Amin003919.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amiota minor
Gene Symbol
hang
Assembly
GCA_037043295.1
Location
JBAMAW010000437.1:11943-31758[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.071 7.2 7.9 1.0 2 23 252 274 252 274 0.94
2 17 0.02 2.1 9.6 3.8 2 22 380 400 379 400 0.91
3 17 0.0052 0.53 11.5 4.8 1 23 471 494 471 494 0.91
4 17 0.0013 0.13 13.4 0.2 3 23 646 667 645 667 0.96
5 17 0.00031 0.031 15.4 0.1 1 23 675 698 675 698 0.97
6 17 0.00086 0.087 14.0 0.1 2 23 795 816 794 816 0.97
7 17 0.00044 0.044 14.9 2.4 2 23 893 915 892 915 0.95
8 17 0.062 6.3 8.1 0.8 2 23 924 946 923 946 0.95
9 17 0.0023 0.23 12.6 0.2 1 23 959 982 959 982 0.98
10 17 0.00014 0.014 16.5 1.1 1 23 1049 1071 1049 1071 0.99
11 17 0.0021 0.21 12.7 0.9 1 23 1079 1102 1079 1102 0.96
12 17 7.5e-05 0.0076 17.3 0.2 3 23 1225 1245 1224 1245 0.97
13 17 3.5e-05 0.0035 18.3 0.5 1 23 1280 1302 1280 1302 0.97
14 17 8.1e-05 0.0082 17.2 0.7 2 23 1381 1403 1380 1403 0.92
15 17 0.92 94 4.4 0.1 2 19 1423 1440 1422 1442 0.92
16 17 0.44 44 5.4 1.2 3 23 1458 1478 1458 1479 0.95
17 17 0.00077 0.078 14.1 0.7 3 23 1814 1834 1812 1834 0.98

Sequence Information

Coding Sequence
ATGTCTAGGTCCAGTTTCAGGTCCCAGGTCGATGTCGAGATATCAGCAAACGATCGTCTCTCATTGAATATTTGTCACGCTTGCATTAGTTACCTGAATTCATGGCAAAGTTTCAAGAATCGTTGTGCTTCAGCACAAACTAAACAACGCAATTGGCTGGATGCATCtaaacagcaacaattatTGGACAATAACGTTAGCATTTCGGAAGTACATAATATCAGTAGCAgcagtaataacaacaataataacaatactGGTAGCAACAATATTACCTTGGGAGCAAATGGAGAACAACAGATGCAACGagaacatcagcagcagcagcagcagcatcgcCTCCATCACCATTCTCCAGACAACGATGGATTGGAACAGACGGAAGGTTTACAACAATCGCCATCTGCTGCCACAACTACGGGGACATCATCTTCAAACATTTTGGAAGGCATAACATCGCTGAAGAAACGAAAATCATTAACAGTTTATCCACTGCCAGCCATTAAAGATGAACCCTTGGAATcagatgattatgatgagtATGGTGTGCCAAAGCATCAACATGACGAATCTGATGAAATGGTTGATCCAACATTATTTTTAGAACGTGTTGACCACGAGGACGATACACCCATCACGGATATAGGCTATGATTATAACCCACATCGTACAACTCCCGCtgtagtagcagcagcatcTCTACCACCAGCAACTGTGGCTAATGTAGCGGCAGCCGGTGATACAAAAAACGCACAATGTCGTGCCTGTAATTTACAATTCTCGACACGTGCCAATGCACGTCGTCATGAACGTAACCTACATCCGAATCTCTTTGAGCTATCAACAGAATCACCAAATAATACATTAATTACAAAGCCAACAGCAGCATTGGCTGCCGCTTTAGCACTGCAACGTGCAGGTGGCGCTGGAACAACTATATCCGATGTAACGAAATCTGTAGCCAGTGGTACAATAACATCACAAAAATATCGTCAGGAAGTTTTGAATGCATTCAATAAATGTGAAAGTGGCGGCTATGATTATAATAATCCtgaaaaatatcaacataTGCTGACCGACGAAAAGATCGTCTtgataaatcaatttaatgattttcttgAGCAATATCAGGATATGAAATGCCGTTGCTGTAATAAAACATTCTCAacttacaaaaatttcatggCTCACATTCGTAAGAAGTATCCAAATCTGCCGCGTAATTTATGCTTCAATTGTTTTAAACTAAATGATACGAAGGCACTATTTATATCCCATCTAAAGAAACGGAACTGCATTAACTTATTCCGTCTACTAAAAAGCATGCTACagaaaaatccaaattttacAACCCTTTGTACGCCGACACCAGAACGTATGCGAGCCAAGGAgttgttaattaataaaatgtacGAATGCAAATTGTGTCCCGAACATTTTCGTACAAAACATGAATTCCGTACCCACGTCTATGAACGGCATGCCGATGTTCAACGCAAAGACAATGCATCGATTCAATGCAGTTTTTGTAGTTTGGAAATTATTGATCCTGTTGATCGTAAACGTCATTACAATAATATGGATTGCATTGTGTCATTACGTTGCGTCACATGCAAAAGTAAATTTGATAATCACCAACACTTCTTGGATCACGTCTATCAAGAACATTTGGGTGGCATGAGCGATAATTCTTCGACAATAAGTGGTGCACGTCAGGCGTCCAGTTTAGAGCATTCAACTAAAGGAAAACGCAGCCGAAGCTTaagtgttgctgttgctgctggtggcggtggcggtggcgGCATTTCATCAAATGATGAGTCACATAGCAGTCTTGGTCTCGCTCTAGCATCAACGCAAGTTACTGGCAGCAGCGGTGGAACTAATCAGCCACCAGCAGCTAAATCACAATATTTTTCACGTATGCCACAAGCTTGTCCCATTTGTGGccaacaatataataattataataatgtttTACGGCATATGGAATCGAAGCATCCGGATAATTTACCAGAAACATATAAATGCGTGCGTTGCAGTACTGGTTTTCCACGTATTTCAAATTTACGTGATCATATGATAGTTGCGCATGGCGCTGATCGCAATCGTGTCTCCGGCGGGTTCGAGTATATTGTGAATGCGGACGCGTTAAAGTTGATTGACGGTGGCCCGCCAAATGCTTATACCGGTCGTTACGATTACGTCATGAAAGATTTGATGTCAATTAATGGTGGGACACTCGatgatgacgacgatgatgtgGACAGTCAGTCGGCCAAACGTATGCGTTTGGACACATCAATTGGTGGCGGCACAGGATCCGGCAGTAACCAGAATGCTGCCTCGTCATCATCCAATAACCTATTATCGAGTCAAAAAGAATGTCCAGTTTGTGCAGCtgtttttaataacaatattgGTCTATCGAATCATATGCGTTCTCATACAGCGGCGGCGGCAAATGCAGCTGCAATGGCGGTTGCGAATCgcataacaaataaatcacTGACTGTGACTGCAACCTCCTCTTCTTTACCAACAACTCCAAAAACACCGGTATCAGTAGCTTCATCATCGCATGAAACAATCAATACAACACCACCGACTGCAGAGCAGCAAGCGCTTTATCGACGTGGTTTCGAACAGGCAGCTGATCGTCGGTTCCGTCGTATGCGTTGCCAAATCTGTCAGCGGCGTTTTTCATCAAAGAAATCATATCGTTATCATATGTTAAATGAGCATCAAATCCGTAATGTTCAGTTTATCAAATGCAAATTATGTAGTGCCGATTTTGCTCATGAAAAGGGCCTTAAAGTGCATCTTTTTAAGGTGCACAACACTTTGATTAAGGATGAAATGATTGTAAAGCAATTTGAATGCGATATTTGCTCAGTAGTTTATACATCGGAAATGGATTTATTGCAGCACAAAAAGACTATACACGGTGCTGAAGATGCACAACTCGATGAAATCGATATGGATGAGTCAACGGCCACTGTATCAAATCTAGATACATCGTCGTTTAACATGGATAATAAGCAACATAAATCACGCATGTCAACACCGATTGCTGGCAcccaacatcatcagcaggGAAATGCAACGATTGGTGGTGATGGTCTTACTGGGCCACTGTATTGGTATCAATGCAAATACTGCCCATCGAACTTCAATACCAATAAGAAATTAGCAATCCATATTAATTCTCATGATGAATTCGATTCGAAGGATTATTCATGCAAGGATTGCGGCAATGTTTATAGTGGTCGTAAAAGTCTTTGGGTACATCGCTATAAGAAACATCCTCAGATAGCTGATCCCTCGGAATGTGTGCTTTGCTGTAAAATCTTCTTCGATCAGCAAATGTTGGAGAATCACACACCAACTTGTAATCGCAAACCGATTACTGCTACAGGCGCTCAAGCGGAAAGTGTTGTTGCTaatttgtcatcatcatcatcatcaagaggCTATTTTAAGCATAAAACTGgcgatgatgaagatgatgaagaacaTAACAGTGATAGTAATGGTGGTGGTGCAGGCGGAGGCGGTGGAACTGTTGTTGGCACTTTGGGTGGCGGTGAAGTGGAAGTGTCAACAATGCCTACAATGTCTACTGCTGCATCGACAACAAAGTCACGTAATTTCAAAATACCCGAAGTGGCATGCACAATTTGTGGTGCACGATTCACAGATCAAGATTTATTTACCAAACACATTGTAAAGCATGAACAAGAATTATATACAGATAATCCACTCGCGGCCATGTTCGATGATGGACCTTCCGATCCAAACCAATTTTATTTGGATCGTGTCAATGATAACGGCGAGTACGCTTGCGATCTATGCGACAAAACATTTACCCAGATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAACAAACAGAACCAGGCCGACGCCGATCTGGCAGCATCTGCTatgaccaacaacaacaacagcagcagcaccagcaacaaTCAACACAACAATTCACCATCGTCAATGAAGAATATCCAACCACATCTACAGGAATTACATGCAGTCGGTCTCATGCCAAACCATCAGCATCAAATGAAACGAGACCACCACATCAGAACCCTGAAACGCAAACGGGAACTGAAATGCGAATATTGCCCCTCGACCTTTATCAGCAACAATAATCTTCGTCGTCATATGTTTGAGTTGCACAAGAACGAGGTGGACGATGTGTTTGAGCCACCtaaaattgatattgatgaCCCATTGTCGTGTCGTCGCTGTGATTTAAAGTTTGAAACTAGAGATGAATGGATCGAACATAAGGTTGGCGAAGCCCGTGTAATGCGTCCATATGGGCCATTCCAATGGGGTTGTGACTTATGTGGAGACTATGTCTCACGCAaagagaaattaataaatcatctaaataatcatcataagGAGGGTATCGTTTTGCCCATTGGTAGTGGCATTAGTTCTAAAAagaatgatgacgatgaagaagatgatgaagaggaAATTAAACAATCATCCATGGAGATTGCAAAGAGCGGTGAAGATTCAAACGGTCCTCAAACTTATGATAATAACGCAATGACGCCAGGTGATATagaagacgatgatgatgatgacgttggTGATTTCATGgaagacgatgatgacgataatgaagaagatgatgcTGATGGCGAAAGTGTTCCTAAAAGAATGGGGGATGACAATGGCGTCCTccacgatgatgatgacgatgatgatgacgtcgAAGACGATGGTGACGACGATATGGATGATTTCATTAATACAGAGACTGATAATAATGTTCCAGTCAATGTTCATGACAACGATGAAGACACCACCGATGAAGATGATGGTGAAGGTGgcgatgatgaagaagaagatgacgatggtgatggtaATGAAGGTGAAGGCGAAGGTCGAGAAAATGTCAACATTGACCGGCAACAGCAGTTAAAGAATGAAACGTTGAAAGTAGCTCCTTTGATAATTGGCACTGATATGAAGGTCAAGAGGGCAAGTGATAATGCTATGATGGTCAAGACGGAAAGTGATGATGAGGATTTTACCGGTTTCTCACCAGATGACAACCATTATAACACTAAGGcgaacacaacaacaactaatggCGTTATGTCACCATtaggcagcagcagcaacaacaagaacaacgacaattatagcaaaaatatcaacaacaatgcGAATAGTGACAGCTCAAGTGATAGCAGTGATGATGACGAATCTGGTGGCAGTAGTGATGCATCTTCAGGTTCTTCCaattcaacaacatcatcatcatcatcagaaaaCACGGGTGAGAGGCGTAAGCATAAATCAagatcatcagcagcagcaagagCCAAAGGAGAGAAAACAACAGATGCGATTGCTGCTGCTAATCAGGTTAAGTCACGTTTTGGTTGTGATCTATGTCATGTTTCTTTCGATTCACAGCCGGAACTTCAGAAGCATGTTAAGATGCATTTTCTTAATGGGCCTGGCTCTGTTACTGTAACAAATTCGTTCTCGCCCTATTCCATATCCTCCTCACCACAAAAGAACAGCACAACAACAGATGATGGACCCACTAAGAAATCCTCAAAAAATCGTTGA
Protein Sequence
MSRSSFRSQVDVEISANDRLSLNICHACISYLNSWQSFKNRCASAQTKQRNWLDASKQQQLLDNNVSISEVHNISSSSNNNNNNNTGSNNITLGANGEQQMQREHQQQQQQHRLHHHSPDNDGLEQTEGLQQSPSAATTTGTSSSNILEGITSLKKRKSLTVYPLPAIKDEPLESDDYDEYGVPKHQHDESDEMVDPTLFLERVDHEDDTPITDIGYDYNPHRTTPAVVAAASLPPATVANVAAAGDTKNAQCRACNLQFSTRANARRHERNLHPNLFELSTESPNNTLITKPTAALAAALALQRAGGAGTTISDVTKSVASGTITSQKYRQEVLNAFNKCESGGYDYNNPEKYQHMLTDEKIVLINQFNDFLEQYQDMKCRCCNKTFSTYKNFMAHIRKKYPNLPRNLCFNCFKLNDTKALFISHLKKRNCINLFRLLKSMLQKNPNFTTLCTPTPERMRAKELLINKMYECKLCPEHFRTKHEFRTHVYERHADVQRKDNASIQCSFCSLEIIDPVDRKRHYNNMDCIVSLRCVTCKSKFDNHQHFLDHVYQEHLGGMSDNSSTISGARQASSLEHSTKGKRSRSLSVAVAAGGGGGGGISSNDESHSSLGLALASTQVTGSSGGTNQPPAAKSQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDNLPETYKCVRCSTGFPRISNLRDHMIVAHGADRNRVSGGFEYIVNADALKLIDGGPPNAYTGRYDYVMKDLMSINGGTLDDDDDDVDSQSAKRMRLDTSIGGGTGSGSNQNAASSSSNNLLSSQKECPVCAAVFNNNIGLSNHMRSHTAAAANAAAMAVANRITNKSLTVTATSSSLPTTPKTPVSVASSSHETINTTPPTAEQQALYRRGFEQAADRRFRRMRCQICQRRFSSKKSYRYHMLNEHQIRNVQFIKCKLCSADFAHEKGLKVHLFKVHNTLIKDEMIVKQFECDICSVVYTSEMDLLQHKKTIHGAEDAQLDEIDMDESTATVSNLDTSSFNMDNKQHKSRMSTPIAGTQHHQQGNATIGGDGLTGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQIADPSECVLCCKIFFDQQMLENHTPTCNRKPITATGAQAESVVANLSSSSSSRGYFKHKTGDDEDDEEHNSDSNGGGAGGGGGTVVGTLGGGEVEVSTMPTMSTAASTTKSRNFKIPEVACTICGARFTDQDLFTKHIVKHEQELYTDNPLAAMFDDGPSDPNQFYLDRVNDNGEYACDLCDKTFTQMTALKVHRKWHFRGDNKQNQADADLAASAMTNNNNSSSTSNNQHNNSPSSMKNIQPHLQELHAVGLMPNHQHQMKRDHHIRTLKRKRELKCEYCPSTFISNNNLRRHMFELHKNEVDDVFEPPKIDIDDPLSCRRCDLKFETRDEWIEHKVGEARVMRPYGPFQWGCDLCGDYVSRKEKLINHLNNHHKEGIVLPIGSGISSKKNDDDEEDDEEEIKQSSMEIAKSGEDSNGPQTYDNNAMTPGDIEDDDDDDVGDFMEDDDDDNEEDDADGESVPKRMGDDNGVLHDDDDDDDDVEDDGDDDMDDFINTETDNNVPVNVHDNDEDTTDEDDGEGGDDEEEDDDGDGNEGEGEGRENVNIDRQQQLKNETLKVAPLIIGTDMKVKRASDNAMMVKTESDDEDFTGFSPDDNHYNTKANTTTTNGVMSPLGSSSNNKNNDNYSKNINNNANSDSSSDSSDDDESGGSSDASSGSSNSTTSSSSSENTGERRKHKSRSSAAARAKGEKTTDAIAAANQVKSRFGCDLCHVSFDSQPELQKHVKMHFLNGPGSVTVTNSFSPYSISSSPQKNSTTTDDGPTKKSSKNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00062179;
90% Identity
-
80% Identity
-