Aput006711.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- -
- Assembly
- GCA_943137145.2
- Location
- CALPBO020000255.1:64808-65275[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-11 3.5e-08 33.3 0.0 1 40 9 48 9 52 0.94
Sequence Information
- Coding Sequence
- atgccccccaagcgagcattgtggtctgaggaaaacctggaagcggcggtacgagcagtacagtgtggacggctgagcacttacaaagctgtcgaaaggtacaaagtgcccagaagaactatcaggaaccaccttcagaccggcagtttgaaaaaagtcttgggtcgaaaacctttacttagcgacgaacaagaggctgaacttgtgagtagaattttgaggtttgctgatataggtttacccgtgacaccaaggattctccgacgcttagtcttcaaattttgcgagcttaataacatcaggcatcccttcaatcaacaaaataaagttgctggtaaagattggtttaaaaaatttatggggagacatccggagattgcacgtagaaaggctcagtttatgaacccagccagggctcaaaagctgaataaatttatagtagacgaccactttaagaggctgaattaa
- Protein Sequence
- MPPKRALWSEENLEAAVRAVQCGRLSTYKAVERYKVPRRTIRNHLQTGSLKKVLGRKPLLSDEQEAELVSRILRFADIGLPVTPRILRRLVFKFCELNNIRHPFNQQNKVAGKDWFKKFMGRHPEIARRKAQFMNPARAQKLNKFIVDDHFKRLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00007943; iTF_00775194; iTF_01218259; iTF_00942746;
- 90% Identity
- iTF_00007943;
- 80% Identity
- -