Aexc029263.2
Basic Information
- Insect
- Agrotis exclamationis
- Gene Symbol
- retn
- Assembly
- GCA_950005045.1
- Location
- OX465431.1:13684902-13695231[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-20 3.4e-16 60.9 0.0 16 89 15 86 10 86 0.94 2 2 4.6 1.7e+04 -2.3 0.0 25 38 213 226 175 229 0.55
Sequence Information
- Coding Sequence
- ATGATTAACTGCAGACAGGAAGACGGATTGACAAATAGTCGTTTAGGCACTCCAATAAACCGACTACCAATAATGGCGAAGTCGGTGCTGGACCTGTATGAGCTGTACAACTTGGTAATTGCTCGCGGCGGGTTGGTGGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGGTTACGGCTCCCGTCTTCCATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTATGACTATGAGTGCGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGACGCAGCCATTGAAGGTAACAAGCGTGAGGGACGTCGCGCCTCTGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCTGCGTCTCTCGCGCAGCTGTCACAACACATGCAGCCGTTGTCGCTGTCACTGGGGGGCGTAGCCCCGAGGCTGCCACCACTTCCACCGCACGCGCCGCACCTTGCTCAGCACGATATTGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCTCCCAGCAACGGACAAGCGCCAATTATGTCACCTCGCGATGCTGCTCTCAGTGCCATAGATGTGTCCCGCCTCACGCTCTGGTCTCTCTACAACAATAACAACAACAACAGCCCACAACCGGACCTAGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTTTGACGAGCGGCGGCAAGCGCGAGGCGTGTCGctcgcccgcgccgcccgccaagCGCCGCACGCCGCGCCCCCCCTCGCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCACAGCACCGCCACAGCCGCAGGGACACCACGTCGCCGCCACAGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCTTTCAAGATTACCACTAGAGGAGACGCGAGCACAGGTGACCAACAACTAGTGGTATCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTGTTCCCCTCAGGCAACGGACAGAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MINCRQEDGLTNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPPSRPASPRDHLHSPQHRHSRRDTTSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -