Acom006838.1
Basic Information
- Insect
- Amiota communis
- Gene Symbol
- hang
- Assembly
- GCA_037043315.1
- Location
- JBAMAV010000556.1:1104043-1125665[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.075 8.8 7.8 1.0 2 23 288 310 288 310 0.94 2 17 0.032 3.7 9.0 2.8 2 22 416 436 415 436 0.91 3 17 0.21 25 6.4 4.9 1 23 507 530 507 530 0.91 4 17 0.0014 0.16 13.3 0.2 3 23 678 699 677 699 0.96 5 17 0.00031 0.037 15.3 0.2 1 23 707 730 707 730 0.97 6 17 0.0002 0.023 16.0 0.1 2 23 830 851 829 851 0.97 7 17 0.00071 0.084 14.2 2.3 2 23 935 957 934 957 0.95 8 17 0.014 1.7 10.1 0.7 2 23 966 988 965 988 0.95 9 17 0.001 0.12 13.7 0.1 1 23 1001 1024 1001 1024 0.98 10 17 0.00014 0.017 16.4 1.1 1 23 1105 1127 1105 1127 0.99 11 17 0.0022 0.26 12.7 0.9 1 23 1135 1158 1135 1158 0.96 12 17 0.00013 0.015 16.6 0.8 2 23 1279 1300 1278 1300 0.97 13 17 7.7e-05 0.0091 17.2 0.5 1 23 1335 1357 1335 1357 0.97 14 17 0.00034 0.041 15.2 0.8 2 23 1442 1464 1441 1464 0.92 15 17 0.23 27 6.3 0.2 2 20 1484 1502 1483 1504 0.91 16 17 0.016 1.9 10.0 1.5 3 23 1519 1539 1519 1540 0.96 17 17 0.00081 0.096 14.0 0.7 3 23 1892 1912 1890 1912 0.98
Sequence Information
- Coding Sequence
- ATGGTTGTTCCAATATTGAGGCGTCACTGTCGATGCCGATGCCGCTGTCACCATCAAGCAAGATCAACAATAAAACAGGGCATCAATAGCACAGCGGTGATCTACAATTTGGAGAATGTTGTACAGCGTCTCTCATCGTCACCGTCACCATTGTCGATATCAATAAACGATCGTCTATCGTTGAATGTTTGTCACGCATGCATTAGTTACCTGAATTCTTGGCAAAGTTTCAAAAATCGTTGTGCTTCAGCTCAAGAAAAACAACTCAATTGGCTGGACACatctaaacaacaacaattgttggaCAATAACGTGAGCATTTCGGAAGTACACAATAtcagtggcagcagcagcagcaataattataacaacaacaataataataataatacgagtagcaacaatattaatttcgGAGAAAATGGAGAACAACAgatacagcagcagcaacaccatcCAGACAACGATGAACTGGAACAGACGGCGGAAGGTTTACAACAATCAACACCACCCACAGCATCAGGGACATcatcttcaaatattttggaggGCATAACATCATTGAAGAAACGAAAATCATTAACAGTTTATCCACTGCCAGCCATTAAAGATGAACCCTTGGAATcagatgattatgatgaataTGGTGTCCCTAAGAATCAACATGACGAATCTGATGAAATGGTCGATCCAACATTATTCTTAGAACGTGTCGACCACGAGGAAGATACACCCATTATGGATGGTAGTGGTGGTTATGATTATAGCGCACATCGTACAGCTCCAGctgtagtagcagcagcatctTTACCACCAGCAACTGTTGCTAATGTAGCGGCAGCCGGTGATACAAAAAACGCACAATGTCGTGCCTGTAATTTACAATTCTCGACACGTGCCAATGCACGTCGTCATGAACGTAATCTACATCCGAATCTCTTTGAGTTGTCCACAGAATCACCaaataatacattaattaCCAAGCCAACAGCAGCATTGGCTGCTGCTTTAGCACTGCAACGTGCAGGTGGCGCTGGTTCAACTATAAACGAAGTATCAAAATCTGTAGCCAGTGGTACAATAACATCACAAAAATATCGTCAGGAAGTTTTGAATGCATTCAACAAATGTGAAGGTGGCGGCTATGATTACAATAGTCCagaaaaatatcaacattTGTTGACCGAAGACAAGATCGCCttcataaatcaatttaatgattttctgGAACAATATCAGGATATGAAGTGTCGTTGCTGCAATAAATCATTCCCAACATATAAGAATTTCATGGCTCACATTCGTAAGAAGTATCCAATACTGCCACGTAATTTATGCTTCAATTGTCTCAAACAAAATGACTCGAAGGCATTGTTTATATCCCATCTAAAGAAACGCAATTGCATTAACTTATTCCGTCTACTAAATAATATGCTACAGAAAAATCCAAATTTTACTGCCGTTTCTGTACCGACACCGGAACGTATGCGTGCGAAAGAGttgttaattaataaaatgtacGAATGTAAATTGTGTCCCGATCATTTTCGTACAAAACATGAATTCCGTACCCATGTCTATGAACGGCATGCCGATGTTCAACGCAAAGACAATGCATCGATTCAATGCAGTTTTTGTAGTTTGGAAATTGTTGATCCTGTCGATCGTAAACGCCACTACAATAATATGGATTGTATTGTGTCGTTACGTTGTGTCACATGCAAAAGTAAATTTGATAATCACCAACACTTCTTGGAACATGTCTATCAAGAGCATTTGGGTGGCATGAGCGATAATTCGTCGACAATAAGTGGTGCACGTCAATCGTTAGataattcatcatcatctaaagCAAAACGCTCTTTAAGCTTAAGTGGTGCTGGTGGTCTCGGTGGTGGCGTTTCATCAAATGATGAGTCACATAGCAGTCTTGGTCTTGCCCTAACATCAACGCCAGTTACTGGCAGCAGCGGTGGAACTAATCAACCACCAGCAGCAAaatcacaatatttttcacGTATGCCACAAGCTTGTCCCATTTGTGgtcaacaatataataattataataatgttcTACGGCATATGGAATCTAAGCATCCGGATAATTTACCAGAAACATATAAATGCGTGCGTTGCAGCACTGGTTTCCCACGTATTTCTAATTTACGCGAACATATGATAAGTGCGCATGGCGCTGATCGGAATCGTGTATCCGGTGGGTTCGAGTATATTGTGAATGCGGACGCGTTAAAGTTGATTGACGGTGGCCCGACAAGTTCTTATACTGGTCGTTATGATTACGTCATGAAAGATTTGATGTCAATTAATGGTGGGACACTCGacgatgacgatgatgatatgGATAATCAATCTTCGAAACGTATACGTTTGGATCCATcaattggtggtggtggcggcggcaCAGGAAGCGGTAGCAGTAATAACAATGGCGCCTCATCATCTAATAATCTATTGTCGAGCCAAAAAGAATGTCCAGTTTGTTCGgctgtttttaataataatattggtCTATCGAATCATATGCGTTCCCATACAGCGGCCGCTGCAAATGCAGCTGCTATGATGGTTGCCAATCgcataacaaataaatcaCTGACTGTGACAGCAACCACATCtacatcaccatcaacaacaaaatcaatggTTTCATCAGgagctgctgctactgctgctgcttcatCATCGCACGATTCTTTGAATACAACACCACCGACTCCAGAGCAGCAAGCGCTTTATCGACGTGGTTTCGAACAGGCAGCTGACCGTCGTTTCCGTCGTATGCGTTGTCAAATTTGTCAGCGACGTTTCTCATCAAGGAAATCATATCGTTATCATATGttaaatgaacatcaaatCTGCAATGTACAATTTATCAAATGCAAATTATGTAATGCCGATTTTGCTCATGAAAAGGGACTTAAAGTGCATATTTTTAAGGTGCACAATACTTTGATTAAGGATGAAATGATTATCAAGCAATTTGAATGCGATATCTGCTCAGTAGTTTATACATCGGAAGCGGATTTATTACAACACAAAAAGACTATACACGGTGCTGAAGATGCACAACCAAATGATATCGATATGGAAGAGTCAACGGCAACTGTAGACGCATCTCCATCGTCGTCGTTGAACATGGAGAATAATCAACTTAAAATGCGCATTTCAAACCCAAATGCTGGCacccaacatcatcatcgtcaccatcatcatcatcaccaccatcatcatcagcagcagcagggaAATACAGCGATATCAGGTGATGGTGTTACTGGACCACTGTATTGGTATCAATGCAAATACTGCCcttcaaattttaatactaATAAGAAATTAGCCATTCACATCAATTCTCATGATGAATTCGATTCTAAAGATTATTCATGCAAGGATTGCGGCAATGTTTATAGTGGTCGTAAAAGTCTTTGGGTGCATCGTTACAAGAAACATCCTCAGATAGCTGATCCCTCTGAATGTGTGCTATGCTGTAAGATCTTTTTCGATCGTCAAATGTTAGATAATCATATACCAACTTGTAATCGCAAACCAATAACTGCTACAGGCGCTCAAGCAGAAAGTGCTAATGCTGTTATGacaccgtcatcatcatcaagaacctattttaagcataaaactggtgatgatgaagatgatgaagatgttaaTAGTGATAGTAATGGTGGTGGAGGTGTTGGAACTGTTGTTGGCACTTTGGGTGGCGGTGAAGTGGAAGTATCTACAATGCCTACAATATCTACTGTTGCACCGACATCAACAAAATCGTCACGTCATTTCAAAATGCCCGAAGTGTCATGCACAATTTGTGGTGCACGCTTTATAGATCAACATCTATTTACCAAACACATTGAAAGGCATGAACAAGAATTATATACAGATAATCCACTTGCGGCCATGTTCGATGATGGACCTTCGGAtccaaatcaattttatttggatCGTGTCAATGATAACGGCGAGTACGCTTGTGATCTATGCGACAAAACATTTAACCAGATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAACAAACAGAACCAGGCCGACGCCGATCTGGCAGCATATGCTatgaccaacaacaacaacagcagcagcaccagcagcagcaacaatcaacaacaacacaacaattcaCTATCGTCAATGAAGAACAACATCCAACCACATCTACAGGAATTACATGCAGTCGGTCTCATGCCAAATCATCAACATCCATCAATGCAACGAGAGCATCACATCAGAACCCTGAAACGCAAACGGGAACTGAAATGCCAATATTGCCCCTCGACCTTTATCAGCAACAATAATCTGCGTCGTCATTTGTATGAATTGCACAAAAACGAGGTGAGCAATTTGTCAGAGCCACCTAAAATCGATATAGATGAACCATTGTCGTGTCGTCGTTGTGATTTGAAGTTTAAAACCAGAGACGAATGGATCGAACATAAGGTCAGCGATGCACGTACAATGCGTCCATATGGACCATTCCAATGGGGTTGTGACTTATGCGGACAATATGTTTCGCGCAaagagaaattaataaatcatcttaataatcatcataagGAGGGTATTGTTTTGcctattgctgctgctggtggtaGCAGTGGCAGTGGCAGTGTCAATACCAGTGTCAGTGTCAGTCCtaaaaagaataagaataataatgatgatgatgatgcagaaaaagaaaaggatgaaaaagaaactaaacaaTCACCAGACGATATTTTAAAGAAGGGTGAAGATTCAAATAGTCCTCAAAGTGATGATAATAACTCAATGACGCAAGGTGATATTGAAGATTCTGATGATTTCATTGAAGAAGAggatgaagaagatgatgatgatgatgacgacgacgacgacgacgagaATGATGAAGGTGTTCCTAAAAGCGATGGTGTCGAGGATGGCAATAATGGCGTTGGTCatcacgatgatgatgataatgatgacgacgatgatgaggatgatgatgttgaagacGATGGTGACGATGATGGCGATGAGGTGTTTTCTTTCATGAATACAAGGACTGATAAAGCTGGTTCAGTCAATGTTCATCACAAAAACAATGGCGACGACACCAGCGATGCCGATGGCGAAGCCGATGATGTTGAAGACgacgatggcgatggcgatggtAATAAAGGTCAAGAAAATAATGTCAATGAAGTATCTTCTACAagcattgatgatgatgatacaatGGTGAAGAGGGAAAGTGACGATGAGGACTTTACCGGTTTCTCACCAAATGATGAAGGCAATCATCATGATAATGAAACTAAACCGAATATATCAGCAACTAATGGCGTTGACTCACCATTaggcagcaacaataacaacaatatcacaagcaacaacaacaacaacaacaacaacaatgcgaACAGTGATAGCTCAAGTGATAGTAGTGATGATGACGAATCGGGTGGCAGTAGTGATGCATCGTCAGGTTCTTcgaattcatcatcatccacatcatcatcagaagaaAACACGGGTGAGAGGCGTAAGCATAAATCAagatcatcagcagcagcaagagCCAAAGGAACGAAAACAAcagatgctgttgctgctgctaatCAGGTTAAGTCACGTTTTGGTTGTGATCTATGTCATGTTTCTTTCGATTCACAGCCTGAACTTCAGAAGCATGTTAAGATGCATTTTCTAAATGGTCCTGGCTCTGTAACTGTAACAAATTCGTCCTCGCCCTTTTCCACCTCCTCCTCCTCACCACAAAAGAGCAGCACAACAAAAGATGATGGATCGCCCTCTACTAAAtccacaaaatcaaaaacaaccATTGATTAA
- Protein Sequence
- MVVPILRRHCRCRCRCHHQARSTIKQGINSTAVIYNLENVVQRLSSSPSPLSISINDRLSLNVCHACISYLNSWQSFKNRCASAQEKQLNWLDTSKQQQLLDNNVSISEVHNISGSSSSNNYNNNNNNNNTSSNNINFGENGEQQIQQQQHHPDNDELEQTAEGLQQSTPPTASGTSSSNILEGITSLKKRKSLTVYPLPAIKDEPLESDDYDEYGVPKNQHDESDEMVDPTLFLERVDHEEDTPIMDGSGGYDYSAHRTAPAVVAAASLPPATVANVAAAGDTKNAQCRACNLQFSTRANARRHERNLHPNLFELSTESPNNTLITKPTAALAAALALQRAGGAGSTINEVSKSVASGTITSQKYRQEVLNAFNKCEGGGYDYNSPEKYQHLLTEDKIAFINQFNDFLEQYQDMKCRCCNKSFPTYKNFMAHIRKKYPILPRNLCFNCLKQNDSKALFISHLKKRNCINLFRLLNNMLQKNPNFTAVSVPTPERMRAKELLINKMYECKLCPDHFRTKHEFRTHVYERHADVQRKDNASIQCSFCSLEIVDPVDRKRHYNNMDCIVSLRCVTCKSKFDNHQHFLEHVYQEHLGGMSDNSSTISGARQSLDNSSSSKAKRSLSLSGAGGLGGGVSSNDESHSSLGLALTSTPVTGSSGGTNQPPAAKSQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDNLPETYKCVRCSTGFPRISNLREHMISAHGADRNRVSGGFEYIVNADALKLIDGGPTSSYTGRYDYVMKDLMSINGGTLDDDDDDMDNQSSKRIRLDPSIGGGGGGTGSGSSNNNGASSSNNLLSSQKECPVCSAVFNNNIGLSNHMRSHTAAAANAAAMMVANRITNKSLTVTATTSTSPSTTKSMVSSGAAATAAASSSHDSLNTTPPTPEQQALYRRGFEQAADRRFRRMRCQICQRRFSSRKSYRYHMLNEHQICNVQFIKCKLCNADFAHEKGLKVHIFKVHNTLIKDEMIIKQFECDICSVVYTSEADLLQHKKTIHGAEDAQPNDIDMEESTATVDASPSSSLNMENNQLKMRISNPNAGTQHHHRHHHHHHHHHHQQQQGNTAISGDGVTGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQIADPSECVLCCKIFFDRQMLDNHIPTCNRKPITATGAQAESANAVMTPSSSSRTYFKHKTGDDEDDEDVNSDSNGGGGVGTVVGTLGGGEVEVSTMPTISTVAPTSTKSSRHFKMPEVSCTICGARFIDQHLFTKHIERHEQELYTDNPLAAMFDDGPSDPNQFYLDRVNDNGEYACDLCDKTFNQMTALKVHRKWHFRGDNKQNQADADLAAYAMTNNNNSSSTSSSNNQQQHNNSLSSMKNNIQPHLQELHAVGLMPNHQHPSMQREHHIRTLKRKRELKCQYCPSTFISNNNLRRHLYELHKNEVSNLSEPPKIDIDEPLSCRRCDLKFKTRDEWIEHKVSDARTMRPYGPFQWGCDLCGQYVSRKEKLINHLNNHHKEGIVLPIAAAGGSSGSGSVNTSVSVSPKKNKNNNDDDDAEKEKDEKETKQSPDDILKKGEDSNSPQSDDNNSMTQGDIEDSDDFIEEEDEEDDDDDDDDDDDENDEGVPKSDGVEDGNNGVGHHDDDDNDDDDDEDDDVEDDGDDDGDEVFSFMNTRTDKAGSVNVHHKNNGDDTSDADGEADDVEDDDGDGDGNKGQENNVNEVSSTSIDDDDTMVKRESDDEDFTGFSPNDEGNHHDNETKPNISATNGVDSPLGSNNNNNITSNNNNNNNNNANSDSSSDSSDDDESGGSSDASSGSSNSSSSTSSSEENTGERRKHKSRSSAAARAKGTKTTDAVAAANQVKSRFGCDLCHVSFDSQPELQKHVKMHFLNGPGSVTVTNSSSPFSTSSSSPQKSSTTKDDGSPSTKSTKSKTTID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00062179;
- 90% Identity
- -
- 80% Identity
- -