Ates012367.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- -
- Assembly
- GCA_963565655.1
- Location
- OY751423.1:2720485-2724508[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.7e+02 3.1 7.7 2 23 202 224 202 224 0.97 2 20 0.0093 0.78 10.4 1.9 1 23 304 326 304 326 0.97 3 20 0.011 0.92 10.2 0.5 1 23 375 397 375 397 0.98 4 20 0.0079 0.66 10.7 0.3 1 19 432 450 432 452 0.95 5 20 0.056 4.7 8.0 1.9 1 23 465 488 465 488 0.96 6 20 7.4 6.2e+02 1.3 7.5 2 23 494 515 493 515 0.95 7 20 0.00037 0.031 14.9 0.5 3 23 541 561 539 561 0.96 8 20 2e-06 0.00017 22.0 0.2 2 23 589 611 588 611 0.96 9 20 5e-05 0.0042 17.6 0.2 1 23 617 640 617 640 0.94 10 20 0.0014 0.12 13.0 0.3 1 23 651 674 651 674 0.96 11 20 5.3e-05 0.0044 17.5 0.9 3 23 684 704 682 704 0.92 12 20 0.0077 0.65 10.7 0.0 2 20 761 779 760 779 0.95 13 20 0.00036 0.03 14.9 0.0 2 23 798 819 797 819 0.97 14 20 0.00023 0.019 15.5 0.5 2 23 835 856 834 856 0.96 15 20 0.00011 0.0095 16.5 0.3 1 23 876 899 876 899 0.91 16 20 0.07 5.8 7.7 0.3 2 23 976 998 975 998 0.95 17 20 9.6e-05 0.0081 16.7 1.5 2 23 1020 1042 1019 1042 0.94 18 20 0.12 10 6.9 0.3 1 23 1048 1072 1048 1072 0.95 19 20 6.5 5.5e+02 1.5 0.9 1 23 1077 1100 1077 1100 0.82 20 20 0.15 12 6.7 0.1 2 23 1131 1153 1131 1153 0.93
Sequence Information
- Coding Sequence
- ATGGATGAAGTCGTTGAATTGGAGAGTTTTCACAATGTGTGTAGACTCTGTCTATCAACGGACGAGGCCAATTCACCAATATTTGGCGTTCAAGAGAGCAATTTACAGTTGGCAGAGAAAATACAAGTTTGCTTATCAATTGAGGTGTCttctgatgataaattgaCAACGCTCATTTGTGGGAGTTGCAGCAAGAGTGTCAATCAGTGGCACACGTACCGAGAATCATGTCTGAGGTCACAAGAGACGTTACAGAGATGGCTAGCCAAGCGTGGAGATCTTatAACAAACATCAAATCGGAGCCAATCGACCCAGAGGAATCGGACATGTACCACGACACGATGGATCATTCGGACGGTTTCCCAGAGGACGCAGCTGACACTCCCAGAGGCTCGAAACGTCGACGCTCCTCCAGTCTTCCGTCCTCAGACGTTGAATCAGTAAGTGGCACCAGGCTTCTCCTGAACCCAATGGCAGTAGCTGCCAAAGAGATTCTCGAGCCAGCCCAGCCTGACCCCTACAATCCCCTCCGTTTAGCACACCGCAAAAAGCTAAAACGTCGCCAAAATACCCACTTCCGTGGTGTAAAAGTGTTCAAACGTAAGTGTCCCCACTGTAAGATACATTtgcattcaaaattttcatactcAAAGCACATGGAGAGATATCACCGTGGTGCAACAATGaatccatcatcatcatcatcaaaaaatccgGAAAGACGTAACGGTCCATTGTCATTTACTCTAGCTATTGATAAATCAGACGGAGTTGATGCTGATGACGACGATGACGGTGATGATGAGGAAATTGAGATGGTTGAGGACGTTGAGGACGAGCTGATATCAATGGAGAAGAATTCGCCATTGACGCAGGTTCAAGAGAACATAATAAGCCAGTTGAAGACATTCTCGTGTTACTCGTGCCAGCAGGTGTTCAGCGATCGTCGTAGCACATTGAATCACATACGCCAGCACATGCCAGACTTGCGTCCATACACTTGTATAGCATGCCTAACTGAATTTCCAGATCGTTCAATCTACAAACTCCACTGTGGTGCGTCCTTCGAGTGCGCTATGAAGATAGCCCTCGTTGTTCCAAAACACGGTACTGAGAAATACTTCACGTGCAACATGTGCCTTAGACCATTGCCAAATCGTAAAGAATTACTTAGTCACTTATCCAAGCACTCGGACAAGCAGTACGAGGCTCTAACTAGCAGTGTCCCCAAGTCGCCGCCGAAGCAGAAGCCAACGCAGGGCCCATATCGTCATGGAGATCCAGCGCACAATCACACGTGCGACTACTGCGGCATGATCTATCGCTACAAGCCAAACATGCTGAAACACGAGGATCTCTGCAAACGTCTGCCACCTGATGAACGAACCTCCTACCGCTGTGCTCACTGCGGCATGACGTTCCTCGTCTTCAAGAAATTCCAATCACACATAAATATCGAGCACAATCGCAAGGAATTGGTTTGCTTCACTTGCAACTCAAAGTTCAAGCATTCCAACGAGTACCTGGagcatcatcagcatcatcgCAGTGGTGGAAAATTGGAGACCAAGTGGAAGACTTATAATTCGAGTTTGCCAAGAATCACGATGAAATACGGCTGTCCAGTGTGCCCGAAGGAGTTCATGACTAAGGAGGAATTGATACAGCACAGGAGTCATCACTCGAAGGTGAAGGGTCTGGAGAGCAGTGAGATTGATGACGAGAGCAATTATGagatgaatgataataatgggAAGAATACAGAGTGCGTGACTTGCGGTAAAATATTCGCTAATTATCCGAATTTGAGGAGGCACATAAGAACGGTGCACATTATTGAGGGACGATTTAGTTGTCCAAAGTGTCCAAAGACGTTCACGAGTGAGGATCTCTGGAATCAACATGCAGAAAGAGCTCATCCGAAGGATGTTGCCGTTGATGGCACAGGATTCCGGTGCCTGCAGTGCAAGAAGGTACTGGACACGCAGGAGGGCTTGAATAATCACCTGCAGGAGGAGCACGGAATGGCGGAGGACGATCATCTTGCTTGCGACATCTGCGGCAAGCGATTCAGCAATGAGACGTCTCTGAAGATCCATCGAGGCCATCACTTCCGCCGTGACTCTCGTCTCAGCATCAGAACATTACCGCATCCATTGGACCAAGTGCAGGTGGAGCTGCAAGAGGGCCCGAATGAGTTGACCCTGACGCCACGACCGGCTAAAGCAAAGAAATCTTTCCCCTCGCCGACCTTCAAGCAGCCGTCTCCAGGTAATCTCCAGTGCGCCGTTTGCGACGAGGCCTTCGCCGACGTCACGGAGTTACGCAAACATCTTTGGGAGGTGCACTGTACGAAGCACAAGAGCGAAAAACCGTTCGTCGGTGACCTCCAGTGCGAGCTGTGTACAAACGTCTTCCCGGATTCTCAGGCCCTTGAGGAGCACATGAGGTGGCACAAGGAGAATCCAATCTTGGCTGATGTCCCCAGACCCATTGACATCTCCTGCGACATATGCGGAAAGTACTACAGCTCGACAAAGGCACTGTGGAAGCATAAAAAACTCCACAAGGCAACCGCCTCGGGAATGAAGTTCCACTCACTGAAGAAAATAGTGCCAATTTCGTTTCCCTGTCCTGTCTGTAAAAAAGTGTTCAACAATGAGACCTCGATGAAGAAGCACAAGGCAGCGGCGCATTATGTGCGAAAAACGAGCGGATCCATTGCGAGAAAAGCTGCAGCGGAAGCAGCAGCTGcggctgctgctgctgccgcTGTAGCGCAAGCTGTCTCGCCGGTCAGAACCGACGATGAAACACGACCAAAGAGACCGAAACTAGACTTCGACATTATTCGCAAAGCCTATCATCTTGGGGAACCCTCTGGGAGCAGCTTCGGAACACCAAACTCATCAAAGAAACCAGTAACTTGCGGTATTTGCAAGAAACTTTTGCCAAGTATGAGCTCACTCTACAAGCATCGTCAAAATGTTCACAAAACTAGCATCGGCAAACCGCTTGAGGTGGACGAGGGCGAGGTCAATGAGGGCGATGGTGTACCATGTACTGAGTGCCACAAAGTCTTCTCCAATACAGCTAATATGAAGCAGCATTACACAAAAGTTCATGGCAACGGTGACAAACATTACTGCACAATGGACGACTGCGATGAGGCCTTTGACACTTCATTGGCTAAACAGGCGCATGAAAAAATACACATGAATGTACTTTACAGATGTACACTCTGCTCGAGGCACATGTTCAATCGTAGTGCAATCGACAGTCATCTTGCTAATGAGCACGGTGAAGAcgtgaatgatgaaaaaagtgataaacagttttataaaaaaactgatttggGAAGTTACGCTGTTAAGGGAGCCGATGGACGGGTTTGTCCAATTTGTAAGATTAAGTATCCCAATATTAAAGCTATGAAAATACATTATGTTAAAATACACGAGGGAGCAAGTTAA
- Protein Sequence
- MDEVVELESFHNVCRLCLSTDEANSPIFGVQESNLQLAEKIQVCLSIEVSSDDKLTTLICGSCSKSVNQWHTYRESCLRSQETLQRWLAKRGDLITNIKSEPIDPEESDMYHDTMDHSDGFPEDAADTPRGSKRRRSSSLPSSDVESVSGTRLLLNPMAVAAKEILEPAQPDPYNPLRLAHRKKLKRRQNTHFRGVKVFKRKCPHCKIHLHSKFSYSKHMERYHRGATMNPSSSSSKNPERRNGPLSFTLAIDKSDGVDADDDDDGDDEEIEMVEDVEDELISMEKNSPLTQVQENIISQLKTFSCYSCQQVFSDRRSTLNHIRQHMPDLRPYTCIACLTEFPDRSIYKLHCGASFECAMKIALVVPKHGTEKYFTCNMCLRPLPNRKELLSHLSKHSDKQYEALTSSVPKSPPKQKPTQGPYRHGDPAHNHTCDYCGMIYRYKPNMLKHEDLCKRLPPDERTSYRCAHCGMTFLVFKKFQSHINIEHNRKELVCFTCNSKFKHSNEYLEHHQHHRSGGKLETKWKTYNSSLPRITMKYGCPVCPKEFMTKEELIQHRSHHSKVKGLESSEIDDESNYEMNDNNGKNTECVTCGKIFANYPNLRRHIRTVHIIEGRFSCPKCPKTFTSEDLWNQHAERAHPKDVAVDGTGFRCLQCKKVLDTQEGLNNHLQEEHGMAEDDHLACDICGKRFSNETSLKIHRGHHFRRDSRLSIRTLPHPLDQVQVELQEGPNELTLTPRPAKAKKSFPSPTFKQPSPGNLQCAVCDEAFADVTELRKHLWEVHCTKHKSEKPFVGDLQCELCTNVFPDSQALEEHMRWHKENPILADVPRPIDISCDICGKYYSSTKALWKHKKLHKATASGMKFHSLKKIVPISFPCPVCKKVFNNETSMKKHKAAAHYVRKTSGSIARKAAAEAAAAAAAAAAVAQAVSPVRTDDETRPKRPKLDFDIIRKAYHLGEPSGSSFGTPNSSKKPVTCGICKKLLPSMSSLYKHRQNVHKTSIGKPLEVDEGEVNEGDGVPCTECHKVFSNTANMKQHYTKVHGNGDKHYCTMDDCDEAFDTSLAKQAHEKIHMNVLYRCTLCSRHMFNRSAIDSHLANEHGEDVNDEKSDKQFYKKTDLGSYAVKGADGRVCPICKIKYPNIKAMKIHYVKIHEGAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00047443; iTF_00046425;
- 90% Identity
- iTF_00046425;
- 80% Identity
- -