Alyc014893.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- clz9
- Assembly
- GCA_963680765.1
- Location
- OY796855.1:12225140-12227890[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-10 4e-07 31.1 0.0 1 41 14 55 14 58 0.85
Sequence Information
- Coding Sequence
- ATGCCGCGAACTTatataagaaagaaaattaaatcaTACACTCCACAAGATTTATCTCAAGCGATCGCAAAGGTAAAAAATGGAGAACTTACGCAATATAGAGCAGCGCAACAGTACAAGATTCCCATGACGACTCTTCATGAACACTTAAAACAAGGTAAAGAAACTACTAGACCAAATGCAGGTAGGCCAACTGTTATAGACCTAGAAGATGAGAAAAAATTTGCAGAAACTGTTAGAATTATGGAAAAATGGGGATATGGCCTAACTAGGTTTGAAATTATGGAGCTTGTCGCGGAATATGTGCGGGTGAATAAGATTAAAACACCATTTAAAAACAATGTCCCAGGAACAGATTGGTTCATTAATTTCCGGAAACGACATCGGTTATCAATTAAAAAAGCACAGCCTGTAGAATTCGTAAGAAGAAAAATGACAGATCCATTCGTCATTGGTGAATATTTCGATTTGTTGGAAAATACACTAAAAGATTTGGATCTTTTTGAAAGTCCCCAATTCATTTGGAACTTAGATGAGACATCGTTATGCCTGGATCCATCCAGAACAAAAGTAGTTGGACAAATAAACAAACCTTGTGCGAGGACCACCCATGGGAGTGGAAAAGAAAACATCACCGTGTTGACAGGTGCAAGCGCTAGTGGCAAGAAGTTGCCGCCTTTGATTGTATTTAAAGGCAAATTTGTTTGGGATCAGTGGATGGCTGAACTGGACGGTGGTGATTACGATTTCGAATTATCGTATGCAGCCAGTACTAAGGGGTGGATGGAAACAGACATTTTCTATAATTATATGGAAAAAGTTCTTATCCCAAGTCTGGGCGAAGAGCGCCCGgttcttattatttatgatgGTCACTCAACTCACGTCAATGTTAGAGTTGTGGAGCTGGCAATCCGAAACCGTGTCACAATACTTAAACTACCGCCACACACATCACATTTGCTGCAGCCTCTTGATATAGCAGTATTCAAGTCATTCAAGTCAATATGGGATGCGAAGCTGGTAGACTGGCAGCGTAGAAATGTTGGCACGAAAATGCCAAAAAAAGTTTTCGCTCAAGCGCTGGCAGATACTTGGCAAGAAACAAACCCCGAAATAATCAAAAGTGGATTTAGAAAAGCTGGGATTTTCCCTTTTAATTCGCTCGTGATACCTGTGGACAAGTATGATCCAGATGCATACAAAAGATTCCAAAAAAAGATATCAGAAATACATTTTGCATCCACAAAACCAACACCCAAAAATCCGAAGTCACTGAAAGGAATTTGTATTGGCTTCTTTAACAATCAACTTTCCACCACTAATGATGCTTTTGAAAATGCAAACACCGATAACGATACCTTACTGTTGCAAGTTTCAAAGCCCAGTATCCAAACTTTGAGTTTTGCGGCCAAAGAGCCAACCCAACTACCtccttgtttaaaaaaatcgtcaaaCACTGATGAGATTACCTTGCTATCTCAGGTATCGAAATCTGATATCCAGACGTTGAGTTTTGTGGCAAAAGAGCCATCCCAAATACCTATATGTTTACAGAATTCTAATCAAACACAAACTcaaaatttgtcaaaaataaaaataatctcgaACGTTATCATCAAAAAAGCACCTCAACAGTTCCTTCAAGCCCAACCACTACCCGAGTCATCATGCACATTCGAAGAATTGCTTTTAAGAAAAATACAACAGGACAAAAAAGATAATCAACAGACAAAAAAGAAACGTGTCACTAAAGGTGCTGAAGTAATAACTGCAAAAATGGGTAAGAACATTTTAGAAGAAACGAAAAAAGCTCAAGGTTTGAAATCGATACCTAAAAAAACcagtaaaatttacaaaaaaagaacaacaagAGTAAAAAAAGAGGAAGATTCTGAAATTACAATACTAAGAACACAACAACCAGGCCCTTCAGGCAtaagaaataagaaaaaacgAAAACGCCAGCCTTCACTTGACAGCATAACTAGTGTATCTGACATCATGAGCGAAAATAGTGATTCCGATATTGAATGTGTTGATTTAAAAGAATTGACGGATGAATGTTCTGAAAGagattttcaaaaatgtaaCGAAGAACTAAGGTCACGGAAAAAAACAAATGATGTTAAATatggtaaaataataaaaaaatgtgaaaattttaacgtCGAAAATATACTctctaataaaaattcaaaCTCTCTCTGTAATAAGGGTAAAGGTATAGGCAAAAAAAGCAAAGGGAAAGAAAACAAAGTAGACGAAAAAGTCAAAGAAAATGAAGAGGAAAGATATGTTGAAAGAAATTTCGAATACGATATTGATGTTTttactaaagaaaaaaatatgacaactaAAGAAGACTCTAAAGAAAAAGACAACGATGAACAACTGCTACTTAAACAGGAAAGTAAAGAAATAGTATACGAAACTCAAGAAAAGAACCTTGCTATGAAGGAAAATTACCAATTAAAGGATTCAGTACTCGTCAGATATTTGGTGAGAAAAAAATGGAAGTATTATGTGGggttcatagaaaaaataattaaaaatgaagaaaaCATATTATACTTCAATATCGATTTTTTAAAAACCATAAGACCACAGCAGCGCCTTACCTTTATAACGACCAAAAGAAAAGATATTGATGAAGTTCCAGAGTCATTAATAGTGAAGaagatagatttaaaaaaaaacgataaagaATATTACTTATGTAATAACGacgataacatttattttagctGA
- Protein Sequence
- MPRTYIRKKIKSYTPQDLSQAIAKVKNGELTQYRAAQQYKIPMTTLHEHLKQGKETTRPNAGRPTVIDLEDEKKFAETVRIMEKWGYGLTRFEIMELVAEYVRVNKIKTPFKNNVPGTDWFINFRKRHRLSIKKAQPVEFVRRKMTDPFVIGEYFDLLENTLKDLDLFESPQFIWNLDETSLCLDPSRTKVVGQINKPCARTTHGSGKENITVLTGASASGKKLPPLIVFKGKFVWDQWMAELDGGDYDFELSYAASTKGWMETDIFYNYMEKVLIPSLGEERPVLIIYDGHSTHVNVRVVELAIRNRVTILKLPPHTSHLLQPLDIAVFKSFKSIWDAKLVDWQRRNVGTKMPKKVFAQALADTWQETNPEIIKSGFRKAGIFPFNSLVIPVDKYDPDAYKRFQKKISEIHFASTKPTPKNPKSLKGICIGFFNNQLSTTNDAFENANTDNDTLLLQVSKPSIQTLSFAAKEPTQLPPCLKKSSNTDEITLLSQVSKSDIQTLSFVAKEPSQIPICLQNSNQTQTQNLSKIKIISNVIIKKAPQQFLQAQPLPESSCTFEELLLRKIQQDKKDNQQTKKKRVTKGAEVITAKMGKNILEETKKAQGLKSIPKKTSKIYKKRTTRVKKEEDSEITILRTQQPGPSGIRNKKKRKRQPSLDSITSVSDIMSENSDSDIECVDLKELTDECSERDFQKCNEELRSRKKTNDVKYGKIIKKCENFNVENILSNKNSNSLCNKGKGIGKKSKGKENKVDEKVKENEEERYVERNFEYDIDVFTKEKNMTTKEDSKEKDNDEQLLLKQESKEIVYETQEKNLAMKENYQLKDSVLVRYLVRKKWKYYVGFIEKIIKNEENILYFNIDFLKTIRPQQRLTFITTKRKDIDEVPESLIVKKIDLKKNDKEYYLCNNDDNIYFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00038663; iTF_00038665; iTF_00038666; iTF_01155013; iTF_01154990; iTF_01154991; iTF_01154992; iTF_01154993; iTF_01154994; iTF_01158667; iTF_01158668; iTF_01158669; iTF_01158670; iTF_01153812; iTF_01158666; iTF_01153810; iTF_00301100; iTF_00072110; iTF_00121366; iTF_00851720; iTF_00851721; iTF_00122320;
- 90% Identity
- iTF_00122320;
- 80% Identity
- -