Acom026271.1
Basic Information
- Insect
- Amiota communis
- Gene Symbol
- sip1
- Assembly
- GCA_037043315.1
- Location
- JBAMAV010001536.1:1983184-1985930[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-91 2.8e-87 293.7 12.6 2 275 443 716 442 716 0.97 2 2 0.28 3.1e+03 -1.7 0.0 156 189 727 759 720 768 0.65
Sequence Information
- Coding Sequence
- ATGTGTGACGAGGAATATGAACGTTTTGAAATCACAGACTATGATTTggcaaatgaatttaatataaatcGACCGCGCGGTTCGCGACATacaaaacatcaacaaatttatgGCATTTGGGCGGACAGTGACAATGACAGTGGTGATGATGAGGCCGGTGGTCGTCGTGGTAAAAGACGCGGTCTCGGTGCCGGCGCCAATAAGCCAAAAGACTACACGGCTCCGGTAAATTTTGTAGCTGGTGGCATACAACAATCTGGCAAGAAAAAGAAGGATAAAGAGAAACCTAAAGAAGACAATGGAGACACAGActattctgatgatgatgatgagggaAATTCACGCCCCTCATTCGGAAGTAAGCAGCCGCATCTTATGTATATGGATTCGCAAAGTAGTAATTCCGACTCTGATGAAAGTGTTGAAGTGGATAAACATGGAAAACGAAATGTCGCAAGTACAAATTCACGTGGCAGTAGCATCTTTCAACATCGTTCGCACATTGCAAGCAATAGGAATGTGGGCGCTTGGGAACAACATACGCGTGGTATTGGAGCAAAACTGCTTCTTCAAATGGGTTACGAGCCTGGCAAAGGTTTGGGTAAAGATTTGCAAGGTATTTCACAACCAGTGCAGGCTCATGTGCGTAAAGGTCGTGGTGCTATTGGTGCCTATGGACCAGAGGTCGCTGCATCAATTGACAACTCAAAGCAGGCCATTCAAAAGTTAGAGGACGAAGTGCgcgaaacaaaagaaactaaagAGCAAATGAACAAGTGGCGAAAGAATTCAGATGGTCGTGAAGGTGGTGGTGGCATTAAGGTGggcaaaaaatattactacAGGACTGTAGAGGAAGTGATTGccaaaggaaagaaaacaaattatcaGTTGGGTGagaaaataagcaaaaagCTGGGCAATGTGCCGGTTATTGATATGACAGGTCCAGAGCGACGCGTCTTGAGTGGTTATCATGCACTTGCACAGACAAGAATTGCCGACGATGAAGAATTGTATGATGTATCCGAAGCTACAACACCCACTggagcagcggcagcagctgCTAATAAAATAGCAAAAGCAGAAGTATTTGATATGCCGGAGCTAACGCACAATCTCCAGTTGATAGTAAACATGTGTGAGCAAGATATCATATCGTTAGATAAACAAGAGCGAGAAGCGTCGGACAGACAAGCGTCACTGGAGCATGAGTTCAGAAACCTTAAAGAAATTGTGCAATTGGAATGCGCACATTTGAGCACACTTGACAAGGCCATAGATCTGGTGGAGGAACTATGCAGTGAAAACACAAATTTGACACTTGCACGCGCAGAGCATTTATTCAGTAAGTTAAAGAGCGATTATGCTGCTGAATATTTGGAATTTGGTTTGGGTGATCTTGCTGCAGGTGTGATAGCACCACTAGTAAAAGAGACACTTGTTGCTTGGCAACCACTTGCACAGCCAACACAGCACATAGAACTCATTAAAAAATGGCGTGGTTTATTGGATACTCCAGACAACAATTTAGTAGCTGAAGTAAAAGATGACAAGCGCAATGTATTCGACCCGTATTCATCACTTGTTTGGGTTGGTGTCATACCGAGTTTTCGTGCATGTTCAGAAAATTGGAATCCCAAGCAGCATCAACAAATGGCTGCCCTGCTTGATGCTTGGGCACCACTTTTCCCCACATGGATACTAGATTCAGTGTTGGAGCAATTAATTTTGCCTCGTTTGACAAACGGAGTTCGTCTTTGGGATCCTTTAACCGATACAGTGCCAATACACATTTGGATACTTCCATGGAATATCATTCTCGGGGAGAAAATGGAGGAAAACATCTATCCGATTATACGCGAAAAGTTAGGTGCTGCACTACAGGCTTGGATGCCACAAGATCGTTCAGCACGTGCCATGCTTACACCTTGGAAAGGAGCATTTAGCGATGTTGAGATGCAGTTCTTCCTCATGAGATACATTATACCAAAGCTACAACTCGTACTAGCAGACTTCATTATAAATCCATTGCAACAGGATTTAGAACCTTGGAATCAAGTGTGGGAATGGCATGAACTGATACCGCCCATGCTAATGGCACAATTACTTGACAAATACTTTTTCCCACGCTGGATGCAAGTGCTCATACTATGGATCAATCAATCACCAGACTATACAGAGATTTCACGTTGGTACACCGGCTGGAAGAGTATGCTAAACGAAGATCTCTTACGAGAACCGAATATAAAAGAACATTTAAGGCGTGCCCTTGAAATTATGCACCGTGCAACGGATGCTGTGCCATCACCAATTGTAACCACagcaccgccaccaccacagCCGCCACAACCATTGCTTATAGACCTAACACAATTGGCAGCGGCTACTGCACCTCCTCAACTCGAATTCAAAGAATTGGTCTCACAAAAATGTGCTGAAATTGGCATATTGTTTGCACCCTTGCCAGGCAGGAGGGAATCAGGCAAACAGATCTATCGTGTTGGGAAACTATATTGCTATATCGATCGGAATGTGTGCATGCTAAGCGATGGCAGTTTTAAAAATTGGCTACCCACTTCAGTAGGTCAACTCTTGGAACGTGCACAAACTGGTATTTTaaattga
- Protein Sequence
- MCDEEYERFEITDYDLANEFNINRPRGSRHTKHQQIYGIWADSDNDSGDDEAGGRRGKRRGLGAGANKPKDYTAPVNFVAGGIQQSGKKKKDKEKPKEDNGDTDYSDDDDEGNSRPSFGSKQPHLMYMDSQSSNSDSDESVEVDKHGKRNVASTNSRGSSIFQHRSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEVAASIDNSKQAIQKLEDEVRETKETKEQMNKWRKNSDGREGGGGIKVGKKYYYRTVEEVIAKGKKTNYQLGEKISKKLGNVPVIDMTGPERRVLSGYHALAQTRIADDEELYDVSEATTPTGAAAAAANKIAKAEVFDMPELTHNLQLIVNMCEQDIISLDKQEREASDRQASLEHEFRNLKEIVQLECAHLSTLDKAIDLVEELCSENTNLTLARAEHLFSKLKSDYAAEYLEFGLGDLAAGVIAPLVKETLVAWQPLAQPTQHIELIKKWRGLLDTPDNNLVAEVKDDKRNVFDPYSSLVWVGVIPSFRACSENWNPKQHQQMAALLDAWAPLFPTWILDSVLEQLILPRLTNGVRLWDPLTDTVPIHIWILPWNIILGEKMEENIYPIIREKLGAALQAWMPQDRSARAMLTPWKGAFSDVEMQFFLMRYIIPKLQLVLADFIINPLQQDLEPWNQVWEWHELIPPMLMAQLLDKYFFPRWMQVLILWINQSPDYTEISRWYTGWKSMLNEDLLREPNIKEHLRRALEIMHRATDAVPSPIVTTAPPPPQPPQPLLIDLTQLAAATAPPQLEFKELVSQKCAEIGILFAPLPGRRESGKQIYRVGKLYCYIDRNVCMLSDGSFKNWLPTSVGQLLERAQTGILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00061937; iTF_00062779;
- 90% Identity
- iTF_00061937; iTF_00062779;
- 80% Identity
- -