Basic Information

Insect: Agriphila straminella
Gene Symbol: -
Assembly: GCA_950108535.1
Location: OX467327.1:2964068-2966422[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0027 5.2 8.2 1.0 18 43 9 31 7 32 0.94

2 21 5.6 1.1e+04 -2.4 0.2 18 43 37 59 33 60 0.58

3 21 0.00047 0.89 10.6 0.0 18 43 68 90 64 91 0.87

4 21 0.34 6.4e+02 1.5 2.1 17 38 98 116 96 122 0.88

5 21 0.0048 9.1 7.4 3.3 14 44 125 152 112 152 0.86

6 21 0.0001 0.19 12.7 0.2 13 43 155 182 153 183 0.89

7 21 0.00026 0.49 11.4 0.4 17 43 188 211 184 212 0.90

8 21 0.007 13 6.8 0.7 17 40 219 239 213 243 0.78

9 21 6.7 1.3e+04 -2.7 0.0 20 29 287 296 287 304 0.80

10 21 0.0017 3.3 8.8 0.1 13 43 304 331 297 332 0.88

11 21 4.3 8.3e+03 -2.1 0.2 18 29 339 350 337 356 0.78

12 21 0.023 43 5.2 0.1 15 44 365 391 360 391 0.85

13 21 0.29 5.5e+02 1.7 2.4 15 39 410 431 404 436 0.72

14 21 0.0038 7.3 7.7 5.1 5 30 428 458 424 464 0.75

15 21 0.0019 3.6 8.7 2.2 14 43 467 493 454 494 0.80

16 21 0.05 96 4.1 0.8 17 44 499 523 495 523 0.85

17 21 0.37 7e+02 1.3 0.7 18 28 530 540 526 552 0.84

18 21 2.1 3.9e+03 -1.1 0.0 35 43 574 582 566 583 0.87

19 21 2.3e-05 0.043 14.8 1.5 5 43 611 648 609 649 0.82

20 21 1.1 2e+03 -0.1 0.2 12 27 663 678 656 695 0.85

21 21 4.4 8.4e+03 -2.1 0.2 11 27 690 708 680 713 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0027	5.2	8.2	1.0	18	43	9	31	7	32	0.94
2	21	5.6	1.1e+04	-2.4	0.2	18	43	37	59	33	60	0.58
3	21	0.00047	0.89	10.6	0.0	18	43	68	90	64	91	0.87
4	21	0.34	6.4e+02	1.5	2.1	17	38	98	116	96	122	0.88
5	21	0.0048	9.1	7.4	3.3	14	44	125	152	112	152	0.86
6	21	0.0001	0.19	12.7	0.2	13	43	155	182	153	183	0.89
7	21	0.00026	0.49	11.4	0.4	17	43	188	211	184	212	0.90
8	21	0.007	13	6.8	0.7	17	40	219	239	213	243	0.78
9	21	6.7	1.3e+04	-2.7	0.0	20	29	287	296	287	304	0.80
10	21	0.0017	3.3	8.8	0.1	13	43	304	331	297	332	0.88
11	21	4.3	8.3e+03	-2.1	0.2	18	29	339	350	337	356	0.78
12	21	0.023	43	5.2	0.1	15	44	365	391	360	391	0.85
13	21	0.29	5.5e+02	1.7	2.4	15	39	410	431	404	436	0.72
14	21	0.0038	7.3	7.7	5.1	5	30	428	458	424	464	0.75
15	21	0.0019	3.6	8.7	2.2	14	43	467	493	454	494	0.80
16	21	0.05	96	4.1	0.8	17	44	499	523	495	523	0.85
17	21	0.37	7e+02	1.3	0.7	18	28	530	540	526	552	0.84
18	21	2.1	3.9e+03	-1.1	0.0	35	43	574	582	566	583	0.87
19	21	2.3e-05	0.043	14.8	1.5	5	43	611	648	609	649	0.82
20	21	1.1	2e+03	-0.1	0.2	12	27	663	678	656	695	0.85
21	21	4.4	8.4e+03	-2.1	0.2	11	27	690	708	680	713	0.72

Sequence Information

Coding Sequence: ATGTACACAAATCTCCTAGATTTTGTCTGCGACTATTGCAGTCGAACTTTCACTCGGAAATACAACTTACAAACGCACATAGAGAACTGCCATCTCAATTCATCATGCTACTGCGACATTTGCGACCAATCGTTTGGTAGTCCCGCCGGCTTACAACTACATTTATCCAGAGGCCATAACCGGCATGGCCAACCTTTCCCAGAATGTGATATCTGCGGGCGAATATTCACCAGAAAGCAAAATATTACATCCCATATGATCACAGTTCATTTACAAGGTATAGGTCCGGAAATAAAATGTCATACTTGCGATAAAACATTTACTACTGAGAGAAACTTAAAGAGGCATAACAGCCAGTTGCACAATCCTGATGCTGAAAACCTAACATGCGATAGTTGTAATAAAGCATTTAAAGGAAAGCACTCATTAATTGCTCATATGCAAGCTATGCATAATTTAGCAGACAAGGGCATCATCAAATGCCCACTCTGTGATAAAGTCTACACAAACAATAGAAATCTGAAACGCCACATTGAAATGTACCATGGTGAAAAAGGGGAATTCAAGTGTGAAATATGCCCTAAAGTTTACACTTCGAACCAGAGCTTAAGGCGGCATGTTAGAACAAGACATTATTCTAACGATGGAGACACGTGCGTTTGTCAGTATTGTAATAAACATATTGTCGGAAGAGAAAATTTGGATAGTCATGTGTCCTTCTTTCATAAACTCGATGATGATTTGGATAGCGACTCGGCTTCTTTGGATTATCAATGCGAAAGTTGTTCCAAGGGATTTGGCGAAGAGCCTTTGTTGAGACAACATGTCAAAATGGAGCATTCATTTAACACTTTTTATAATTACTGCAGAAAATCGTTGTTGAGACAAGAAGACTTGAGTAAAGCCAGCAAAAGTATGTTTTACAAATGCGAATATTGTGTCAACGCTTTTAGCAGCGTTTATGAATTGAAAGACCACATGAGGGTGAATCATGATAGGGAATATTCTCTCTCTACCTGCAATGTTTGTTTCAATAAGTTTTATAGCAAGAAAACGATGTTTGATCATAAAAAGATTTGCTTGCCTCCGCCTAACGTAAAccgctgtagtcactgcgacaaATTATTCACAGATATATCGAGTTTAGAGTTTCATATACGTATTTTTCATCCCCAAGCTCAAATCGCTGATTCTAATATAAGTTCTACAAACGTTGATGATATTTCAGATAATTATAAATGTTCGCATTGTGACCGAGTATATTATAGTGATAGATCTCTCAAACATCACACAAAACTAAAACACACAACTGATGAAGCTGTAGAATGTGAATATTGCGGTAAGATTTGCAGTAATAAATACTACTTAGCGTCCCACACTAAAATAGTCCACAGTAACGATTCCTGGTCGAAATGCGATTATTGTGACAAGCAATTTAAATCAAAGAGGAATATTCGGAGACACATAGAATATACGCATCTAGGAATGCAGAGATATAAGTGTATTGAGTGTGAAACACTTTTTAAAGAGAAGAGAAGTTTAAGAAAACATGTAAGGACTAAACATCCCAATTCGGCAGCTTTTCCTCAGTGCCACATTTGCCACAAGAGATTCGAGTCTGCCAAGTCCTGCAAGATTCACCTAAAATTGTTACACTCCTTCAATATGAACACCTTTCCTTGTGATCTCTGCTCAGTATCGTTTGGTTCGAATGCGGCATTGTCCATTCATTTGCAAACGAAGCATTTGGCAAAAGATGAAATTTACAAATGCGAAGAATGCAACTTAGTATTTAAAGGGCAAGAAAAATTTGAGCAGCACAATGATCTATGCCATGTTAATTTGGTCCCGAATATAAAGCAAAAGGTTTTGCCTCGATGTATTATATGTATGAAAGATTTTAGCACACGAAAGACATTAAAAAGACATATAAAGAAATTCCACGATGATTTTGATGTTGATGAGCTGGCTACTTTTGGCTCGAGGCGTCGTAACTTTAATGTGGAATGCGAAGATTGTATTAAGAACTTTAGTGACGCATTTCACTTCAATATTTATCAGAAACTTAAGCATCTTAGAGACTCGGTGATCTTCAAATGCGAATCGTGTCAAACTTCTTACAATTCGTTAGAGTATTTCATACAACGATATAAATTGACAAATTGTGCTTTTAAAGGGAAAATTATTTTGAGCGACCTTTGCACTGCCGAAATGAGCGATGGTGAATCTTCGTATAATTGCTTCGGATCGTTTCATGAGATGATGGAACCGGAGAGTACTACAAACGACGTTCAAGTAAAAATTGAGCCGTTAGAAGAGATGGAACACGTAAAGACTGAACCGTTGACGCCTTAG
Protein Sequence: MYTNLLDFVCDYCSRTFTRKYNLQTHIENCHLNSSCYCDICDQSFGSPAGLQLHLSRGHNRHGQPFPECDICGRIFTRKQNITSHMITVHLQGIGPEIKCHTCDKTFTTERNLKRHNSQLHNPDAENLTCDSCNKAFKGKHSLIAHMQAMHNLADKGIIKCPLCDKVYTNNRNLKRHIEMYHGEKGEFKCEICPKVYTSNQSLRRHVRTRHYSNDGDTCVCQYCNKHIVGRENLDSHVSFFHKLDDDLDSDSASLDYQCESCSKGFGEEPLLRQHVKMEHSFNTFYNYCRKSLLRQEDLSKASKSMFYKCEYCVNAFSSVYELKDHMRVNHDREYSLSTCNVCFNKFYSKKTMFDHKKICLPPPNVNRCSHCDKLFTDISSLEFHIRIFHPQAQIADSNISSTNVDDISDNYKCSHCDRVYYSDRSLKHHTKLKHTTDEAVECEYCGKICSNKYYLASHTKIVHSNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFGSNAALSIHLQTKHLAKDEIYKCEECNLVFKGQEKFEQHNDLCHVNLVPNIKQKVLPRCIICMKDFSTRKTLKRHIKKFHDDFDVDELATFGSRRRNFNVECEDCIKNFSDAFHFNIYQKLKHLRDSVIFKCESCQTSYNSLEYFIQRYKLTNCAFKGKIILSDLCTAEMSDGESSYNCFGSFHEMMEPESTTNDVQVKIEPLEEMEHVKTEPLTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00035013;
90% Identity: iTF_00035013;
80% Identity: iTF_00035929;