Acya003172.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- bab1
- Assembly
- GCA_947389935.1
- Location
- OX376711.1:21755895-21758481[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-17 3.8e-14 53.6 0.0 1 43 28 71 28 73 0.95 2 2 9.5 6.6e+03 -1.6 1.3 6 15 157 166 155 170 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAATACGAATCAGAGTTTGGTGCACAATTTACGATTCAGAGAACGAGGTCCGTTGAAATCGTGGCGACCGGAAACGATGGCCGAAGCCATTTTTTCCGTTCTCAAAGAAGGACTTTCCCTGTCACAGGCTGCCAGAAAATACGACATACCCTATCCGACATTCGTTCTATATGCCAACCGAGTACATAACATGTTAGGACCATCTGCTGACGGAGGATCAGATTTGAGGCCAAAGGGTAGGGGAAGACCGCAGCGCATTCTTCTCGGTGTTTGGCCCGACGAACACATAAAAGGGGTCATTAGGGCTGTTGTCTTTCGTGATTCCCATCACATCAAAGAAGATCCAATTGGATATCCACGAATTCACGACGGGGTGGGAATACCGGCCAGTTACCCTaacaatacatgcaacaacggttccgatcccacggtgtcaccgggtgctgcggccgcggcagccgttgcagcggtcgcccaaggtctccgacaacaaatgtgcaacatgatggcagccgcacaacaacaacaacagcagcaacaacaacagcagcagcaacaacagcaacagcaacaatcgcagcaacaacaacaacagcaacagaactgcgttcacgacagtctcgttaactcattgagtttggcggcccattgtacggcatctccacttcccatgtcgacaacgggcctttcgagcaacGGCGCAACGCCCACATTGAGCCTAGGCGGTCATCGAATGACGAGTCCGGCCAGTGTACAAGACTTACGAATAAGTCCTACAGGATCAGCAATGGAGAGTCCCTTGTCGTCACCGCTGGGACTTACCATATCGAACGCAATGGTGCCACCTCCCCATCAACAACAACAGCAGCAGCCGTTGACTCCGACTGCGATGGGTCTGACGGCGGGGGGTAACGACGTAACCGGAATTGGGGTTTCGGGGATGACGTACAAGCCGTCCGCGAGACCATTCGCCTCGCCGCGGCCCGAAACGCTCTTCCAGGAAGACATAGACGAGTTAGTGAAGCCGATGCACGCCGCAACGACCACCTCGCCCCATCATCTTCATCACCACCTTCCCCATCATCACCTGCCCAAAGACTCGATGACCGCGACGACGACGTCCATTAAAATTGAACCGTTGACAGAGTGCCGGGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIKGVIRAVVFRDSHHIKEDPIGYPRIHDGVGIPASYPNNTCNNGSDPTVSPGAAAAAAVAAVAQGLRQQMCNMMAAAQQQQQQQQQQQQQQQQQQQSQQQQQQQQNCVHDSLVNSLSLAAHCTASPLPMSTTGLSSNGATPTLSLGGHRMTSPASVQDLRISPTGSAMESPLSSPLGLTISNAMVPPPHQQQQQQPLTPTAMGLTAGGNDVTGIGVSGMTYKPSARPFASPRPETLFQEDIDELVKPMHAATTTSPHHLHHHLPHHHLPKDSMTATTTSIKIEPLTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00030117; iTF_00031715;
- 90% Identity
- iTF_00030117;
- 80% Identity
- -