Abig000730.1
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- PAXBP1_1
- Assembly
- GCA_963921985.1
- Location
- OY998117.1:14003284-14006290[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.43 4.6e+03 -2.8 0.2 58 94 72 115 62 124 0.63 2 2 1.3e-31 1.4e-27 97.2 0.3 3 272 510 717 508 719 0.94
Sequence Information
- Coding Sequence
- ATGTCTCTTTTCCGAAAACCAAAGAAACATATACAACGGCGAGTGTTCACAGAACATGACGAAGAAGATGAAGATGTTATGGAAGTCGAAATTCCTGCCGAAAAAGATACTaagaaaaaagacaaaaacaaagcgtcaaataaaaaaaaacaaccccTGTTAAGTTTTGAAACAGAAGAAGAAGGAGAAGTTTTTCAAGTGAAGAAATCATCTCATAGcagaaaaataatgaaattatttgaGAAAGAAAAGCACAAAAAAAAGGATAAGGCAGAAAAGGAAGAAGTTAAACAGAAAGAACTATTTACAGAAATTATTACAGACGATCTTATAATGAAAGTAAATTCAAGTCACAAAATTCATTCAATATTGCCAGaaccaccaccaccacctaTATTAAGTGGCAGAGATGCTCTTTGTGCAGGGAAAGATGATttatcttcagaagaagaagaaaGTAATTCTGCACATAAATTTTCCAAAcctgataatttcaaaaaagtgtTAGAATCTGGGGCAATTCCTGATGCTGCAATGATTCATGCAGCTCGAAAAAGAAGACAAAGGGCAAGAGAACTAGGTGGTGACTATGTTCCAATAGAAGATGATGAAGAGAAAGAGGATACAGGAAGATTGGTACGTGATGATGAACATGATGCTAGCGAAGATGAAGAAAGAATAGACATGGATATTAACCCATTAAGAAGAGATCAAGATAGGCGAAGGGAACAATTTTTAGCTGCTCAAGAATCAGAAGATGAAGCAGATCAAGAAATTGATGAATGGGAAAATCAACAGATAAGGAAAGGAGTTACAGGAGCTCCTGTGGCTGTGATGTCACAAGAATATATATATGATAACTATACCACAACAGTACAACCTGCACCCCCAATGATGTCTTTTACATTTGACTCAAAAGTTCAAGTCACTCCAGAAGCTATAGTTACCAAACTTCGAAGTCACTATCAAACATTGAGTAATTCCAAGGATGCACATTTAGGAAAACTTCAAAAAGTTACGAACAGGCTTATTGAAACAAACGAAGAACTTGAAGAACAAAAGAAACGCGCACCAATAGCTGCAgaacgatttcgattttatcaAGAATTGAGAGGCTATGTGACTGATCTTGTAGAATGTTTTGATGAAAAGGTGGCATTAATTACAGATTTAGAACAGAGATCAATCGATCTAATGGCTCGCAAAGCAATTTGGTTGATAGAACGCCGAAGACAGGATGTACGAGATCAGGCAGAAGAAGCAACTCTTGCTTGTAAACCTAATTTGGTTCGTAAAAATGCCGAAGATGAGGAAAAGACACGAAGGGCAGCTGAGAGAGAAGGTCGTCGTACACGAAGAAGAAGAGCTCGTGAACAAGGAGGGCAACAGAAACATGTAGAAGGAATGTCAAGTGATGATGAAATTTCGCAACAAGACATGCTTGGTTTTGATAAAGATAGAGAACAAATTGAACTTGAAATTCAAGCCGTATTAGAAGATGTAATGGATGATTTTTCGTCAATTgcgaatattttaattaaatttgaacaaTGGAAAGAAACTGATTTAACTACTTATAATGAAGCCTATGGTACACTTTGTTTGCCTCGGATAGTTACTCCCCTAATTCGTTTAGATCTACTATTTTGGGACCCTTTGACTGAATCAATTGAATTAGAGAAACTAGACTGGTACCGTACTTTGGCCTTATATGGCTTACATGACAATGAGACAGAAAACGATCTTAACAAAGACTCTGACGTTAGTTTGTTACCGAAAATAATTGACAAAGTGGTTGTGCCGAAACTGACGCAACTTGTAGATAGGTGTTGGGACCCTCTTTCTAGTTCACAAACTTTAAGATTAGTAGGAACAATAAGTAGATACATACGACGTTTTCCAACGTTAGGACCTGCGAGTAAATCATTACAAAACTTGTTTAGTGCTATTTTACACAAATTGAAAGAAGCCTTAGAACATGACGTCTTTATTCCGATTGTTCCGAAATTTGCCGAAACGAAGACGCCATTCTTTCAAAGACAGTTCGCGAGCGGTCTCAAATTACTTAGAAATATTACTAGCTGGCAAGGAATTTTAAATGACAATACTTTGAAGGACTTGGCTTTAAATTCTCTTTTAAATCGCTATCTGCTGAGCGCTATAAAAATTTGTCAACTTACTGATGCAGTGAATAAAATGGGATTGATCAGTCACATTCTTCCTCGAATATGGTTACAAAATAACACTAGTCATTTGGAAATGTTCAGCATGTGCGTTACTAACTTGGGACAGCAGCTTGATAAAAACAATCCATTACATTTAGAATCAATAGAAACTCTTTCGAATATAATTAAGTCTTTGAGAAATTAA
- Protein Sequence
- MSLFRKPKKHIQRRVFTEHDEEDEDVMEVEIPAEKDTKKKDKNKASNKKKQPLLSFETEEEGEVFQVKKSSHSRKIMKLFEKEKHKKKDKAEKEEVKQKELFTEIITDDLIMKVNSSHKIHSILPEPPPPPILSGRDALCAGKDDLSSEEEESNSAHKFSKPDNFKKVLESGAIPDAAMIHAARKRRQRARELGGDYVPIEDDEEKEDTGRLVRDDEHDASEDEERIDMDINPLRRDQDRRREQFLAAQESEDEADQEIDEWENQQIRKGVTGAPVAVMSQEYIYDNYTTTVQPAPPMMSFTFDSKVQVTPEAIVTKLRSHYQTLSNSKDAHLGKLQKVTNRLIETNEELEEQKKRAPIAAERFRFYQELRGYVTDLVECFDEKVALITDLEQRSIDLMARKAIWLIERRRQDVRDQAEEATLACKPNLVRKNAEDEEKTRRAAEREGRRTRRRRAREQGGQQKHVEGMSSDDEISQQDMLGFDKDREQIELEIQAVLEDVMDDFSSIANILIKFEQWKETDLTTYNEAYGTLCLPRIVTPLIRLDLLFWDPLTESIELEKLDWYRTLALYGLHDNETENDLNKDSDVSLLPKIIDKVVVPKLTQLVDRCWDPLSSSQTLRLVGTISRYIRRFPTLGPASKSLQNLFSAILHKLKEALEHDVFIPIVPKFAETKTPFFQRQFASGLKLLRNITSWQGILNDNTLKDLALNSLLNRYLLSAIKICQLTDAVNKMGLISHILPRIWLQNNTSHLEMFSMCVTNLGQQLDKNNPLHLESIETLSNIIKSLRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031947; iTF_00031047;
- 90% Identity
- iTF_00031947; iTF_00031047;
- 80% Identity
- -