Basic Information

Insect: Exephanes ischioxanthus
Gene Symbol: -
Assembly: GCA_958510785.1
Location: OY294020.1:11091194-11093705[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0019 0.16 12.8 0.4 2 23 126 147 125 147 0.95

2 11 0.0032 0.27 12.1 4.2 2 23 211 233 210 233 0.88

3 11 0.0051 0.43 11.5 1.9 1 23 383 405 383 405 0.96

4 11 0.00013 0.011 16.5 1.6 1 23 411 433 411 433 0.94

5 11 2.8e-06 0.00023 21.8 0.6 1 23 439 461 439 461 0.98

6 11 1.6e-05 0.0014 19.3 1.2 1 23 476 498 476 498 0.98

7 11 2.2e-08 1.9e-06 28.3 3.6 1 23 504 526 504 526 0.99

8 11 2.6e-06 0.00022 21.8 0.4 1 23 533 555 533 555 0.99

9 11 5.8e-06 0.00049 20.7 1.5 1 23 561 583 561 583 0.97

10 11 0.00026 0.022 15.6 4.2 1 23 589 611 589 611 0.98

11 11 7.8e-06 0.00066 20.3 1.8 1 23 617 639 617 639 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0019	0.16	12.8	0.4	2	23	126	147	125	147	0.95
2	11	0.0032	0.27	12.1	4.2	2	23	211	233	210	233	0.88
3	11	0.0051	0.43	11.5	1.9	1	23	383	405	383	405	0.96
4	11	0.00013	0.011	16.5	1.6	1	23	411	433	411	433	0.94
5	11	2.8e-06	0.00023	21.8	0.6	1	23	439	461	439	461	0.98
6	11	1.6e-05	0.0014	19.3	1.2	1	23	476	498	476	498	0.98
7	11	2.2e-08	1.9e-06	28.3	3.6	1	23	504	526	504	526	0.99
8	11	2.6e-06	0.00022	21.8	0.4	1	23	533	555	533	555	0.99
9	11	5.8e-06	0.00049	20.7	1.5	1	23	561	583	561	583	0.97
10	11	0.00026	0.022	15.6	4.2	1	23	589	611	589	611	0.98
11	11	7.8e-06	0.00066	20.3	1.8	1	23	617	639	617	639	0.99

Sequence Information

Coding Sequence: ATGTTCATCGTGACGAAGGAAATAGACAGCGAAAATATAAGCAAACTATGTCGGACCTGCTTGCGGGAGGACGGCGACAAGATGGTCTGCCTGTTCGTCGGTCCCGCTGGTTCTTCTCTCGCTGCGAAGCTGCGAACGCTTTCGTGTCTCGAGGTGTGGCAGGGAGATGGTCTTCCGGAAAAGCTATGTGATCGTTGCGTCACCAGAGCAGAGTCCGCACTGTTGTACAGAGAGCAATGCCGGGCAGCTGATCTGGCACTGAGAGAAGCAGCATCCCAGGTTTCCAGAGCCGCTCTCGACGCAGCGGTTCCCAGCTCCAAGCTCTACCACCAGCAGAAAGTCTTCACGCCGGTTCAGACTTCTCACAAGTCTCAAAAATGTTCGGAGTGCGGTGCAATTTTTGCCACCTACCAGGAGCTCTGCGCTCACAGCCAGGCCCACTTGCCCTTCGTCAGAGAGGCGAGGCCAGTTCAGCACATGAACATCGTGGAGTCTCAGGGTGTTTCGGGATATATGAGCGCCGATTCCCGACTGGAGAAGACCTCTGGACTCTTGCCGGGCGCGTTCGCGCCGCAAGGAATCATAGAGACCGTCTCGCCGGCGAAAAACGGTCGAGCCGCCTGCGCTCTTCACTGCTCGATATGCAATCACACTTTCACCAACAGAGTACAATTGATAAACCATCACGGCTTGAACCACTGCCGCGAGGACGTCGAGACCTCCTGCGGCGACGACAATCTCGCGATCGTCGCCGATCCCAAGATCACCGACATTCGCACCCGAAGTTTCGAGCGAAGTATCGGTCAGTCGGTTCACAGCGGTATACAAAATTTGTCGTACAGCCGCAACAACGAGGTGCCCATCGAGGCGATAAATTACTCCGCTCACATGGCCCTCGACTCGAGGAACATAAGCGTCAACGACGACTCGTCGCACGTGCGACGGCAAGACATCGACTCCGGGGAGAGCGAAGTTTCGAGCGACACTTGCTCCGATCAGATGCTGCGCTTTCCGAGCTTTGCCGACGTCGATATACGGCACGACGGGCCGAACGAGCGGCAAACCCAGCCTCTGTGTCTTCCGCGggacgagattttcaaagattcgTTGAACATTCCGGATTGCCACAGTACACCGAGAAAATTGCACAAATGTGGTCTCTGCGAAAAATCATTCTTGCAGAGATCGAAATTGATAGCGCACAATCTCCGGCACACCGGTCAGCGGCCTTACGCCTGCATCCACTGTGACAAAGCTTACACTTCGAGGAGCAAGCTGAACGCTCACACGAGACTCCACACTCTGGTGAACGTTCATCGTTGCGAGATATGCGACAAAACCTTTCCGTATCCCTCGTATCTCGCGGAGCACTCGAGGATTCACGAGTCGTCGAGAGCGACGAGCAGTCTCAGGAGACCGAAGGAATTCGAGTGCTCGATGTGCAGCAAGCAGTTCAGTCTCCTGAAGAATTTGAAAGCCCACCTGAGGCTCCACACCGGCAAGGGTCTGTTCCGATGCGAGATATGCCACAAGGCATTCAGTCAGAAGTACAATTTGAAAGTTCATCTGCGAACTCACAATGCCGCCGGTAAATTCTTCAAGTGCAACTACTGCGGAAAATCATTCGGTGCGCGAGGCAATTTCGTCGAGCACCTTCGCATTCACACCAAGGTCAAGCCGTTCGAGTGCGCCATGTGCGCGAAGAGCTTTTCGCAATCGAGTCACCTCAAGACTCACGAAGCCACCCACAACTCGCTGAGGCCCCACCAGTGCAGATTGTGCGGCAAACGCTACAAACTCGCGGCTCATCTGAGGAGACACGAGAGTACACACAATGCGACCGAGTCTTACAAGTGCGAACTCTGCGATCAATTGTTTTCGCAAGCCTTCAGCCTGAAGAGACACCTCAAGAGGCACAGCGACGCTCAAATATGA
Protein Sequence: MFIVTKEIDSENISKLCRTCLREDGDKMVCLFVGPAGSSLAAKLRTLSCLEVWQGDGLPEKLCDRCVTRAESALLYREQCRAADLALREAASQVSRAALDAAVPSSKLYHQQKVFTPVQTSHKSQKCSECGAIFATYQELCAHSQAHLPFVREARPVQHMNIVESQGVSGYMSADSRLEKTSGLLPGAFAPQGIIETVSPAKNGRAACALHCSICNHTFTNRVQLINHHGLNHCREDVETSCGDDNLAIVADPKITDIRTRSFERSIGQSVHSGIQNLSYSRNNEVPIEAINYSAHMALDSRNISVNDDSSHVRRQDIDSGESEVSSDTCSDQMLRFPSFADVDIRHDGPNERQTQPLCLPRDEIFKDSLNIPDCHSTPRKLHKCGLCEKSFLQRSKLIAHNLRHTGQRPYACIHCDKAYTSRSKLNAHTRLHTLVNVHRCEICDKTFPYPSYLAEHSRIHESSRATSSLRRPKEFECSMCSKQFSLLKNLKAHLRLHTGKGLFRCEICHKAFSQKYNLKVHLRTHNAAGKFFKCNYCGKSFGARGNFVEHLRIHTKVKPFECAMCAKSFSQSSHLKTHEATHNSLRPHQCRLCGKRYKLAAHLRRHESTHNATESYKCELCDQLFSQAFSLKRHLKRHSDAQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059624;
90% Identity: iTF_00058894;
80% Identity: -