Alot009114.1
Basic Information
- Insect
- Agrochola lota
- Gene Symbol
- retn
- Assembly
- GCA_947364205.1
- Location
- OX376230.1:13496880-13504881[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 3.1e-16 60.0 0.0 17 89 52 122 46 122 0.94 2 2 3.8 1.1e+04 -2.6 0.0 25 38 250 263 212 268 0.60
Sequence Information
- Coding Sequence
- ATGGTGACCATTACATCGTCATGGCATAGAAAAGTTACACATAATCTTGCACATCAAAGCGAGGTGCACTATCAAAAGATGACCACCGTATCTTGGCCTTCGTACCCTTTAAGACCGCCGGCTTATGACTGCCCATCTAATAACAAAATACCAGGCACTCCAATCAATCGGCTACCGATAATGGCAAAGTCGGTGCTAGACTTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAATAAGAAGTTGTGGCAGGAGATCATCAAGGGACTGCGGTTGCCATCGTCCATCACGTCTGCTGCCTTCACGTTACGTACACAATACATGAAATACCTGTATGACTATGAGTGCGAGAAGAAGAACCTATCAACCAGGAGCGAGCTGGATGCAGCCATTGAAGGGAATAAGCGTGAGGGACGTCGCGCCTCTGGGCAGTACGATGCACAAGCTGCTTTAGCAATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCCCTGGGAGGTGTCGCACCGCGGCTGCCACCGCTGCCGCCGCACGCGCCGCATCTCGCACAACACGACATCGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCCAGCAATGGCCCAGCACCAATAATGTCACCTCGTGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTCTACAACAATAACAACAACAACAGCCCACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCAGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCTCCCGCCCCCCCTCGCCGCGCGCCGACCTGCACGAGGCGCAGCACCGCCACAGCCGCAGGGACGCCACGTCGCCGCCACAGATCAACGGCATGCCCAATGCCAACGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGAGGAGACGCGAGCACAGGTGACCAGCAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MVTITSSWHRKVTHNLAHQSEVHYQKMTTVSWPSYPLRPPAYDCPSNNKIPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPASRPPSPRADLHEAQHRHSRRDATSPPQINGMPNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -