Basic Information

Insect: Agrochola lota
Gene Symbol: -
Assembly: GCA_947364205.1
Location: OX376245.1:4082811-4139530[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.9 1.4e+02 3.6 0.9 2 23 489 510 488 510 0.90

2 18 0.002 0.15 13.0 0.0 1 23 520 543 520 543 0.95

3 18 0.0079 0.6 11.1 1.4 3 23 672 693 671 693 0.96

4 18 0.039 3 8.9 3.8 2 23 753 774 752 774 0.95

5 18 0.42 32 5.7 1.2 1 23 786 810 786 810 0.91

6 18 0.00014 0.011 16.6 0.3 2 23 817 840 816 840 0.97

7 18 0.16 12 7.0 0.3 1 23 846 868 846 868 0.93

8 18 0.0038 0.29 12.2 2.9 1 23 874 896 874 896 0.98

9 18 0.86 65 4.7 0.6 2 20 907 925 907 927 0.90

10 18 0.23 18 6.5 0.3 1 23 1006 1028 1006 1028 0.97

11 18 1.8 1.4e+02 3.7 7.6 1 23 1035 1057 1035 1057 0.96

12 18 0.0015 0.12 13.4 1.8 1 23 1101 1124 1101 1124 0.95

13 18 0.00078 0.059 14.3 0.4 1 23 1131 1154 1131 1154 0.98

14 18 0.017 1.3 10.1 0.2 2 23 1176 1198 1175 1198 0.96

15 18 0.0054 0.41 11.7 4.0 2 23 1223 1245 1223 1245 0.95

16 18 0.00019 0.014 16.2 1.9 1 23 1270 1292 1270 1292 0.98

17 18 0.00013 0.01 16.7 0.1 1 23 1298 1320 1298 1320 0.97

18 18 0.00043 0.032 15.1 0.7 3 23 1328 1349 1326 1349 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.9	1.4e+02	3.6	0.9	2	23	489	510	488	510	0.90
2	18	0.002	0.15	13.0	0.0	1	23	520	543	520	543	0.95
3	18	0.0079	0.6	11.1	1.4	3	23	672	693	671	693	0.96
4	18	0.039	3	8.9	3.8	2	23	753	774	752	774	0.95
5	18	0.42	32	5.7	1.2	1	23	786	810	786	810	0.91
6	18	0.00014	0.011	16.6	0.3	2	23	817	840	816	840	0.97
7	18	0.16	12	7.0	0.3	1	23	846	868	846	868	0.93
8	18	0.0038	0.29	12.2	2.9	1	23	874	896	874	896	0.98
9	18	0.86	65	4.7	0.6	2	20	907	925	907	927	0.90
10	18	0.23	18	6.5	0.3	1	23	1006	1028	1006	1028	0.97
11	18	1.8	1.4e+02	3.7	7.6	1	23	1035	1057	1035	1057	0.96
12	18	0.0015	0.12	13.4	1.8	1	23	1101	1124	1101	1124	0.95
13	18	0.00078	0.059	14.3	0.4	1	23	1131	1154	1131	1154	0.98
14	18	0.017	1.3	10.1	0.2	2	23	1176	1198	1175	1198	0.96
15	18	0.0054	0.41	11.7	4.0	2	23	1223	1245	1223	1245	0.95
16	18	0.00019	0.014	16.2	1.9	1	23	1270	1292	1270	1292	0.98
17	18	0.00013	0.01	16.7	0.1	1	23	1298	1320	1298	1320	0.97
18	18	0.00043	0.032	15.1	0.7	3	23	1328	1349	1326	1349	0.95

Sequence Information

Coding Sequence: ATGACGGAACCGCAACCACCATTGATCCTCTGCATGGAGAATGCGTCGGGAGAGGATGTGGCGCTCAGAATAGAACCCGATGATAACTTCCAGATGTTTCTTGATAAGGCCAGATCAATACTAGGCTTTGACGTGGACATTAACTCAATAACCAGAAACCAGCCCGTTTCACTATCAGAAAATGTATATCAATTTCTAGTAAACGCCGAACAAAACCTACAAGCGGACGAACTAACACAAAACTTTGACCAGATGTTGGACACCAACGATGGAGCCAACGACTTGGTCTACATATTGGACGATGGCACACAAATCCGTGCTTCACAAATACATTTCGACAATGATGATCCTTTAGTTGATTTGACAGCTGAGAAAATACCCTTTGTGAAATACGCTGATGGTGTCATTGATGAAGATGTGGATGATATTCATATTCAGGAAACGAAGAAGATTAATATTGTTGAAAGTCCTGTGTCTAGATGGTCGAGCGAAAATTCTAGTCCCAAATGCAGTTTCGCTAACTCTCTACCTTTCAAATTAGTATGCAATAATACGTCCGGTTTCGAAGCGCAATTCACGAAATATTTAGAAACAAATACAACGAAAACTTACGCTACCTTAAACCCAGTAACAACTCGAAATAAATCCCCAAAAAGTTTGATCAAAGATAATTTTAAGAACTATGATGATAGTTATCAGAGGAATGACAACTTGTCGTACACTCGAGAGGAGATTTTGAACATGTTCAAAGACTCCCCTATGACCTCACTGCCGTATGACCAGGGTTACAGTGAGAGGCGACATGTCCGGAAGACGGATCCTTCTAGACTTGTTCATAAGACTTGGAGTAAGCCTCTCTCTTATGTCGATATTGATGGGGTACTGATAGGGGAAAGCGAAAGCCAAATATGTTTTATTTGCGGCAAACATGTGGACAACAACGTAGATAAACTGTACCTATTCGATAATGAAGACCAACGGTTGCATAGATGTTCGCCTCAGAAGAAACAGTCGACTCAGCTAAAAATAATCTGCGAATGTTGTCTTAATGAAAACTTCACACCATGTAGAATGAAAAGCGCAAATCAATTCTTAAATCCAGATGAATTTCTCGTCATAAGAAATAATCAACAATACATCTTCCAAAAAGTTAAGAACTTCAATTTCACGCATATAAATAATGCTAAAGATATCATAAACAAGATAGAGAAGAAAATAGGCAAGGAAGAGTTTGTTAAAGTCGAAATTGGTTCTGATGGTGAAATTATTACCAAGCCCATAGACAATAGGTCTGAAAGCGTCATTATTGTTAAAGATGAGAAAGAGGCTAGTTCGAGTGACGTAGAGATTGTAGAGCCGGAACCAGAGATAGATAATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTGAAGGAGTTTTTAGGGAAATATCAACGCGATGACAGTGAAGTTACTGAGTTAAAATGCAGATTCTGTGAGCAAATCTTCTCGGATCTGGCGGCAGTGACAGATCACTGTGAAACGCACAAACATGACTTAGAGGACGGCGAAGTGTTTCCGTGTCCCCTCTGCAATTATGGTTATGCAAATTTGAAATGGCTGAAGGCACATGTGAAGGCGGCCCACGAGAAAACTGAAGCTCCTAAAATAGTAAAAGAAGAAAATGAACCTGTGAAAGAGGAGAATAAAGATGACGAAGAAACAAATGCTTCATCATCTGCTAAAGCCTCATCCCCCATTGCGACTCGCACAAGGAGTTCTAAAAAGGGAGATAGCGATAGAAAAGAGGATGAAAAATCGGATGATGATAAGGCTGATTCTAATGCTGAGGCGACGGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATGCCTAGACAGCAGTGAGGATGAGATCTGGATCGTTCAGACTGCTGATGTTGAAGCCACACAGGAGCTGCAGAAATTACTCTGTAGTGCTAAGGTTAAAGAAGATGGACAAGATGGTGAATCTGGGAAGACACCCAATTGTTTTAATTGCGGTCAAATATTCGCGAACGCGGATGGTCTTTCAAACCATCGCTGTAGAAACCATCGCAACCGTAAGCGAAAGTCGAAGGACAACATTATATGCATACCGACTGAGGAAGACTTCTTGAAGAGAGCTCAGGGTCGCCCCCGACCAACTGATACATCAGTAGACAACGATCTTCTTGCTACGCGTCGCCGAAAACGCCGCAGCCGGGAATTGACCTCCAACCCTCAGGTGGTGACCTGCCACAACTGTAACGAGTCCTTCACATCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGAAACATCAAACCAAGCCCGGTCAGACGGGCGCTACTCCTGCTCCGAGTGTGACGACGCTACCTTCACCACGGAGACGGAACTCTTCGACCACGTGCACTTCCAGCACGATAAGCAAAAGAGGTGGCAGTGTCCCGTCGAGGGCTGCGGGAAGACTTTCTTCCTCAGGGCAACCCTAACGAAGCACAGTCGCACGCACACAGACACGCGTCGTTATGTATGCGTCACATGTGACAAGAGGTTCTTAGACAAACAGACCCTAGATGAGCATGGAGTCACACATTTACAGATCAAACCCTTCCAATGCCACATATGCCTGAAGCAGTTAACCCGTCGCTCGCGGTTGCGTATGCATGTGCGCGCGCACGAAGAGGAATTGACGCCGAGGCTCGTGCGCGTTTGTGCGGTGTGTAGAAGGGCTTTTAGAGATCATCGGCATGCACAGGAGCATGCGTCAAAATCATCGGAATGTATCGAAGCGTTTGCAAACGAATTAAAAGAAGAGGCAGAGGAGGTGTCGGTACAGTTATCACCCACCAGTGGACTTGTCAAACATACCGTACAGATAGTTGAATCCCCGAAATTATCAAAGCCAATAAAACGCCAAGTGTCGGTCGAAGTGGGCGAACCACTTCTGTCTCAGTTACCTGATGAAGCGCGCGCTTTGATAAGGGTGGTTGAGATTGAGAAGGCGTTCCGCTGCGAGTTTTGTGAAGATGTGTTCTACTTGGAGGGCGGTCTGAACAAGCACCGCTCGATTCACAAGGGAGTCAAGAATCCCTTCAAATGCCACATCTGTAAAGTTAGCTTCGCCACATATTCCAGATGCACAACCCACAAAACAACCCATGGCTTCTACAAACGCTCACTAGCCGACGCTAAGAAACAAGCCGAGGGGCCCGCACAAGCCAACGCCGACTCCTCCGCACGCTCGGCTACCGGCATACTGGGATACGGCGACTTTCCTGTAGTCAAACACTTCTTGTGTGAGGACTGCGGCCGCTCATACCTGCACTGGACATACCTACAAGTACACAGACGCATGAAACACTCCAACGAGAACTTTCTGTACAGATGTAACCAGTGCGAACTGACCTTTCCCAACAGCTGGGGCCTCGCGTACCATCGTAAGAAGGTGCACGGCAAGACTGGAGCTGACGACCCTGGAACCACTAACAAGAGCACCAGGGATGATTATAGGATTCCATGTCGGGATTGCAGCGAGGTGCTGCCGAACAAAACAGCTTTATACAAGCATCGTAAGAAGGAACACAGCGATGCCACTACACGAGGTTATACTAAACCAGGCCTGTATGCGAGCGCAGCGACAGACTCCACAGGTGGGACGTGTTCCCATTGCCCCGCCACATTCACGCACTCGATTGATCTGCACAAACACGTCAAAGAGGTCCACGGCAAAGACGACGAGTCCTGTTTATCTTGCAAAAAGACATCGGCCACAGAAGGGACATGTCCGCGCCGTCCGCACACGTGTCCCGTCTGTGGACACGCCTTCCGGACGCTTTCTATGCGGAACGAACATCTCAGGGTACATACAGGAGAGAGACCGTTTCCTTGTGATGTGTGCGGAGTTGCGTTCAGGAGGTCCACAGCCATGCGGAACCACCGCCTCATCCACACGGGCGTGCGCGCGTGGGCGTGCGGGCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACGCACCTGCGGCTCAAACATCCGGCTACTATTGTAGTTGTAGAGGTAGAGGGCCTAAACCCGTCGTCTGAAGAAGTACTGAAGGCGCTCGCTGGACAAAACGTTCCGCACGACAAGCTCATAGAAATCACAAAGATGTCCTTCGCAAAGGGTTCAACGAGCGTGATCCCAACGTGCGCGCGCGCACTATCAGCTCTGAACAACGTGCCGCGCACACACGTCGCATGCATCAAGCCTTCACCAACACGTGTATTGGAACAGTTTCAACCAGCTCGACGCGGTCGTGGCATCGCTAAAAACCCGCGGCGACCCAAGATACTACAGCGACGGGAAGCGCAGCCAAACGACAGCTCTGCCTACCCCATCGTTGACGGCGAGGAGCTGTCAGATCTGAACATGCAACTCTTACTACGGGATGGCGTGCTCGTGAACGGGAGCCAAATGGTCCAGCTGCAGTTAGATGATGAAGAAATTGATGGAGTACCCACCATCTAG
Protein Sequence: MTEPQPPLILCMENASGEDVALRIEPDDNFQMFLDKARSILGFDVDINSITRNQPVSLSENVYQFLVNAEQNLQADELTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADGVIDEDVDDIHIQETKKINIVESPVSRWSSENSSPKCSFANSLPFKLVCNNTSGFEAQFTKYLETNTTKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKTWSKPLSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKQSTQLKIICECCLNENFTPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFNFTHINNAKDIINKIEKKIGKEEFVKVEIGSDGEIITKPIDNRSESVIIVKDEKEASSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQRDDSEVTELKCRFCEQIFSDLAAVTDHCETHKHDLEDGEVFPCPLCNYGYANLKWLKAHVKAAHEKTEAPKIVKEENEPVKEENKDDEETNASSSAKASSPIATRTRSSKKGDSDRKEDEKSDDDKADSNAEATEPPIIKTEVKQECLDSSEDEIWIVQTADVEATQELQKLLCSAKVKEDGQDGESGKTPNCFNCGQIFANADGLSNHRCRNHRNRKRKSKDNIICIPTEEDFLKRAQGRPRPTDTSVDNDLLATRRRKRRSRELTSNPQVVTCHNCNESFTSKVRLKFHMQFHETSNQARSDGRYSCSECDDATFTTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELTPRLVRVCAVCRRAFRDHRHAQEHASKSSECIEAFANELKEEAEEVSVQLSPTSGLVKHTVQIVESPKLSKPIKRQVSVEVGEPLLSQLPDEARALIRVVEIEKAFRCEFCEDVFYLEGGLNKHRSIHKGVKNPFKCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQAEGPAQANADSSARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHSNENFLYRCNQCELTFPNSWGLAYHRKKVHGKTGADDPGTTNKSTRDDYRIPCRDCSEVLPNKTALYKHRKKEHSDATTRGYTKPGLYASAATDSTGGTCSHCPATFTHSIDLHKHVKEVHGKDDESCLSCKKTSATEGTCPRRPHTCPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEVEGLNPSSEEVLKALAGQNVPHDKLIEITKMSFAKGSTSVIPTCARALSALNNVPRTHVACIKPSPTRVLEQFQPARRGRGIAKNPRRPKILQRREAQPNDSSAYPIVDGEELSDLNMQLLLRDGVLVNGSQMVQLQLDDEEIDGVPTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_01247427;
80% Identity: -