACATAAGGTTACCGATGCTCGTACAATGCGTCCATATGGGCCATTCCAATGGGGTTGTGACTTATGCGGAGACTATGTTTCACGCaaagagaaattaataaatcatctaaataatcatcataaggAGGGCATCGTTTTGCCCATTcctaaaaagaagaatgatgttgttgttgaagatgaagaagagcATGAAGAGGAAATTAAGCAATCATCAAGGGTCATTTTAAAGAGGGGTGATGAATCAAATAATCCTCAAAGTGATGATAATAACACAATGATGCCTGGTGATATTGAAGattatgatgaagatgatgatgttgctgatttCATCGAAGAAGACGATGACGAAGACGACAATGAAGATGAAGCTGATGATGCTGAAGGCGAACGCGAAGGCGAAGGTGTTCCTAAAAGTGATGGTGTCGAGAATGACAATGGCGTTGGccacgatgatgatgatgacgatgatgtcgAAGACGATGGTGACGACGATggcgatgatgttgatgattacATTAATACAGAGACTGATACTGTTCCAGTCAATGTTCATGACAACGATGGAGATACCACCGATGAagatgatggcgatggcgacgGTGCCGATGATGAAGACGAAGACGATGATGGTAATGAACGTGCAGAAAATACCAACATTGACCGTCAGCATCAGTTAAGAGATGAAACCACCAATGTATCTCCTATGATTAATAATGTTGATATGATGGTCAGGAGGGAAACTGATGAAGAGGACTTCAACGGTTTCTCACTAGATGACACGACTACATCAGCAACTAATGGTGTTATTTCACCATTAggcagaaacaacaacaataacaacaataataacaacaataacaacagcaacaccaacaacaacaccatcaacaacaccagcaacaacaccaacaatgcGAATAGTGACAGCTCAAGTGATagcagtgatgatgatgaatctgGTGGCACTAGTGATGCATCCTCAGGTTCCACTAATTCAAcaaccacatcatcatcatcagaaaaCACGGGTGAGAGGCGTAAGCATAAATCAagatcatcagcagcagcaagagcCAAAGGAGCGAAAAAAAcagatgctgttgctgctgctaatCAGGTTAAGTCCCCTTTTGGTTGTGATCTATGTCATGTTTCTTTCGATTCACAGCCGGAACTTCAGAAGCATGTTAAGATGCATTTTCTAAATGGGCCTGGCTCTGTAACTGTAACAAATTCGTCCTCGCCCTTTTCCATATCCTCCTCACCACAAAAGAGCAGCACAACAAAAGATGATGGTGGTTCACCTTCTACTAAATCCACAAAATCCGTTGGTTAA
- Protein Sequence
- MFREANCLVYVVISISDRLSLNICHACISYLNSWQSFKNRCASAQAKQHNWLDASKQQQLLDNNVSISEVHNISGSISSSNINNNNNNNNNNTSSNNISFGENCEQQQQRDQQQQHHHHHLDNDELEQTADGLQQSTTSTATGTTPSSSSNILEGITSLKKRKSLTVYPLPAIKDEPLESDDYDEYGVPKNQHDESDEMVDATLFLERVDHEDDTPIMDGGGGGGSGSGYDYNAHRTTPAVVAAASLPPATVANVAAAGDTKNAQCRACNLQFSTRANARRHERNLHPNLFELSTESPNNTLITKPTAALAAASGTATSSGTISSQKYRQEVLNAFIKCEGGGYDYNSPEKYQHLLTEEKIAFINQFNDFLEQYQEMKCRCCNKTFPTYKNFMAHIRKKYPMLPRNLCFNCLKQNESKALFISHLKKRNCINLFRLLNNMLQKNPNFAAVSNPTPERMRAKELLINKMYECKLCPDHFRTKHEFRTHVYERHADVQRKDNASIQCSFCSLEIIDPVDRKRHYNNMDCIVSLRCVTCKSKFDNHQHFLEHVYQEHLGGMSDNSSTISGGRQVSGLDNSSKGKRSLSLSGAAIGGGGVSSNDESHSSLGHALTSTPVTGSSGGTNQPPAAKSQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDNLPETYKCVRCSTGFPRISNLREHMISAHGADRNRVSGGFEYIVNADALKLIDGGPPNAYTGRYDYVMKDLMSINGGTLDDDDDDMDNQSSKRMRLDTSIGGGTASGSNNNAAATSSNNLLSSQKECPVCSAVFNNNIGLSNHMRSHTAAAANAAALAVANRITNKSLTVTATSTPQTSKTTVSSVAASSSHESINISPPTAEQQALYRRGFEQAADRRFRRMRCQICQRRFSSKKSYRYHMLNEHQIRNVQFIKCKLCNADFAHEKGLKVHLFKVHNTLIKDEMIIKQFECDICSVVYTSEVDLLQHKKTVHGAEDAQLHDVDMDESKANVSNLDTSSFIGTDQHKVRMSTPNASQHHHHHHSHHQQQQHGNTTGDGVPGPLYWYQCKYCASNFNTNKKLAIHINSHDEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQIADPSECLLCCKIFFDRQMLENHTPTCNRKPITATGAQAESTAAVLSSRQYFKHKTGDDEDEEDDNGNSDSNGGGGTVVGTLGGGEVEVSTMPTMSTVVATSSTTKSRNFKMPEVACTICGARFTDQELFSKHIERHERELYTDNPLAAMFDDGPSDPNQFYLDRVNDNGEYACDLCDKTFTQMTALKVHRKWHFRGDNKQNQVDGDLAAYALTNNNNSSSTSNNQHNSSLSSMKNIQPHLQELHAVGLMPNHQREHQIRTLKRKRELKCQYCPSTFISNNNLRRHMYELHKNEVSNLPEPPKIVIDEPLSCRRCDLKFKTRDEWIEHKVTDARTMRPYGPFQWGCDLCGDYVSRKEKLINHLNNHHKEGIVLPIPKKKNDVVVEDEEEHEEEIKQSSRVILKRGDESNNPQSDDNNTMMPGDIEDYDEDDDVADFIEEDDDEDDNEDEADDAEGEREGEGVPKSDGVENDNGVGHDDDDDDDVEDDGDDDGDDVDDYINTETDTVPVNVHDNDGDTTDEDDGDGDGADDEDEDDDGNERAENTNIDRQHQLRDETTNVSPMINNVDMMVRRETDEEDFNGFSLDDTTTSATNGVISPLGRNNNNNNNNNNNNNSNTNNNTINNTSNNTNNANSDSSSDSSDDDESGGTSDASSGSTNSTTTSSSSENTGERRKHKSRSSAAARAKGAKKTDAVAAANQVKSPFGCDLCHVSFDSQPELQKHVKMHFLNGPGSVTVTNSSSPFSISSSPQKSSTTKDDGGSPSTKSTKSVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00062996; iTF_00061373;
- 90% Identity
- -
- 80% Identity
- -