Amar018195.1
Basic Information
- Insect
- Amiota mariae
- Gene Symbol
- sip1
- Assembly
- GCA_035041805.1
- Location
- JAWNKV010000370.1:5497063-5499825[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-93 6.9e-89 299.1 12.5 2 275 448 721 447 721 0.97 2 2 0.087 1.6e+03 -0.6 0.0 156 192 732 767 725 776 0.70
Sequence Information
- Coding Sequence
- ATGTCTGATGACGAATATGAACGTTTTGAAATCACAGACTATGATTTGGCAAATGAGTTTAATATAAATCGACCGCGCGGTTCGCGTCAtacaaaacatcaacaaatttatgGCATTTGGGCTGATAGTGAGAATGATAGTGAAGCTGAAGATGAAACTGGTGGGCGTCGTGGTAAAAGACGCGGTCTCGGTGCCGGCGCTAATAAGCAAAAAGACTACACGGCGCCTGTAAGTTTTGTTGCTGGTGGCATACAACAATCTGGCAAGAAAAAGAAGGATAAAGAGAAACATAAAGAAGGCGGCAATGGAGACACAGACTAttctggtgatgatgatgatggcgaggCACGGCCAGCATTTGGACGTAATCAGCCACATCTTATGGATATGGATTCGCAAAGTAGTAATACAGACTCAGATGAAAGTGTTGAAAtggataagaaagaaaaacaaaaagtcgCTTCTACTAATTCACGTGGTAGTAGCTTATTTCAACATCGTTCACACATTGCAGGCAATAGAAATGTGGGCGCATGGGAGCAACATACGCGTGGTATTGGAGCAAAACTGCTTCTTCAAATGGGTTACGAGCCTGGTAAAGGTTTGGGCAAGGATTTGCAAGGTATTTCACAACCAGTTCAGGCTCATGTACGCAAAGGGCGTGGTGCTATTGGTGCCTATGGACCAGAAGTGGCTGCATCAATTGGCAGTTCAAAGCAAGGAAATCTAAAGTTGGAGGACGAAGTGCGCGATACAAAAGAAACTaaagaacaaatgaacaaGTGGCGAAAGACTTCAGATGGTCGtgaaggtggtggtggtggtggcggcatTAAAATAggcaaaaaatattactacAGAACTGTAGAAGAAGTGATTGCAAAGGGCAAAAAGTCACACTATCAGCTTGgtgagaaaataagtaaaaagcTGGGTAATGTGCCTGTCATTGATATGACTGGTCCAGAGCGCCGCGTCCTAAGTGGTTATCATGCACTTGCACAGTCAAGAATAGCCGACGATGAAGTATTGTATGATCTATCCGAAGCTACAACACCCACAGGTGCAGCGACAGCTGCTgctaaaaaattaacaaaattagaaGCATTTGCCATGCCGGAGCTAACGCACAATCTCCAGCTGATTGTAAATATGTGTGAGCAAGAAATCATTTCGTTAGATAAACAAGAGCGAGAAGCATCGGACAAACAAGCGTCTTTGGAGCATGAGTTCAGAAATCTAAAAGAAATTGTACAGTTGGAATCCGCACATTTGAGTACACTGGAAAAAGCTATAGATCTGGTGGAGGAACTATGCagtgaaaattcaaatttaacacTTTCACGGGCAGAGCATTTATTCAGTAAGTTAAAAAGTGATTATGCTGCTGAATATTTGGAATTTGGTTTGGGTGATCTTGCTGCAGGTGTAATAGCACCCTTAGTAAAGGAGGCCCTTATTGGTTGGCAACCACTTGCACAGCCAACACAGCATATTGAACTTATTAAAAAGTGGCGTGGATTGTTGGATACTCAGGACAATAAATTAGTAGCTGAAGTAAAAGACGACAAACGCAATGTTTTTGATCCATATTCATCACTTGTTTGGGTTGGTGTCATACCGAGTTTTCGTGCATGTTCCgaaaactggaatcctaagcAGCATCAACAAATGGCAGCGCTGCTTGATGCTTGGGCACCACTTTTCCCCACATGGATATTAGATTCTGTGTTGGAGCAATTAATTTTGCCACGTTTGACTAATGGAGTGCGTCTTTGGGATCCTCTAACCGATACAGTGCCAATACACATTTGGATACTTCCCTGGAATACCATTCTCGGGGAAAAAATGGAGGACAACATCTACCCGATTATACGTGAAAAATTAGGCTCTGCATTACAGGCTTGGATGCCACAAGATCGTTCAGCTCGTGCCATGCTCACACCTTGGAAAGGTGCATTTAGCGATACTGAGATGCAGTTCTTCCTCATGAGACACATCATACCAAAGTTGCAACTAATCCTAGCAGACTTCATTATAAATCCATTGCAACAAGAATTAGAACCTTGGAATCAAGTGTGGGAATGGCACGAACTAATACCTCCCATGCTAATGGCACAATTACTTGATAAGTACTTTTTCCCGCGCTGGATGCAAGTCCTCATTTTGTGGATCAATCAATCACCAGACTATACAGAGATTTCACGTTGGTACACCGGCTGGAAGAGTATGTTAAACGAAGAGCTCTTACGAGAACCGAATATAAAAGAGCATTTGAGACGTGCCCTTGAAATTATGCATCGTGCAACAGATTCTGTGCCATCACCTATTGTAACTGCAGCACCGCCACCCCCACAACCGCCACAGCCATTGATTATGGACCTTTCACAATTGGCAGCTGCCACTGCACCACCGCAACTCGAATTCAAAGAATTGGTCTCACAAAAATGTGCTGAAATTGGTATATTGTTTGCGCCGTTGCCAGGAAGAAGGGAATTAGGCAAGCAGATCTATCGTGTTGGAAAACTATATTGTTACATCGATCGGAATGTGTGCATGCTAAGCGATAGCAGCTTCAAAAATTGGTTACCCACATCAGTAGCTCAACTCTTGGAACGTTCACAAACGGGCATTTTAAATTGA
- Protein Sequence
- MSDDEYERFEITDYDLANEFNINRPRGSRHTKHQQIYGIWADSENDSEAEDETGGRRGKRRGLGAGANKQKDYTAPVSFVAGGIQQSGKKKKDKEKHKEGGNGDTDYSGDDDDGEARPAFGRNQPHLMDMDSQSSNTDSDESVEMDKKEKQKVASTNSRGSSLFQHRSHIAGNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEVAASIGSSKQGNLKLEDEVRDTKETKEQMNKWRKTSDGREGGGGGGGIKIGKKYYYRTVEEVIAKGKKSHYQLGEKISKKLGNVPVIDMTGPERRVLSGYHALAQSRIADDEVLYDLSEATTPTGAATAAAKKLTKLEAFAMPELTHNLQLIVNMCEQEIISLDKQEREASDKQASLEHEFRNLKEIVQLESAHLSTLEKAIDLVEELCSENSNLTLSRAEHLFSKLKSDYAAEYLEFGLGDLAAGVIAPLVKEALIGWQPLAQPTQHIELIKKWRGLLDTQDNKLVAEVKDDKRNVFDPYSSLVWVGVIPSFRACSENWNPKQHQQMAALLDAWAPLFPTWILDSVLEQLILPRLTNGVRLWDPLTDTVPIHIWILPWNTILGEKMEDNIYPIIREKLGSALQAWMPQDRSARAMLTPWKGAFSDTEMQFFLMRHIIPKLQLILADFIINPLQQELEPWNQVWEWHELIPPMLMAQLLDKYFFPRWMQVLILWINQSPDYTEISRWYTGWKSMLNEELLREPNIKEHLRRALEIMHRATDSVPSPIVTAAPPPPQPPQPLIMDLSQLAAATAPPQLEFKELVSQKCAEIGILFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDSSFKNWLPTSVAQLLERSQTGILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00061118;
- 90% Identity
- iTF_00061118;
- 80% Identity
- -