Alot012113.1
Basic Information
- Insect
- Agrochola lota
- Gene Symbol
- ZNF711
- Assembly
- GCA_947364205.1
- Location
- OX376243.1:13875014-13895628[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.12 9.2 7.4 0.7 1 23 114 136 114 136 0.97 2 12 0.22 17 6.6 4.1 1 23 143 165 143 165 0.97 3 12 0.63 48 5.1 1.5 1 15 169 183 169 192 0.82 4 12 4.8e-06 0.00036 21.3 3.6 1 23 197 219 197 220 0.95 5 12 0.0016 0.12 13.3 0.9 2 23 227 248 226 248 0.97 6 12 1.1e-05 0.00081 20.2 0.7 2 23 262 283 261 283 0.97 7 12 0.36 27 5.9 2.8 3 23 289 310 287 310 0.95 8 12 6.1e-05 0.0046 17.8 3.1 2 23 321 343 320 343 0.96 9 12 0.099 7.5 7.7 0.8 1 23 350 373 350 373 0.93 10 12 0.0034 0.25 12.3 0.4 5 23 385 404 383 404 0.93 11 12 3.8e-05 0.0029 18.4 4.7 1 23 413 435 413 435 0.98 12 12 0.00066 0.05 14.5 0.4 1 23 440 463 440 463 0.97
Sequence Information
- Coding Sequence
- ATGGATGACTTTAATGGACAGATAGGACGATGTAATAATGTGGGGGAAGAATTCACAATAGAAAAAGAAACTAAAGATCTGAAATCAAAATTGCCGCTAAAGAAGAGATTTGAGAAGCGAGTCAAACCGGAAGATGGCGACTTCCCGAAGAAAGAAAAACCGGAAGAAAACAATGTCACTGAAGAAAATGAACAGCAAGTGGATAATTCTCAACCTAAGACGGAAACCCCCTTGATGTACTCCTACGAAACATTAAGGAACATAGAAATTGTGACCATCAACGAAGAAGAACGTCAGCAAGAGTACCAAGAGACGTTGAAGTCGCGTCAACACATGCGTCATGTGTGTGTACACTGTGCGCTCGGATTCGTGCTCAAACAGGCGTTTGATGTGCATATGAAGGTTCATTCTCCCCAATCAGGCGACCACGAGTGCTTACTCTGTCACTCCCGCCTCAAAACCGCTGACATGTTATACCGGCACCGCTTACGGCATTACCGCCGTTACCGGTGCCTGCTCTGCCGGACGCGGTTTAAAGATAAAGACACTGCCGCTTGCCATGTCATGAACGATCATGCCGGACAGACCTTCGAGTGCGATCATTGTGGAAGAGGATTCAAACGACCGCAGTACCTGAAGAGGCACGTGGAACAGCACCACACTAAGCCCCATCATCTTGAATGTGGCGTCTGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGGTCTCATATCAGGACACATAACGAAGAGGTACGAACCAAGACAGTGCGCCTACCAGTCACCTGCGAGATCTGTTCTCGTGACTACAAGAACAAAGCAAGCCTGAAGCGTCACCTTCTGACTCACGACGAGAACGTCCACTGCGAGATCTGTTACGAGAAGTGCAAGAATCGTATTACGTTGGGAAATCACTACTTGAAGGTGCATAATGAGAAATATGTTGGTGCGCCGGAACAGACTTGCCCGCATTGCGACCGGATCTGTGCGACACGTGCGATGCTCAAGCGACACATACAAAGGATGCACAGCGATAGAACTAAGAAATACCAATGTGATCACTGCCAGCGCCTCTACTTGACTAAAGGCGAGGTGCGGGCCCACATCACCTGGTCGCACATGCCGGCTGAAGCCCGAGGGGGGCACGCTTGCACGTGTGGTCGCATCTTCAGGAGCCCCTCGCTACTTCGCGACCATAAGGCCAGGTTCCATGCGTCACAGCCACCACCAAGGGTTCACCAGTGTGAACACTGTGATAAGGCTTTTGCGAACAAACAAGTGCTGAATCGTCACAAGAAAAGCCACTCCGACGAGATGTATCCCTGCAAAGAATGTGGATTACTATTCAAAACTCAACCGTACGTCAAAGTCCACTACCAAATCAAACACTTAAACATGACGAGAGCACAAATCAAGGCACAGAGGAAACTCAACAAGGAACAGTTAATACAGAATAATATACATAGAAGTACTAATTGGGAACCACCCATCTCTGACAAGAAGAAAAGTTCAGTTGCTATAGAAAATGAAGAAGACCCTCTTCTGGTTCAGGAGGGGGAGGTACAAATGAAATCGGAGAACGAAGATGATCTTCACCCTCTTCTAGTTCAAGAGGGCGAGATACAAATCAAATTGGAGAAGGAAGATGACCTTCAAATCCCGACGTTCCAAACCTTTGTTGATATTAGTAGGGAGTAG
- Protein Sequence
- MDDFNGQIGRCNNVGEEFTIEKETKDLKSKLPLKKRFEKRVKPEDGDFPKKEKPEENNVTEENEQQVDNSQPKTETPLMYSYETLRNIEIVTINEEERQQEYQETLKSRQHMRHVCVHCALGFVLKQAFDVHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRTRFKDKDTAACHVMNDHAGQTFECDHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRTKTVRLPVTCEICSRDYKNKASLKRHLLTHDENVHCEICYEKCKNRITLGNHYLKVHNEKYVGAPEQTCPHCDRICATRAMLKRHIQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHASQPPPRVHQCEHCDKAFANKQVLNRHKKSHSDEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKLNKEQLIQNNIHRSTNWEPPISDKKKSSVAIENEEDPLLVQEGEVQMKSENEDDLHPLLVQEGEIQIKLEKEDDLQIPTFQTFVDISRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01441398;
- 90% Identity
- iTF_00449573;
- 80% Identity
- -