Amic019131.1
Basic Information
- Insect
- Agara michaeli
- Gene Symbol
- retn
- Assembly
- GCA_018245675.1
- Location
- DWDX01022447.1:1-3854[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-20 1.6e-16 61.1 0.0 17 89 7 77 2 77 0.94 2 2 0.96 3.4e+03 -0.9 0.0 10 38 176 214 165 217 0.52
Sequence Information
- Coding Sequence
- TACTTTCTTCTTGTTCCAGGAACACCAATAAATCGGCTGCCGATAATGGCCAAGTCAGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCCCGCGGCGGCCTCGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATTATCAAAGGACTCCGTCTGCCTTCCTCGATCACGTCTGCCGCATTCACTCTGCGTACACAATACATGAAGTACTTGTATGATTACGAGTGTGAAAAGAAGAACCTGTCAACTCGGAGCGAGTTGGATGCTGCTATAGAGGGCAACAAGCGCGAGGGAAGGCGCGCCTCCGGCCAGTATGACGCGCAAGCCGCGCTGGCTATGCCGCCTCTGAACCGCGTGCCCGCGTCGCTGGCGTCCCTGTCGCACATGCAGCCGCTGTCCCTGTCGCTGGGCGGCGTGGGCGTGCCGCGCCTGCCGCCGCTGccgccgcacgcgccgcacgTCACCCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATCCAGCAGCAGCGCGAGCTGATGAGGAACGGTTCAGAATCCCCACCGAGCGCCCCGATGGTGTCGCCGCGTGACGCCGCGCTGTCCGCCATCGACGTGTCGCGCCTCACGCTGTGGTCGctgtacaacaacaacaacaacagtcCGCAGCCGGACCTCGAGCCGCAACGCGAGGCGCTGAACCTGAGCGAGAGCCCCAACTCGAGCGCGAGCGGCGGCAAGCGCGAGGCGTGccgctcgccgccgccgccggccaAGCGGCGCA
- Protein Sequence
- YFLLVPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLASLSHMQPLSLSLGGVGVPRLPPLPPHAPHVTQHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSASGGKREACRSPPPPAKRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00710818; iTF_01152829;
- 90% Identity
- iTF_01152829;
- 80% Identity
- -