Acla005972.1
Basic Information
- Insect
- Agrotis clavis
- Gene Symbol
- SPOP
- Assembly
- GCA_954870645.1
- Location
- OX940919.1:27254078-27255219[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-21 9.4e-19 69.1 0.0 10 108 187 291 179 293 0.92 2 2 0.34 2.3e+02 3.4 0.1 78 109 293 324 290 325 0.90
Sequence Information
- Coding Sequence
- ATGTACGAACCACGTATAGGAGATCCTGAAGTTAATAAACTAAACATCACGGCTACGGACGTGGTGTTTGGGCATCGTGCATGCCAGACTCGTGAAGTAAAATGGCTGTGTTTAGAGAACATATACCAGAAGTTCTACCGGCCAAATTTCTACGACATCGGCGGCACCTACATGCAGGATGTGGCAGATTACTGGTTCTCGTACAAAACAGAACAAATCGGTAACACATTCCTCCTCCATCTGTTTATCTGTAATCACGGAGTTAGCTCCTTCAGTGTTGCTTTGAGCTGCAGTAATAAATTCAAGGTTGATAAAAAAACAGACACTGTGTACCTGCAACAGTACCTCAAAGAGTTTCAGTTCAAACAACTCACTGAGCTGTCTCATTCTTACCTCACCACTTATAATTTCACAGAACTAGACATACAATGTTTGAAAAACAGGAAGTTGTATATAGCTGTATCATTCCCCTTTGCTGATGCTGAAGGAGTTAGTCTAGAAGTCATTGATAACATCAAACTTAACCATGACTGCAGTGCTCTCTTTGCTGACCCTATTGGCTCAGATTTTGTCATTGAATCTGCTGACGGTGTTAAGTTTCACATACACAAAGTCATACTTGCTGCCCACAGTGAAGTCTTCAAAGCAATGCTTAAAGGGGGCCTCCCCGATAACCTCAGCTTTGCAGAAAGCCagaataattatgtcaaacttATTGACCTAAATGGGGAAGATCTGAAGTATATGCTAGAATACATTTACACAGGAACCGTTAAGGATATAGAAAATACTAACTTTGGTAACTTACTGATTCTTGCAGACAGATACAACTTGAAAGGTTTATGGGAGCTCTCTGAATATGCTCTCTCTGAGCAAATGACCATAGATAATGCTTTAGATATTCTAATAGTTGCTGATATTTACAATTCAGAGTTTCTCAAATCCGAGGCAATGAAATTTATTAAACAGAACAAAGAAGTACTTCAAACTAGTTCATTCAATGAAATTACAAACCATGAATTGCTCAAGCAATTGTGTACTTTTATGACTGAATAG
- Protein Sequence
- MYEPRIGDPEVNKLNITATDVVFGHRACQTREVKWLCLENIYQKFYRPNFYDIGGTYMQDVADYWFSYKTEQIGNTFLLHLFICNHGVSSFSVALSCSNKFKVDKKTDTVYLQQYLKEFQFKQLTELSHSYLTTYNFTELDIQCLKNRKLYIAVSFPFADAEGVSLEVIDNIKLNHDCSALFADPIGSDFVIESADGVKFHIHKVILAAHSEVFKAMLKGGLPDNLSFAESQNNYVKLIDLNGEDLKYMLEYIYTGTVKDIENTNFGNLLILADRYNLKGLWELSEYALSEQMTIDNALDILIVADIYNSEFLKSEAMKFIKQNKEVLQTSSFNEITNHELLKQLCTFMTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00043720; iTF_00041046; iTF_00042809; iTF_00041946; iTF_00772162; iTF_00300398; iTF_01339075; iTF_01340365; iTF_01062020; iTF_00447409; iTF_00973925; iTF_01085542; iTF_01084417; iTF_00301347; iTF_00685604; iTF_01533220; iTF_01027495; iTF_00888424; iTF_01029417; iTF_01064810; iTF_00446380; iTF_01031277; iTF_00712078; iTF_01534095; iTF_00928848; iTF_01028466; iTF_00850931; iTF_00445364; iTF_01030394; iTF_01230778; iTF_01532255; iTF_01535072; iTF_00449323; iTF_00111815; iTF_00302286; iTF_00375474; iTF_01063896; iTF_00745945; iTF_00425601; iTF_00908065; iTF_00851971; iTF_00122564; iTF_01285700; iTF_00120677; iTF_01440229; iTF_01538917; iTF_00017478; iTF_00121606; iTF_00177318; iTF_00383846; iTF_00450310; iTF_00123527; iTF_00622983; iTF_00726600; iTF_01118473; iTF_01526217; iTF_00050090; iTF_00667690; iTF_00037963; iTF_00810251; iTF_00952844; iTF_00906317; iTF_00907181; iTF_01342349; iTF_00786126; iTF_00375471; iTF_00758416; iTF_00036977; iTF_00124433; iTF_00147665; iTF_00038995; iTF_00237907; iTF_01026483; iTF_00951988; iTF_00171989; iTF_00374359; iTF_01094199; iTF_00783672; iTF_01527480; iTF_01117497; iTF_00785338; iTF_01095098; iTF_00784539; iTF_01441243; iTF_00071645; iTF_00924925; iTF_01247261; iTF_00273758; iTF_00274558; iTF_00809310; iTF_01093278; iTF_00018303; iTF_00173215; iTF_00364191; iTF_01119519; iTF_01425248; iTF_01062970; iTF_01192862;
- 90% Identity
- iTF_00043720; iTF_00041046; iTF_00042809; iTF_00041946;
- 80% Identity
- -