Basic Information

Insect: Amblyteles armatorius
Gene Symbol: -
Assembly: GCA_933228735.2
Location: OW121691.1:11537635-11540081[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0058 0.4 11.2 0.4 2 23 126 147 125 147 0.95

2 11 0.003 0.21 12.1 4.2 2 23 211 233 210 233 0.88

3 11 0.0048 0.33 11.5 1.9 1 23 383 405 383 405 0.96

4 11 0.00013 0.0088 16.5 1.6 1 23 411 433 411 433 0.94

5 11 2.6e-06 0.00018 21.8 0.6 1 23 439 461 439 461 0.98

6 11 1.6e-05 0.0011 19.3 1.2 1 23 476 498 476 498 0.98

7 11 2.1e-08 1.5e-06 28.3 3.6 1 23 504 526 504 526 0.99

8 11 2.5e-06 0.00017 21.8 0.4 1 23 533 555 533 555 0.99

9 11 3.8e-06 0.00026 21.3 1.6 1 23 561 583 561 583 0.98

10 11 0.00024 0.017 15.6 4.2 1 23 589 611 589 611 0.98

11 11 7.5e-06 0.00051 20.3 1.8 1 23 617 639 617 639 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0058	0.4	11.2	0.4	2	23	126	147	125	147	0.95
2	11	0.003	0.21	12.1	4.2	2	23	211	233	210	233	0.88
3	11	0.0048	0.33	11.5	1.9	1	23	383	405	383	405	0.96
4	11	0.00013	0.0088	16.5	1.6	1	23	411	433	411	433	0.94
5	11	2.6e-06	0.00018	21.8	0.6	1	23	439	461	439	461	0.98
6	11	1.6e-05	0.0011	19.3	1.2	1	23	476	498	476	498	0.98
7	11	2.1e-08	1.5e-06	28.3	3.6	1	23	504	526	504	526	0.99
8	11	2.5e-06	0.00017	21.8	0.4	1	23	533	555	533	555	0.99
9	11	3.8e-06	0.00026	21.3	1.6	1	23	561	583	561	583	0.98
10	11	0.00024	0.017	15.6	4.2	1	23	589	611	589	611	0.98
11	11	7.5e-06	0.00051	20.3	1.8	1	23	617	639	617	639	0.99

Sequence Information

Coding Sequence: ATGTTCATCGTGACGAAGGAAATAGACAGCGAAAATATAAGCAAACTATGCCGGACCTGCTTGCGGGAGGACGGCGACAAGATGGTCTGCCTGTTCGTCGGTCCCGCTGGTTCTTCGCTCGCTGCGAAGCTGCGAACGCTTTCGTGTCTCGAGGTGTGGCAGGGAGACGGTCTTCCGGAAAAGCTATGCGATCGTTGCGTTACCAGAGCAGAGTCCGCACTGTTGTACAGAGAGCAATGCCGGGCAGCTGATCTGGCGCTGAGAGAAGCAGCATCCCAGGTTTCCAGAGCAGCTCTCGACGCAGCGGTTCCCAGCTCCAAGCTCTACCACCAGCAGAAAGTCTTCACGCCGGTTCAGACTTCTCACAAGTCTCAAAAATGTTCGGAGTGCGGTGCAATTTTTGGCACCTACCAGGAGCTCTGCGCTCACAGCCAGGCCCACTTGCCCTTCGTCAGAGAGGCGAGGCCAGTTCAGCACATGAACATCGTGGAGTCTCAGGGTGTTTCGGGATATATGAGCGCCGATTCCCGACTGGAGAAGACCTCTGGGCTCTTGCCGGGCGCGTTCGCGCCGCAAGGAATCATAGAGACCGTCTCGCCGGCGAAAAACGGTCGAGCCGCCTGCGCTCTTCACTGCTCGATCTGCAATCACACTTTCACCAACAGAGTACAATTGATAAACCATCACGGCTTGAACCACTGCCGCGAGGACGTCGAGACCTCCTGCGACGACGACAATCTCGCGATCGTCGCCGATCCCAAGATCACCGACATTCGCACCGGAAGTTTCGAGCGGAGTATCGGTCAGTCCGTCCACAGCGGTATACAAAATTTGTCCTACAGCCGCAACAACGAGGTGCCCATCGAGGCGATAAATTACTCCGCTCACATGGCCCTCGACTCGAGGAACATAAGCGTCAACGACGACTCGTCGCACGTGCGACGGCAAGACATCGACTCCGGGGAGAGCGAAGTTTCGAGCGACACTTGCTCCGATCAGATGCTGCGCTTTCCAAGCTTCGCCGACGTCGATATACGGCACGACGCGCCGAACGAGCGGCAAACCCAGCCTCTGTGTCTTCCGCGggacgagattttcaaagattcGTTGAACATTCCGAATTGCCAGAGTACACCGAGAAAATTGCACAAATGCGGTCTCTGCGAAAAATCATTCTTGCAGAGATCGAAATTGATAGCGCACAATCTCCGGCACACCGGTCAGCGGCCTTACGCCTGCATCCACTGTGACAAAGCTTACACTTCGAGGAGCAAGCTGAACGCTCACACGAGACTCCACACTCTGGTGAACGTTCATCGTTGCGAGATATGCGACAAAACCTTTCCGTATCCCTCGTATCTCGCGGAGCACTCGAGGATTCACGAGTCGTCGAGAGCCACGAGCAGTCTCAGGAGACCGAAGGAATTCGAGTGCTCGATGTGCAGCAAGCAGTTCAGTCTCCTGAAGAATTTGAAGGCCCACCTGAGGCTCCACACCGGCAAGGGTCTGTTCCGATGCGAGATATGCCACAAGGCATTCAGTCAGAAGTACAATTTGAAAGTTCATCTGCGAACTCACAATGCCGCCGGTAAATTCTTCAAGTGCAACTACTGCGGAAAATCGTTCGGTGCGCGAGGCAATTTCGTCGAGCACCTTCGCATTCACACCAAGGTCAAGCCGTTCGAGTGCGGCATGTGCGCGAAGAGCTTTTCGCAATCGAGTCACCTCAAGACTCACGAAGCCACCCACAACTCGCTGAGGCCCCACCAGTGCAGATTGTGCGGCAAACGCTACAAACTCGCGGCTCATCTGAGGAGACACGAGAGTACACACAGTGCGACCGAGTCTTACAAGTGCGAACTCTGCGATCAATTGTTTTCGCAAGCATTCAGCCTAAAGAGACACCTCAAGAGGCACAGCGACGCGCAAATATGA
Protein Sequence: MFIVTKEIDSENISKLCRTCLREDGDKMVCLFVGPAGSSLAAKLRTLSCLEVWQGDGLPEKLCDRCVTRAESALLYREQCRAADLALREAASQVSRAALDAAVPSSKLYHQQKVFTPVQTSHKSQKCSECGAIFGTYQELCAHSQAHLPFVREARPVQHMNIVESQGVSGYMSADSRLEKTSGLLPGAFAPQGIIETVSPAKNGRAACALHCSICNHTFTNRVQLINHHGLNHCREDVETSCDDDNLAIVADPKITDIRTGSFERSIGQSVHSGIQNLSYSRNNEVPIEAINYSAHMALDSRNISVNDDSSHVRRQDIDSGESEVSSDTCSDQMLRFPSFADVDIRHDAPNERQTQPLCLPRDEIFKDSLNIPNCQSTPRKLHKCGLCEKSFLQRSKLIAHNLRHTGQRPYACIHCDKAYTSRSKLNAHTRLHTLVNVHRCEICDKTFPYPSYLAEHSRIHESSRATSSLRRPKEFECSMCSKQFSLLKNLKAHLRLHTGKGLFRCEICHKAFSQKYNLKVHLRTHNAAGKFFKCNYCGKSFGARGNFVEHLRIHTKVKPFECGMCAKSFSQSSHLKTHEATHNSLRPHQCRLCGKRYKLAAHLRRHESTHSATESYKCELCDQLFSQAFSLKRHLKRHSDAQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00721444; iTF_00058894; iTF_01364850; iTF_00058134; iTF_00905582;
90% Identity: iTF_00058894;
80% Identity: -