Astr027324.2
Basic Information
- Insect
- Agriphila straminella
- Gene Symbol
- Lztr1
- Assembly
- GCA_950108535.1
- Location
- OX467323.1:9013508-9029534[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-15 8.5e-13 49.4 0.0 4 109 254 389 251 390 0.83 2 4 3.8 1.7e+03 0.2 0.0 78 108 390 420 387 422 0.86 3 4 1.4e-16 6.2e-14 53.1 0.0 9 97 488 576 484 591 0.85 4 4 1.9 8.6e+02 1.1 0.0 77 105 590 618 579 622 0.79
Sequence Information
- Coding Sequence
- ATGTTTGTTTTTGGTGGATACACTGGAGATATTCTTGCAAATTCCAATCTCACAAACAAGAATGATTTGTTTGAATACAAATTTCCAAGTGCCCAGTGGGTACAGTGGAAATTTTCTGGACAagaGCCAGTGCCTAGGTCAGCCCATGGCGCGGCGGTTTACGACGACAAACTGTGGATATTTGCCGGTTACGACGGAAACGCCCGACTAAACGACATGTGGACCATCAATTTGCTGGGTGAAACACACCAATGGGAGCGTGTGGAACAGAAAGGGCAATGCCCGCCGACCTGCTGCAACTTCCCCGTGGCGGTGTCGCGCGGCAAGATGTTCGTGTTCAGCGGACAGAGCGGCGCTAAGATCACTAACGCCCTCTTCCAATTCGACTTTGAGACGCACACTTGGACACGCGTATGTACGGAGCATTTGCTTCGCTGCGCGGGCccggcgccggcgcggcggtACGGGCACGTGATGGTCGCTCACGGGAGGCACTTGTACGTGTTCGGTGGCGCCGCCGACAATACGCTGCCTAGCGACGTACACTGCTACGACTTGGATACGCAAATGTGGTGTATAGTTCACCCGTCGGCGGACTCGCACGTGCCTTCCGGGCGGTTGTTCCACGCAGGCTCAGTGGTGGAAGACGGCATGTTCATATTCGGAGGGACCGTCGACAACAACGTTAGGAGCGGGGAGCTGTTTAGATTCCAACTATCAAACTACCCGCGGTGCACTCTCCACGACGACTTCGGCCGCGTCCTGAAGTCGCAGCAGTTCTGTGACGTCACACTCCTCGTTGGGCCCGACGAGATACCGTTCGTGGCCCACCAGGCGATGTTGGCGGCGCGGTCCAAGTATCTGTTCGAGAAAATTATAGAAGCTCGTGAGGACCTAGCCAAACGCGTACAATCAGGCGAGGAGTCTGCTGATGTGTACGCGTACAAAGACAAACCTTCGCTCACCATCAGGCTACCTGAAGCAACGCCCGAGGCGTTCAGTATGGTGCTCAACTATATCTACACGGATAGGATCGACCCCACTGAGAAAGATGAGGACCCAGCATCTCCGGCGTCCATTCTCTTAGTGATGGAAGTACTAAGATTAGCCTTCCGTCTCCACATACCCCGATTAAGGGGCCTATGCGCGAGGTATCTGCGCGCTAACCTCTGCTATAGCAACGTACTGCCCGCGCTGCACGCTGCGCATTACGCCGACTTGAAGTGTATCAAGGAGTATTGTTTAAAATTCGTGGTGAAAGACTACAACTTCACGCCGATAGTGATGTCCAAGGAGTTCGAGCATATGGAACAGGTGCTGATGGTGGAGGTGATCCGCAGGAGGCAGTCACCTTCTACTAAGgtgccgcccgcgcccgcccacGAGTGCGATGAACATATCATAGGTACGACATTAGAACAAGATATGGCCGTATTCGCGGGCGGCGGGTCGGGCGGGGCGGAGCTTGCTGACGTCACGTTGCGTGTGGGCGGGGCTTTAAGGCCGGCCCACAGATCTATCCTCGCCGCGCGCGCCGCGTACTTCGAAGCTATGTTCCGCTCGTTCTCGCCTCCCGATAACATTGTTAATATTCAGATCTGCGACACGATCCCGTCGGAGGAGGCGTTTGACTCGTTGCTCCGGTACATCTACTACGGAGACACCAACATGCCCACTGAAGACTCGCTGTATCTGTTCCAAGCACCTATATACTATGgTTTCACGAACAACCGGTTGCAAGTATTCTGCAAACACAACCTGCAGTCGAACGTATCGCCGGAGAACGTCCTCGCCATACTGCAGGCGGCGGACCGGATGAGGGCCGCCGATATCAAGGAGTACGCGCTCAAAATGATTGTGCATCACTTCGGAGGGGTTGCCCGTCAAGAAGCAATCAAGAACCTAGCACAACCACTTCTAGTAGACATTATCTGGGCTCTCGCCGAAGAACCCCACTTCGACATACCGCTACCTCAGCAGAAAACGCTCACATCGTCCGCCTCCGCCGATGCCGTTGCGGAAGATCCTGACACCAAACACAAATCCGGCAAATCACATCAGTAA
- Protein Sequence
- MFVFGGYTGDILANSNLTNKNDLFEYKFPSAQWVQWKFSGQEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTINLLGETHQWERVEQKGQCPPTCCNFPVAVSRGKMFVFSGQSGAKITNALFQFDFETHTWTRVCTEHLLRCAGPAPARRYGHVMVAHGRHLYVFGGAADNTLPSDVHCYDLDTQMWCIVHPSADSHVPSGRLFHAGSVVEDGMFIFGGTVDNNVRSGELFRFQLSNYPRCTLHDDFGRVLKSQQFCDVTLLVGPDEIPFVAHQAMLAARSKYLFEKIIEAREDLAKRVQSGEESADVYAYKDKPSLTIRLPEATPEAFSMVLNYIYTDRIDPTEKDEDPASPASILLVMEVLRLAFRLHIPRLRGLCARYLRANLCYSNVLPALHAAHYADLKCIKEYCLKFVVKDYNFTPIVMSKEFEHMEQVLMVEVIRRRQSPSTKVPPAPAHECDEHIIGTTLEQDMAVFAGGGSGGAELADVTLRVGGALRPAHRSILAARAAYFEAMFRSFSPPDNIVNIQICDTIPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVSPENVLAILQAADRMRAADIKEYALKMIVHHFGGVARQEAIKNLAQPLLVDIIWALAEEPHFDIPLPQQKTLTSSASADAVAEDPDTKHKSGKSHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752177;
- 90% Identity
- iTF_00284659;
- 80% Identity
- -