Basic Information

Insect: Amiota mariae
Gene Symbol: Hr39_1
Assembly: GCA_035041805.1
Location: JAWNKV010000363.1:6099322-6105927[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.35 4.2e+03 -2.2 0.3 84 113 226 255 134 317 0.44

2 4 3 3.6e+04 -7.4 8.5 53 160 346 451 320 489 0.44

3 4 3.6e-18 4.2e-14 53.7 3.2 1 134 570 720 570 731 0.68

4 4 1.9e-81 2.2e-77 262.2 0.1 196 408 755 955 737 955 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.35	4.2e+03	-2.2	0.3	84	113	226	255	134	317	0.44
2	4	3	3.6e+04	-7.4	8.5	53	160	346	451	320	489	0.44
3	4	3.6e-18	4.2e-14	53.7	3.2	1	134	570	720	570	731	0.68
4	4	1.9e-81	2.2e-77	262.2	0.1	196	408	755	955	737	955	0.94

Sequence Information

Coding Sequence: atgtCCAccataaaaactgaaaacgtgaccacaacaacaacatcagccaCAACTGTGACATCAaccggtggtggtggtggtggtggtggtgttggtggtggctTTCAATTACCAGTAAATATGAGCAACCATACAAGTATCTTAGGGTCCAATACGACGGCGGGATCACCATTGACGACAACATCTACGACGACAACAACTCGTAATAATGTATCTGTAACAAATATCAAGTGCGAAGTAGATGAACTGGTGACCGCGTCGAATGGTAATATAGTGCCAGTAATAACGAGTACGGGTAACTATAATGGTGGACAATCCACATTGATGGCAGCATCAGGTGGCATACGCATACCACTGACAAATGCCACCGCTAccgcaacaccaacaacattgCCAACAACTAAAGCCGAAGATTCTGATTCCGAGGCAGAACTGACAAACATTGAGAATTTCAAAGTAACACGGCGTGCCACAAGTTGTGCAAATAATGCTGCTTCagtagcagcatcagcagcagatGCCCATAATAAGAATGGACCACGTCCAATGTCATGGGAAGGTGAACTGTCCGAAACGGAAACAAATGAAACTGAACTCATGGAGACGGAGAATTCTTTAAGTAATGGTTTAGGGGGCATCGTTGGAGTGGCGGTGATCAAAAGTGAAGCTACTACTACGACCACCTCAAGTGGCGGCAGCAGTCAACATATGCAGCCTATTAAAACAGAGCTAGAGCACATCTCTGCTGGTATGTTTACAACGACAACGGCGATAGCAACGCCTACACATGCGGCCAAATTAAAATTGGCTCCAACACAAAGTGATCCCATCAATCTCAAATATGAGCCCAGTTTGATAAGTGACATTATAGCTTCGTCTGCAGCGggttcaacaacaacaacagtagtgTCCGGCGGTGGTGGTCTTAATTCACCGTTGCTGACGGGGCGCGGTAAATGCAATCAGTTGCCGTTGCCCGCAAATCCTAGTCCCGATTCCGCCATACATTCCGTTTATACACATAGTTCGCCATCACAATCTCCACTGACGTCACGCCATGCACCCTACACACCTTCACTGAGTCGCAATAATAGCGATGCATCGCATAGTTCATGCTACTCTTATAGCTCTGAGTTTAGTCCAACACATTCGCCTATACAGGGACGTCATGCTCCGCCAGCCGGTGCACATTATCCGGGAAGTTTTAATGGCGGTGGCGGCAATGCCACAGGTGGATCTCTACATCATAGTGTGCTTTATAGACCACTTAATATTGACTCAACGGTTACTGGTCCCACAGCAGCAACGGCAAGTTGTATCAACCAAGAGGCGCAAAATCTTAGCATGgatacaacaacaagcagCAGTTCGAATGTAacgcagcaacaacagccaaCATCATCTAGTGGCTTTGATtcaggtggtggtggtggcggtacATCTAGCAGCTTGCCTGCTTCACCAGCGGGTATTTCACGGCAGCAACTCATTAACTCACCATGTCCAATTTGTGGCGATAAAATCTCTGGCTTCCATTATGGTATCTTCTCATGTGAATCGTGTAAGGGCTTCTTCAAACGCACCGTTCAAAATCGGAAGAACTATGTTTGTGTGCGTGGCGGTCCTTGCCAGGTGAGCACCTCGACGCGGAAGAAGTGTCCTGCATGTCGTTTTGAGAAGTGTCTTCAAAAAGGTATGAAACTGGAAGCCATACGGGAGGATCGTACTCGTGGTGGACGTTCGACTTATCAATGCACCTATACATTACCAAATTCAATGCTAAGTCCATTGTTGAGTCCAGAACAACAGCAAGGTGTTGCAGTAGCTGCGGCGGCAGTGGCTGccaatcagcaacaacaacatcagcagcagcagcaacaacaccaccaccagcaacaACGTTTACATGCCCTTAATGGTTATGGTCAATCGCCAGTATCGGGACATGGAAACAGCCTTACAACGCAGACAATCAAAACCGAACAACAGGATCTAGGAGCGTATAATGGTGGCACTGGAACAGCTTCACCAGCAGCAACGCCAAATAACATCGGTGTTCCAGCCCTGCTGCAGGAGATTATGGATGTCGAACACCTTTGGCAATATAATGATGCCGAATTGGCGCGTCTGAATCAACCACAAACATCAACAAGTGCAAGTTCCTCCGGTGGAGCACATAATTCatctggtggtggtggaggtggtggaAATGCCAATACACCAATGACCAACCCACTGCTGGCCAGTGCCGGTCTTGGTTCAAATGGTGAAAATGCAAATCCCGATTTAATAGCTCACCTCTGCAATGTTGCCGATCATCGTCTTTATAAGATTGTCAAATGGTGCAAAAGTTTGCCACTATTCAAGCATATTTCGATCGATGATCAAATCTGCCTGCTCATTAATTCATGGTGTGAATTGCTGCTCTTCTCCTGCTGTTTTCGTTCGATCGATACGCCCGGTGAGATAAAAATGTCACAAGGCAAGAAAATCACATTGGCTCAGGCCAAGTCGCATGGTCTACAGACATGCATTGAACGTATGCTGAATCTGACAGATCATTTGCGTCGCCTGCGAGTCGATCGCTATGAATATGTTGCTATGAAAGTTATAGTACTCCTTCAATCGGacaCCACTGAACTGCAGGAGCCTGTAAAAGTTCGCGAATGCCAAGAGAAAGCTCTACAGAGTCTGCAAGCCTATACCCATGTCCATTATCCCGATACGCCGTCCAAATTTGGTGAACTATTGTTACGTATTCCCGATCTTCAGCGTACTTGtcaaCTGGGCAAAGAGATGTTAACCATAAAATCACGGGATGGTGGTGATTTCAACTTGCTGATGGAACTTCTCCGTGGAGAACATTGA
Protein Sequence: MSTIKTENVTTTTTSATTVTSTGGGGGGGGVGGGFQLPVNMSNHTSILGSNTTAGSPLTTTSTTTTTRNNVSVTNIKCEVDELVTASNGNIVPVITSTGNYNGGQSTLMAASGGIRIPLTNATATATPTTLPTTKAEDSDSEAELTNIENFKVTRRATSCANNAASVAASAADAHNKNGPRPMSWEGELSETETNETELMETENSLSNGLGGIVGVAVIKSEATTTTTSSGGSSQHMQPIKTELEHISAGMFTTTTAIATPTHAAKLKLAPTQSDPINLKYEPSLISDIIASSAAGSTTTTVVSGGGGLNSPLLTGRGKCNQLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHAPPAGAHYPGSFNGGGGNATGGSLHHSVLYRPLNIDSTVTGPTAATASCINQEAQNLSMDTTTSSSSNVTQQQQPTSSSGFDSGGGGGGTSSSLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSTSTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCTYTLPNSMLSPLLSPEQQQGVAVAAAAVAANQQQQHQQQQQQHHHQQQRLHALNGYGQSPVSGHGNSLTTQTIKTEQQDLGAYNGGTGTASPAATPNNIGVPALLQEIMDVEHLWQYNDAELARLNQPQTSTSASSSGGAHNSSGGGGGGGNANTPMTNPLLASAGLGSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGKKITLAQAKSHGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEPVKVRECQEKALQSLQAYTHVHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00062824;
90% Identity: iTF_00061183;
80% Identity: iTF_00062001;