Aful027191.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947534325.1
- Location
- OX384029.1:53125914-53132864[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.19 9.9e+03 -3.0 0.0 2 10 60 68 26 81 0.71 2 3 9e-114 4.6e-109 365.8 33.2 1 300 98 406 98 406 0.93 3 3 0.0077 3.9e+02 1.6 4.2 191 238 434 480 407 481 0.65
Sequence Information
- Coding Sequence
- ATGCATGAACAAGATATGGGTGGTGTTACTAGTGATCAGTGCAAGCCGAAAGATCCAGAAAATGTTCAAATCGAAGGAGTAACAGAAGATGAGACTCAAGATTTTGATCTGCAACAAAATTTGAACGATAGTGGGCACCAAGATGGTGATTCCTCTGATGATAGTGTTGAAGTTGATGAAGCACGTCTTACTAAAAGAAGACGCACGCTGAGTAAAGTTAACCTGGAAGACGATACCGAAGAAGATGATAACGAGTGTATTAATTATTTTTTAGATAAATGCACAGATCAAGCTGAAGCGAGGCTAGCAGCCCGGCGCCAAGCCCGAGCCGAGGCTCGCGAGATCCGTATGCGGGAGCTGGAGCGTCAGCAGCGGGAGCAAGAAGAAAATGCTGACCGAGCGTACGACATGCTAGCGGAGCCAGTAACCAGAGGCACCAGGTCTGCTTCGACGACGCCGCACAGAGTCGCAGCCACGGGGATCACCAACAGCTCGTACCTCTCCAGCCGGAGGAGCTCGGAGGACTCGCTCGAAGATGGCGGAAGCCTGCGCGATGTCCGGCACGAGCTGAAGGAGCTGGAAGACAAATTCCGCAAAGCAATGATAGCAAACGCTCAATTAGATAACGACAAAGCCGCACAAACCTACCAACTAGAACAACTTAAAGATCGAATAGAAGAACTCGAAGAAGAGTACACCCAATTAAAACGAGAACATCGAGAGACATGCCGGGAACATGATCAACTGAAGAGGGTGTCGGTTAGATTAAAAGAAGAACTTGCTGCATTTAAAACTGAACTTGAAGAAAGAGATCGACTAATAGCGGAGAAGGGATTGGTTATAGTTGGAGAAGCAATTGCCGAGGGAGATGAGAATGATGCTGATGGTACACCCCGTACTCCAAAGAAAGCTTTAGTTAGTATAGAAAATGCCGAGATGTTGGAAAATGCCGGGGAAGGAAGCTTAGATGTACGGTTAAAACGTTTCGCAGAAGAAAAGCGAGATCTTATGGATCAGTTAAGTCACCTTAGATTAGAATTAGAAGAAGAAAGAAGCAGAAGAAAACGTAGAACAAGTACTATGAATAATGCTTCTTTACAAAATGGGCCTAGTTTGGAAAATGACACGTTAGATGTTATAGATGTTCAAAGAGAAGCAAATAAGCAGTTAGCAGACTACAAATTCCGATTGCAAAAGTCGGACCAAGACATTGCAACGTTGCAGGCAACGGTAGCAAGGCTGGAAAGTCAAGTAATTCGCTACAAATCTGCTGCAGAGGCTTCAGAAAAAGCCGAAGATGAGTTGAAGGTTGAAAAAAGAAAACTTCAAAGAGAGGCGCGAGAATCCCAAAGCAGAGTAGAAGAATTAGAAACAGCAAATACACATCTTCAACGAAGACTTGAGAAACTAAAGAATGCAAAATCTGCGTTACTTAAAGAACTCTGA
- Protein Sequence
- MHEQDMGGVTSDQCKPKDPENVQIEGVTEDETQDFDLQQNLNDSGHQDGDSSDDSVEVDEARLTKRRRTLSKVNLEDDTEEDDNECINYFLDKCTDQAEARLAARRQARAEAREIRMRELERQQREQEENADRAYDMLAEPVTRGTRSASTTPHRVAATGITNSSYLSSRRSSEDSLEDGGSLRDVRHELKELEDKFRKAMIANAQLDNDKAAQTYQLEQLKDRIEELEEEYTQLKREHRETCREHDQLKRVSVRLKEELAAFKTELEERDRLIAEKGLVIVGEAIAEGDENDADGTPRTPKKALVSIENAEMLENAGEGSLDVRLKRFAEEKRDLMDQLSHLRLELEEERSRRKRRTSTMNNASLQNGPSLENDTLDVIDVQREANKQLADYKFRLQKSDQDIATLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREARESQSRVEELETANTHLQRRLEKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01225682;
- 90% Identity
- -
- 80% Identity
- -