Basic Information

Insect: Agrochola lota
Gene Symbol: -
Assembly: GCA_947364205.1
Location: OX376248.1:2059538-2089511[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-09 4.4e-07 29.9 0.0 4 43 218 257 217 258 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-09	4.4e-07	29.9	0.0	4	43	218	257	217	258	0.93

Sequence Information

Coding Sequence: ATGAAGGAAGTTAACATAAATATAGAAGGCTATAATGTTAACGGGATATGTGTCGGCTGTTTGAATTACAATCGTCGAATGTTTTATCATCCCACAGTAAAAGAATGTTTTCGTTTGTTGGGAAATATCGATGTGCCAGATGGCCTAGAAGTCCAAGTGTGCTGGGAATGCCTGGCGCGCGTCAATGTTGCTATCAATTTCAAGGAACAGATACTAAAGTCTTACGACTTTCTTATTTCGTACTCTAAAGAGCACACATTCCTGGACTCTCCGACCGACTTCGACCCTCACGCCACAAGCAACATAGAGAGAACTGAAGTGGTGTGTTACGAGTGCGTGCCAGAGGCAGAAGTGGTGGAGGACAATGAGGAAGCGGTTGACGTTAAGGAGGAAGAGGAGTGTGAGAATAAATATGGTTTCGAGGTAGCAATAAAAGAAGAAACTTATGACGACCCATACTTCCAAGATATGCCAGCTGTTGACAATGATATCACATCGGATGAAGACGTGCAGCTTTCTAAACTTAAAGAGAAAGAGACGGAGAAAGGGAAGAAGAAGAGAAAGAGTGAAAAGAAGAAGGAAAGGGAGAGGGATAGAATGCCAACCAGCAAACGGCCGAGAAAGACGACAAGAGGTCTCTGTGACGTATCACAGTTTGAAGCTGCTTATGACCAAATAGTCAATCATGGGATGTCAGTACGAAAAGCGGGCAAAATGTTCAATATCACACACGTCACCCTACAAAGATACAAGAAAAGACGAGAAACCACAAATTTCCCTGTCAAAGTTGGCTATGCACGTAACAGTTTTTATACCCCAGAACAAGAAACACTATTAACAAAATATTTGAAAAAATATGCCGAGATATTTCCTGGGTTATGCGTAAAGGTAGTCAGAAAGTATGCCACGGAATTCAGTCAGAAACTGGGTTTGAAAACTCCGAAGCCTTGGGTTGATAATGAAATGGCTGGCATTGATTGGTATAAGAATTTCATTTACAGAAATAAAGCGTTGGAAGATAAAATTGCTCGGCAATCTGCCAAAGAAAAGGTTCAACATTTTTATGACAAATTGTGGAGTATATTATGCCAGTACAACTTTGGTTCTGAAAATATTTACTCTTTAGACGAAATTGGGGTTAATATTGAAGAGTTTAGAGATAAAATTTGGTTGATGACGACGAAAAATGGCCCGATAGCCTTGAAGGAGTCTAAAGTGATGTTCACTTATGCAGCCAACGCTAAAGGATATTTTATTCCCCCTTTATTCTTAATACCAGGAGAGAAAAAAAAAGAAACTTCGGAAAACAACGCTGAAGTCAAAATAGAAAAAGATTTGGTGGACTCCCCAAAACGTCAAAAGACTAAGAAGGACAAGAACCCCGACAAGAAGAGTAGGAAGCTAAAGAATCTCCCAGAAGAATTGGTAGAATTGTACACTATGAGTAAAGAAGAGATGTGGGCTATCAGAATTGAGGATCTGAACAGCAAGGAGTTTCAGAAGCTTAAATATAGGTGTGACGATTGCATCATTGCCTTCAACACGGAGAAATTGATGCATGACCATCTAAACGGAAAACATCAACCTAAAAGTGAAGACTGCCATCAATGCTCAATATGTCAAGCCTACTTCTTAACTAAAGACAACGTGGCCGCGCACAAGGCATTACATCAGCAAGGCTATAAATGTCGGGAGTGTGGCTTCAATACTACGCTGAAACGACGCATGTTGAAACATGTTGGGAGTCACGCTCCGAGTGGAGATGCTCATGTATGTCAGACTTGTGGGAGTAGCTTTAGCACAAAATCGAAATTAACATACCACCGCGGCGTCTGTTGTCAAGAAAGGCCACAATGCGACTGCTGTGGCAAAGTATTCGCTAACAAAATGACACTCAAGTACCACCTCAAAGTCCTGCCACAGAATAAAGATGATAAGCCCAAAGAAAAGTTGTTTATACCATGTAAAGGATGTGATAAAGTGTTCCATTCTAAGAAGAGTTATAGAGCGCATGTTGTAATCCACGACGGTCTAACCTACCCGTGCCCAATTTGCGGTAAACTGTTCCAATGGAAGCGCAACCTGGCGCGACACTCGCGCAACCATCGCGAGCGACAGGCGGGCAACTTGCACGAGTGTCGCGCTTGCAGCAAGACTTTCGCAAGCAGGGACTGCTACAACAACCACATGCGGCTCAGCAAGAAGCACGTTTCGCAGGATACTTTCCCACATGAATGTAACTACTGCGGAAAGAAATTCGCTACAAAATGGTGCCTGACCGACCATATCGACTGGGATCACCTGAAGAAAATCAAATACCAATGTAGCTTCTGTTTCAAGGCATTCAAAACAGCTAAAATTTTGGTAGCTCATGTCAATAATATACACGAGGGTAAGAAGAAAGAAGCAGAGGGCGAACATCTATGTGAAATTTGTGGGAAATCGTACAGGACAGTGAAACGTCTAAAAGGCCACGTATGGGCGATGCACACAAAACGGTCAAGCAGCAAGATATACAAATGTAAACTATGTCCGGCCACATTCATGTGGCAGACCAGCATATACAAGCATATGAAGATGATGCACGATAGCAACAAGAAGAGTAAGACACCTCGCGCCGTCCAACCAGTGAAGAAAGAAGAGCCCTACCCGGGAATCGAACTAGCTAATCGAATGCAGTACTTCCAGCAAAACATTGGAGGCAACTTAAATATAGTTCACATACAACCTTTGGGCATGCCTCAGAATATTGTTTAG
Protein Sequence: MKEVNINIEGYNVNGICVGCLNYNRRMFYHPTVKECFRLLGNIDVPDGLEVQVCWECLARVNVAINFKEQILKSYDFLISYSKEHTFLDSPTDFDPHATSNIERTEVVCYECVPEAEVVEDNEEAVDVKEEEECENKYGFEVAIKEETYDDPYFQDMPAVDNDITSDEDVQLSKLKEKETEKGKKKRKSEKKKERERDRMPTSKRPRKTTRGLCDVSQFEAAYDQIVNHGMSVRKAGKMFNITHVTLQRYKKRRETTNFPVKVGYARNSFYTPEQETLLTKYLKKYAEIFPGLCVKVVRKYATEFSQKLGLKTPKPWVDNEMAGIDWYKNFIYRNKALEDKIARQSAKEKVQHFYDKLWSILCQYNFGSENIYSLDEIGVNIEEFRDKIWLMTTKNGPIALKESKVMFTYAANAKGYFIPPLFLIPGEKKKETSENNAEVKIEKDLVDSPKRQKTKKDKNPDKKSRKLKNLPEELVELYTMSKEEMWAIRIEDLNSKEFQKLKYRCDDCIIAFNTEKLMHDHLNGKHQPKSEDCHQCSICQAYFLTKDNVAAHKALHQQGYKCRECGFNTTLKRRMLKHVGSHAPSGDAHVCQTCGSSFSTKSKLTYHRGVCCQERPQCDCCGKVFANKMTLKYHLKVLPQNKDDKPKEKLFIPCKGCDKVFHSKKSYRAHVVIHDGLTYPCPICGKLFQWKRNLARHSRNHRERQAGNLHECRACSKTFASRDCYNNHMRLSKKHVSQDTFPHECNYCGKKFATKWCLTDHIDWDHLKKIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRSSSKIYKCKLCPATFMWQTSIYKHMKMMHDSNKKSKTPRAVQPVKKEEPYPGIELANRMQYFQQNIGGNLNIVHIQPLGMPQNIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441431;
90% Identity: iTF_00121818;
80% Identity: iTF_00038174;