Basic Information

Insect: Alcis repandata
Gene Symbol: -
Assembly: GCA_949125135.1
Location: OX421230.1:4540111-4558619[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5 1.9e+03 -0.4 0.1 19 26 419 426 414 429 0.87

2 17 0.032 40 5.0 1.6 13 30 482 500 471 509 0.72

3 17 0.01 13 6.6 2.0 6 38 504 536 502 537 0.73

4 17 0.045 56 4.5 2.9 5 33 531 555 529 565 0.81

5 17 0.00097 1.2 9.9 5.7 15 38 568 592 555 595 0.85

6 17 0.026 32 5.3 2.8 6 35 588 617 587 621 0.74

7 17 0.038 47 4.8 3.0 6 33 612 643 610 649 0.72

8 17 0.035 43 4.9 3.8 5 38 643 676 639 676 0.78

9 17 0.002 2.5 8.8 0.6 6 38 672 704 670 705 0.82

10 17 0.075 94 3.8 5.0 8 38 702 732 697 739 0.81

11 17 0.039 49 4.7 5.4 13 38 734 760 727 766 0.81

12 17 0.063 79 4.0 2.5 6 30 756 780 755 794 0.74

13 17 0.063 78 4.1 3.6 18 38 795 816 783 817 0.82

14 17 0.0033 4.1 8.2 2.6 5 33 811 839 809 845 0.81

15 17 0.0097 12 6.7 1.5 14 33 847 867 839 873 0.75

16 17 0.0005 0.62 10.8 4.1 6 38 868 900 865 906 0.87

17 17 0.012 15 6.4 1.2 18 38 907 928 901 928 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5	1.9e+03	-0.4	0.1	19	26	419	426	414	429	0.87
2	17	0.032	40	5.0	1.6	13	30	482	500	471	509	0.72
3	17	0.01	13	6.6	2.0	6	38	504	536	502	537	0.73
4	17	0.045	56	4.5	2.9	5	33	531	555	529	565	0.81
5	17	0.00097	1.2	9.9	5.7	15	38	568	592	555	595	0.85
6	17	0.026	32	5.3	2.8	6	35	588	617	587	621	0.74
7	17	0.038	47	4.8	3.0	6	33	612	643	610	649	0.72
8	17	0.035	43	4.9	3.8	5	38	643	676	639	676	0.78
9	17	0.002	2.5	8.8	0.6	6	38	672	704	670	705	0.82
10	17	0.075	94	3.8	5.0	8	38	702	732	697	739	0.81
11	17	0.039	49	4.7	5.4	13	38	734	760	727	766	0.81
12	17	0.063	79	4.0	2.5	6	30	756	780	755	794	0.74
13	17	0.063	78	4.1	3.6	18	38	795	816	783	817	0.82
14	17	0.0033	4.1	8.2	2.6	5	33	811	839	809	845	0.81
15	17	0.0097	12	6.7	1.5	14	33	847	867	839	873	0.75
16	17	0.0005	0.62	10.8	4.1	6	38	868	900	865	906	0.87
17	17	0.012	15	6.4	1.2	18	38	907	928	901	928	0.93

Sequence Information

Coding Sequence: ATGAATCCGGAACACCACAATATTAACCCGGGTGGTGGTCAGCCCCCTGGGAGTTCAGAGTCCCAAGGGCAGAGAGTGCAGGCTGCACAACAGCAGCAGCAGGGAAGCTTGCCTGCTACAACATCTGCCACGGATTTACGAGTGAATACAGCAGCTGTAAATGTGGCTTTGTCCAGCGTAGCAAAGTATTGGGTATTTACGAACTTATTCCCTGGACCAATTCCACAAGTCTCTGTGTATGGACTACCCACTGGAACTAGAATTGAAAACGGAAAACCTGTACAGGACATTGGTCAACATGCAAGCATACTTAACGGTGACCCCAACATCATACTGGGCCATCATGGTGGACAGTCACAGGTTACTGTTTCCGCGGGTAATCAACAAATACCTGTATCACAAATCATTGCCACACAATCAGGGCAGACACATGAAGCGCTGGTTGCACACAGCCAGGAGCTGGTGCAGGCCGGGGCAGGGGCCCAGGTTTCGGTCGGCAGCCAGCCAACCCACCAGCAGGTACCCAATAACCGGGTCGAATTTGTACAACACCATAACATTGATATGGGTCATCACTCACAACAACACATTCTGCAGCAGCAGCTAATGACGGCGCGCCCTGACCACACCAACCAACAGATCCAGCTGACGGTCAGTGAAGATGGTATCGTGACGGTCGTCGAGCCTGGCAATAGTAAGATGGTGGACAAAGAAGATCTGCATGAGACTATCAAACTACCGTCCGACCATCCCTTAACCATCCACCAGTTGCAGCAGATTGTGGGTCAACAGCTCGGTACACAAGTACTagaaaacgtggtccgaattgAGCAAGCTACAGGCGAGCCGGCCAATATTCTCGTCACACACAATGCGGACGGAACCACTTCTATTGAAGCGAGCGCCTCAGACCCTCTCTCCAACGTGAAAGATGAGAAAAATCAAGGAAAGATGGAGACGGCACAGTTTGCTATACCTGCGGAGATAAAGGACATCAAAGGCCTCGATTTAAAAAGTGTAGGAGCGATGGGTATGGAAGGTGCAGTCGTGAAGATATCCACCGGAGCGGATAACGACATGACGGCTATGTACAAAGTCAATGTGGAAGACCTTTCGCAGTTGTTGGCGTATCACGAAGTTTTCGGGAAACTGAATACTGATGGCCAGTCGCAAAACAAAcAGGGTGAAATAGAAATCGAAGTACCGGGCCCTAGCCAGATGTCAGAAGCAGAGTCGTCACCCGGCCACCATGCCTGTGATATCTGCGGGAAAGTCTTCCAGTTCCGATATCAACTTATAGTTCACAGACGGTACCACGGCGAAAGCAAACCCTACAGTTGCCAAGTCTGCGGCTCGTCGTTCGCCAACCCGGTCGAATTATCGCGACACGGAAAATGCCATCTTGCCGGAGATCCAGTGGAGAGACACGCGAAGAGGATGGCCCAGGACAAACCCTATGCCTGCACAACTTGCCATAAAACTTTCTCACGTAAAGAACATCTAGACAACCATGTACGGAGTCACACTGGAGAAACACCCTACAGATGTGAGTTCTGCGCGAAGACGTTCACCCGCAAGGAGCATATGGTGAATCATGTGCGCAAGCACACGGGAGAGACGCCGCACCGCTGCGACATTTGCAAAAAGAGCTTTACACGGAAGGAGCACTTTATGAACCATGTCATGTGGCATACAGGTGAAACGCCACATCAGTGCCAAATTTGTGGCAAGAAGTATACTAGAAAGGAGCATCTGTCGAACCATATGCGATCTCATACGAACGACACGCCGTTCAGGTGTGACCTGTGCGGCAAATCTTTTACAAGAAAGGAACATTTCACAAATCACATTATGTGGCATACTGGCGAAACCCCCCACCGCTGCGACTTCTGTTCTAAAACCTTCACCCGAAAAGAGCACCTGCTAAACCACGTCCGTCAGCACACGGGCGAGTCCCCTCACCGCTGCAACTTCTGTTCAAAGTCGTTCACGCGGCGCGAACACCTCGTGAACCACGTGCGACAACACACTGGGGAGACGCCCTTTCAGTGCGGATACTGCCCGAAAGCGTTCACTAGGAAAGATCATCTCGTGAACCACGTCCGGCAGCACACGGGCGAGTCCCCGCACAAGTGCTCGTTCTGCACGAAGTCGTTCACCCGCAAGGAGCACCTCACCAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCACGTACTGCGCGAAGAGCTTCACGAGGAAGGAGCATCTCACCAACCACGTCAGACAGCACACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCGTTCTCGCGCAAGGAGCACCTCAACAACCACGTGAGGCAGCACACGGGGGTCACGCCGCACGCCTGCTCCTATTGCAACAAGAGCTTCACGAGGAAGGAGCATCTCGTCAACCATGTCAGGCAACACACGGGCGAAACTCCGTTCAAGTGCACGTATTGTTCGAAGTCGTTCTCTCGCAAGGAGCACCTCACCAACCACGTGAACCTGCACACGGGCGAGACGCCGCACAAGTGCCCCTTCTGCACAAAGACATTCTCCAGGAAGGAACACCTCACCAATCACGTCAGAATCCACACCGGCGAGTCCCCCCATCGCTGCGACTTCTGCCAGAAAACATTCACCCGCAAGGAACACCTCACGAATCATCTAAAGCAGCACACGGGCGATGCCGCACACACCTGCAAGGTCTGCTCTAAGCCTTTCACGAGGAAGGAGCATTTGGTCACTCATATGAGATCTCACAGCTGCGGCGAGAAGCCGTACAGTTGCGGCGAGTGCGGAAAGTCTTTCCCTCTAAAAGGGAACCTCATGTTCCACGAGCGCTCGCACCAGaagggcggcggcgcgcgccccTTCCGCTGTGATGTGTGCTCGAAGGACTTCATGTGCAAAGGGCACCTGATCACGCACCGACGCACGCACGCGGACGCGGGCGCGGAGCCCGAGGCGGAGGCGCGGCCCGCCGCCGACGAGTGCAGCGCCAAGTGCGTCAAGGTGGAGGCCGAGCCTAGCGAGCCGGAGTGCAAGCCCAAAATTGAAGAAGTGTGGTCACTTACTGAAAATCTCATAGTACCACATCCAGAGACCTCGCCAACCAACGCTGCTGTGATGCAGATAACAAACCAACAACCCCGCTCCGTGACCGGCTCTCCCGGCATCCCAGCAACGTTCACGCACACGGAGTCCGCGCAGCACCACGCCGGCGCGGCGATCGCCCACCACCCCGTCAGTGTGACCTACTAG
Protein Sequence: MNPEHHNINPGGGQPPGSSESQGQRVQAAQQQQQGSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIGQHASILNGDPNIILGHHGGQSQVTVSAGNQQIPVSQIIATQSGQTHEALVAHSQELVQAGAGAQVSVGSQPTHQQVPNNRVEFVQHHNIDMGHHSQQHILQQQLMTARPDHTNQQIQLTVSEDGIVTVVEPGNSKMVDKEDLHETIKLPSDHPLTIHQLQQIVGQQLGTQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLSNVKDEKNQGKMETAQFAIPAEIKDIKGLDLKSVGAMGMEGAVVKISTGADNDMTAMYKVNVEDLSQLLAYHEVFGKLNTDGQSQNKQGEIEIEVPGPSQMSEAESSPGHHACDICGKVFQFRYQLIVHRRYHGESKPYSCQVCGSSFANPVELSRHGKCHLAGDPVERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCQICGKKYTRKEHLSNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGVTPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDAAHTCKVCSKPFTRKEHLVTHMRSHSCGEKPYSCGECGKSFPLKGNLMFHERSHQKGGGARPFRCDVCSKDFMCKGHLITHRRTHADAGAEPEAEARPAADECSAKCVKVEAEPSEPECKPKIEEVWSLTENLIVPHPETSPTNAAVMQITNQQPRSVTGSPGIPATFTHTESAQHHAGAAIAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00143231;
80% Identity: iTF_00044702;