Pahi020123.1
Basic Information
- Insect
- Parelbella ahira
- Gene Symbol
- retn
- Assembly
- GCA_018244795.1
- Location
- DWME01022625.1:1-4994[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-19 8.2e-16 58.8 0.0 18 89 1 70 1 70 0.94 2 2 1.2 3e+03 -0.7 0.0 10 38 171 209 160 212 0.52
Sequence Information
- Coding Sequence
- ACACCAATAAACCGACTGCCGATAATGGCCAAGTCAGTGCTGGACCTGTACGAGCTGTACAATCTGGTGATCGCTCGCGGCGGCCTCGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGCCTGCCTTCGTCTATCACGTCTGCCGCCTTCACTCTTCGTACACAATACATGAAGTATTTGTATGACTACGAGTGCGAAAAGAAAAACCTGTCGACCCGGAGCGAGCTGGACGCGGCTATAGAGGGCAACAAGAGGGAAGGGCGCCGCGCGTCTGGGCAGTACGACGCGCAAGCCGCGCTGGCCATGccgCCTCTGAACCGCGGAGTGCCGGCATCTCTCGCGTCTCTCTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGCGGCGTGGGCGTGCCGCGCctgccgccgctgccgccgcacgcgccgcacgtcACGCAGCATGACATCGAGTACCGCGTGCGGGAGTACATGAAGATGATCCAGCAGCAACGCGAGCTGATGAGGAATGGTTCAGAATCTCCCCCGAGTGCGCCGATGGTGTCCCCGCGCGACGCCGCGCTCTCCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCtctacaacaacaacaacaacagcccGCAGCCGGACCTCGAGCCGCAACGAATATTAACGGAGCAACAGCTCATCGCTAACAGTAACCGTTTGTGGACAGGGAGGCGCTGA
- Protein Sequence
- TPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLASLSQHMQPLSLSLGGVGVPRLPPLPPHAPHVTQHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQRILTEQQLIANSNRLWTGRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025062;
- 90% Identity
- iTF_00025062;
- 80% Identity
- -