Basic Information

Insect: Agrochola litura
Gene Symbol: -
Assembly: GCA_949152395.1
Location: OX424519.1:7831720-7835732[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.15 18 7.4 0.9 1 23 53 75 53 75 0.95

2 27 0.11 13 7.9 0.0 2 23 103 125 102 125 0.94

3 27 0.00014 0.018 16.9 0.4 2 23 146 168 145 168 0.96

4 27 0.00092 0.12 14.3 4.1 1 23 173 195 173 196 0.96

5 27 4.5e-05 0.0056 18.5 0.6 1 23 200 223 200 223 0.93

6 27 0.052 6.4 8.8 0.5 2 23 226 248 225 248 0.96

7 27 0.064 8 8.6 1.3 2 20 254 272 253 277 0.91

8 27 0.0069 0.86 11.6 2.3 2 23 322 344 321 344 0.94

9 27 2.7 3.3e+02 3.4 0.1 2 23 373 395 372 395 0.94

10 27 0.0042 0.53 12.3 0.0 1 23 417 440 417 440 0.92

11 27 3.5e-05 0.0044 18.8 0.9 1 23 445 468 445 468 0.95

12 27 0.00055 0.069 15.1 0.3 1 23 474 497 474 497 0.94

13 27 0.0029 0.37 12.8 3.2 1 23 534 556 534 556 0.96

14 27 0.039 4.9 9.2 0.1 3 23 585 606 585 606 0.96

15 27 0.0051 0.64 12.0 0.8 1 23 626 649 626 649 0.96

16 27 4e-05 0.005 18.6 0.5 1 23 654 677 654 677 0.96

17 27 0.0012 0.15 14.0 1.0 1 23 682 705 682 705 0.96

18 27 0.00081 0.1 14.5 1.1 3 23 709 730 708 730 0.96

19 27 0.021 2.6 10.1 1.3 2 20 738 756 737 758 0.93

20 27 0.0099 1.2 11.1 3.3 1 23 813 836 813 836 0.94

21 27 0.93 1.2e+02 4.9 0.0 2 23 909 932 908 932 0.94

22 27 1.9e-05 0.0024 19.6 0.1 3 23 939 960 938 960 0.94

23 27 0.0034 0.42 12.6 2.8 2 23 965 987 964 987 0.94

24 27 0.011 1.3 11.0 5.1 1 23 992 1015 992 1015 0.96

25 27 2.3e-05 0.0029 19.4 5.0 1 23 1019 1042 1019 1042 0.97

26 27 0.00027 0.034 16.0 0.3 2 23 1049 1070 1048 1070 0.96

27 27 9.7e-06 0.0012 20.6 0.6 1 23 1076 1098 1076 1098 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.15	18	7.4	0.9	1	23	53	75	53	75	0.95
2	27	0.11	13	7.9	0.0	2	23	103	125	102	125	0.94
3	27	0.00014	0.018	16.9	0.4	2	23	146	168	145	168	0.96
4	27	0.00092	0.12	14.3	4.1	1	23	173	195	173	196	0.96
5	27	4.5e-05	0.0056	18.5	0.6	1	23	200	223	200	223	0.93
6	27	0.052	6.4	8.8	0.5	2	23	226	248	225	248	0.96
7	27	0.064	8	8.6	1.3	2	20	254	272	253	277	0.91
8	27	0.0069	0.86	11.6	2.3	2	23	322	344	321	344	0.94
9	27	2.7	3.3e+02	3.4	0.1	2	23	373	395	372	395	0.94
10	27	0.0042	0.53	12.3	0.0	1	23	417	440	417	440	0.92
11	27	3.5e-05	0.0044	18.8	0.9	1	23	445	468	445	468	0.95
12	27	0.00055	0.069	15.1	0.3	1	23	474	497	474	497	0.94
13	27	0.0029	0.37	12.8	3.2	1	23	534	556	534	556	0.96
14	27	0.039	4.9	9.2	0.1	3	23	585	606	585	606	0.96
15	27	0.0051	0.64	12.0	0.8	1	23	626	649	626	649	0.96
16	27	4e-05	0.005	18.6	0.5	1	23	654	677	654	677	0.96
17	27	0.0012	0.15	14.0	1.0	1	23	682	705	682	705	0.96
18	27	0.00081	0.1	14.5	1.1	3	23	709	730	708	730	0.96
19	27	0.021	2.6	10.1	1.3	2	20	738	756	737	758	0.93
20	27	0.0099	1.2	11.1	3.3	1	23	813	836	813	836	0.94
21	27	0.93	1.2e+02	4.9	0.0	2	23	909	932	908	932	0.94
22	27	1.9e-05	0.0024	19.6	0.1	3	23	939	960	938	960	0.94
23	27	0.0034	0.42	12.6	2.8	2	23	965	987	964	987	0.94
24	27	0.011	1.3	11.0	5.1	1	23	992	1015	992	1015	0.96
25	27	2.3e-05	0.0029	19.4	5.0	1	23	1019	1042	1019	1042	0.97
26	27	0.00027	0.034	16.0	0.3	2	23	1049	1070	1048	1070	0.96
27	27	9.7e-06	0.0012	20.6	0.6	1	23	1076	1098	1076	1098	0.98

Sequence Information

Coding Sequence: ATGCACTGTCTTTGCTATCTCAAAAGtacaaaaagtaatttcttttcaGATTTGGAAACAGAGGTGACAAAGCACAGTGATAGTTATCTAAGGAGGAGGAATCTGCAAATATTATTCAACAACACAACATTGATACCTTTTAAATGGCGCGGCAAATACCTCTGCTTCTATTGCGGGGACGATACGAAGACGCCCGATCGTCTCCGGAAACACACGAAAGGCCACGGACCTTGCAGTGATAGCGACAGAGCTATAAGATTAGTTAAATCAGCTGATATAGAAATCAAAATAGACGTTTCCAATGTCTCCTGCGAGATTTGTTCAGAAAGTTTCCCATTTTTAGACGAAATTATTGACCATTTGATAGTTAAACACCAACTGCCTTTTGTGAAAAATGTAGAGATGCTGTTATCAGCGTACAGGCTGTTAGATCTTCAGTGTCTCCTTTGCGATAAAACCTTTAATTACTTACGTAAATTAATCAGCCATATGAACGTCGCTCATCCTAATAACAGCTTTGAGTGTTCCGAATGTAAAAAGAAGTTTAATAAAAAGAGAGATATGGATTCGCACATAAGATTACATCATAAGGAGTACCATTCTTGTACCAAATGCGATGAAACGTTTCCAACTAACTCTGCGTTACAGATTCATAGGGCTAACGCTCATTCTTCGACGTGTAACATCTGCTTCCAAGTATTTGCTTCAGACAGCAAGCGGTTAGCTCATCAGAAATCTGACCACGATTCCAATCAGAGCCAATGTGGATTTTGCAATAAAGTTCTAACAACAAAACAAGCCTTTATAAGACATGCTGCAAATTGCGAACATAAACCTCAAGAAGAAATTGTCATAATTGATGACGAAGACAAAAAAATGTCCGTAAAAGATATAAGAAAAAGTTTAGCATGTATCTTTAACATGACTACCGCACTACCTTTCAAATTCTTTATGAATAGACTACGATGTTTCTATTGTACGAAAGACTTCACCTCATGCGAGGGTTTAAAAGAACATACGTCGATAGAACATCCCCACTGTGATATAACCTTTAAATCTATGAGGTTAAGGAACAGATATGACGGTGTCCAAGTCAAAGTTGATACTTCTTCTTTGTCTTGTAGATTATGCCAAGTCACCTTGCAGGATTTGAACGACTTGATTGACCATTTGAGTAAAGAGCATAAGGTGAAATGCGACTTTTCTGTCGAGACTTATCTGCAGCCGTTCAAACTTATTAAAGACAAGTACCCTTGCCCTATTTGCGGGGAAGTCTACAGATATTTTGGCGTTTTACTCAAGCACGTCAGTGCGTCTCATAGCGGCAATAAACATATATGCATGTATTGCGGCAAAGCGTTCAGAACTGACCCTAATCTTAGAGCTCATATTTCGAGGCGTCATAAAATCGCTGAGAATCACAAGTGCGGTAATTGCGATCTAGTATTTGGGACTAATGGTGCGTTAAGAAATCATCAAGGCTCCGTTCACGATGGTTTGCCAGGGCCGTACGAAGGCTGTACCTCTGAGAGACGAcggaaaaacttgaaaatactgTTCAACAACACTACCATCATGCCATTTAAATGGCGGGGCAAATACCTTTGCTTTTATTGCGGTAAAAACTATACAGAATACACAGAATTTAGAAAGCATACAAAATCCCATGGACTGTGCACCACAAAAGATTACTCCCTTAAACTAATCAAAGGAAATAACATCGAAATTAAAATCGACGTCTCCGAAATCGGTTGTGATATCTGCAATGAACCCTTCAGCAGATTCGAAGAAATAATCGATCATTTGATCAGTAAACACAATATGGAATACaacaaaaatatcgatataccCTTCCAGGAATATCGATTAGTCGATTTTCGATGTTTGTACTGCGAAGAACAGTTTTCTTATTTCGGATATTTGGTTAAACATGTTAATAACGTTCACCCGCAGAACTGTTTTATTTGTGATGATTGTGGAGTTACTTTCAACAAGAAGAGGGATTTGTCTATACATTTAAGGAATTACCACAGACAAGGAGGATACCCCTGCGATTTGTGCTTGAAGAATTTCGAAACTCGCCTTACGTTACGGAGGCATCAAAATAACATGCATTTTAGGCACTGTAAGAGCTGCGGTTTGCGTTTTGCGTCCCTTTCTCTCTTACAAAAACATGTACAAGTTGATCATCCCCAAAATGAGAGTAATATGAAGTGCAATTACTGCTCCAAAGAGTTCCACACTTCTTTAGGTTTAAGACAACATGTAAGCAAATGTAAAGTCAAAATTATTTCTCAAGTCGAACCCCCCCACACTTCTTTCCTTAACGACAGTAACATAGAAcctaagaaaaaacaaaatatactaCAAATAAGACAGAATATACAGTGTGTACTCAACATGTCGACTGCTGTGCCTTTCAAATTCTTTTCCAAATACTCCTGCTTTTATTGCTCAAAGAAATTTGTTGAATTTGACGAGTTACGCCACCATACCAGTCTTGAACATCCTGTATGCGACTTGAAGTCCAAATGCATGAAGAAATGCAAAGGAGAAAGGATAGCTGTCAAAATTGACATATCTACATTAGCTTGCAAAATATGTTGCCTCCCTATGCCTAATTTAGAAGATTTAATCAACCATTTAATAAACGAACATAAGGCGAACTATGATACGTCAATTTCGGGGTGTTTAGAGCCTTTCAGAGTTATAAAAGACAATATGCCATGTCCTATATGCCCGGATACCGTCTTCCGATACTTCGGCATTTTGCTCCGACATATGAACTCGGAACATAGCAACAACAACCGAATCTGTGACTTCTGTGGCCGAAGCTTCCGTAACGCGGCAAATCTAAACGTGCACATAACCTACGCACATACAGGTTCCTGCGAATGTGACATATGTGGGGTCAAGTACAAGAACCAATGGTGCTTGGCGCGACACAGAGCAAGGACACACGATGCGAAGGACCACAAATGTCCAAAATGTCCCGAGCAGTTCCAATCACAGTATCATAAGCaaaaacacttaataaaaatgCATAATGTGGGACACAAATGTAGTTACTGCGGGAAAATGTTTACAAGAAATTCCTTCATGAAAGACCATGTTAGGCGTACACATTTGAAGGAAAAGAACATTCCTTGTTCCATTTGTAATGAGAAGTTTTTCGATAATTATCTTCTGAGGATGCATATGGTAAAACACGAGGGGGATAGGAAATTTAGTTGCACTGTTTGTGGAAAAGCCTTTTTGAGACGAAGTAATTTGAGCTCGCATATGGAGATGCATAAAAAGTATGGGCATGTGCAAATACAGATTTAA
Protein Sequence: MHCLCYLKSTKSNFFSDLETEVTKHSDSYLRRRNLQILFNNTTLIPFKWRGKYLCFYCGDDTKTPDRLRKHTKGHGPCSDSDRAIRLVKSADIEIKIDVSNVSCEICSESFPFLDEIIDHLIVKHQLPFVKNVEMLLSAYRLLDLQCLLCDKTFNYLRKLISHMNVAHPNNSFECSECKKKFNKKRDMDSHIRLHHKEYHSCTKCDETFPTNSALQIHRANAHSSTCNICFQVFASDSKRLAHQKSDHDSNQSQCGFCNKVLTTKQAFIRHAANCEHKPQEEIVIIDDEDKKMSVKDIRKSLACIFNMTTALPFKFFMNRLRCFYCTKDFTSCEGLKEHTSIEHPHCDITFKSMRLRNRYDGVQVKVDTSSLSCRLCQVTLQDLNDLIDHLSKEHKVKCDFSVETYLQPFKLIKDKYPCPICGEVYRYFGVLLKHVSASHSGNKHICMYCGKAFRTDPNLRAHISRRHKIAENHKCGNCDLVFGTNGALRNHQGSVHDGLPGPYEGCTSERRRKNLKILFNNTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNNIEIKIDVSEIGCDICNEPFSRFEEIIDHLISKHNMEYNKNIDIPFQEYRLVDFRCLYCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLTLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCNYCSKEFHTSLGLRQHVSKCKVKIISQVEPPHTSFLNDSNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRHHTSLEHPVCDLKSKCMKKCKGERIAVKIDISTLACKICCLPMPNLEDLINHLINEHKANYDTSISGCLEPFRVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLSSHMEMHKKYGHVQIQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00851011;
90% Identity: iTF_00173442;
80% Identity: -