Acla026721.2
Basic Information
- Insect
- Agrotis clavis
- Gene Symbol
- retn
- Assembly
- GCA_954870645.1
- Location
- OX940932.1:15903578-15910885[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-20 1.7e-16 61.8 0.1 16 89 36 107 24 107 0.92 2 2 4.5 1.9e+04 -2.4 0.0 25 38 234 247 196 249 0.54
Sequence Information
- Coding Sequence
- ATGGGAGGGCTGCTCTTGTTTCGGGTATTAGCATTTTGGGCTGAAGGTTCTATTTGTTTGTGTAAGGTCAAAAGTTGTGTGGTGGAATTTAATAATGTGTATTATAAAGGCACTCCAATAAACCGACTACCAATAATGGCGAAGTCGGTGCTGGACCTGTATGAGCTGTACAACCTGGTGATTGCTCGCGGCGGGTTGGTGGAGGTCATCAACAAAAAGCTGTGGCAAGAGATCATCAAGGGGTTACGGCTCCCGTCTTCCATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTCTATGACTACGAGTGCGAGAAAAAGAACCTATCAACCAGGAGTGAACTGGACGCAGCCATTGAAGGCAACAAGCGTGAGGGTCGTCGCGCCTCTGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCCCAGCACATGCAGCCGCTATCGCTGTCTCTGGGGGGCGTAGCCCCGAGGCTGCCACCACTTCCACCACACGCGCCGCACCTGGCCCAACACGACATCGAGTATAGGGTGCGGGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCCAGCAATGGACAAGCgccaataatgtcacctcgcgACGCCGCCCTCAGTGCCATAGACGTGTCCCGCCTCACGCTCTGGTCTCTCTAtaacaataacaacaacaacagcCCACAACCGGACCTTGAGCCGCAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTTTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGctcgcccgcgccgcccgccaaGCGCCGCACGCCGCGCCCCCCCTCGCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCGCAGCACCGCCACAGCCGCAGCCACACCACGTCGCCGCCACAGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCTTTCAAGATTACCACTAGAGGAGACGCGAGCACAGGTGACCAACAACTAGTAGTATCAATAGAGCTGAACGGAGTAACGTATGAAGGTGTACTTTTCCCCTCAGGCAACGGACAGAATGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MGGLLLFRVLAFWAEGSICLCKVKSCVVEFNNVYYKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPPSRPASPRDHLHSPQHRHSRSHTTSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- iTF_00043264;