Eman003378.1
Basic Information
- Insect
- Eurema mandarina
- Gene Symbol
- retn
- Assembly
- GCA_018238005.1
- Location
- DWAJ01001269.1:1-6929[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-20 2.2e-16 60.6 0.0 17 89 43 113 41 113 0.95 2 2 3.6 9.1e+03 -2.3 0.0 25 38 228 241 194 242 0.54
Sequence Information
- Coding Sequence
- ATGCAACACTGTTACCATTGCGGTGCTTATGTGGCTGTAGTCTTCCCGTTTGCACTTAATCATCCCCCGGTTATCCGGGCGGGGGAGGGTGCCGGGGGCGAGGGGCGAGGCGGGAGCGGAGGAGGGGGAACACCAATAAACCGGCTGCCAATAATGGCCAAGTCCGTGCTGGACCTGTACGAGCTATACAACCTGGTGATAGCGCGAGGCGGCCTCGTGGAGGTCATCAACAAGAAACTCTGGCAGGAGATCATCAAAGGGCTGCGGCTCCCGTCTTCTATCACCTCGGCTGCGTTCACTTTACGGACACAATATATGAAGTACTTATATGACTACGAGTGCGAGAAGAAGAACTTATCAACGAGGAGTGAACTGGACGCAGCTATAGAGGGCAACAAGCGGGAGGGCCGCCGCGCCTCCGGACAGTATGACGCTCAGGCCGCCTTGTCTATGCCGCAGCTGAACCGCGGCGTGGCGTCGCTGTCGCTGCCCCACATGCCGGCGCTGTCGCTGCCGGTGGGCGTGGGCGTGCCGCGCCTGCCGCCGCCGCACATCTCGCAGCACGACATCGAATACCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAGCGCGATATAATGCGTAACGGCTCGGAGTCGCCGCCGAGCGCGCTGGTGGCGGGGCGCGACGCGCTTTCCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCtctacaacaacaacaacgcGCCGCACCCGGACATCGAGCCGCAACGGGAAGCGCTCAACTTGAGCGATAGCCCGAGCGCCGCGAACGGCATCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGCCGCA
- Protein Sequence
- MQHCYHCGAYVAVVFPFALNHPPVIRAGEGAGGEGRGGSGGGGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPQLNRGVASLSLPHMPALSLPVGVGVPRLPPPHISQHDIEYRVREYMKMIQQQRDIMRNGSESPPSALVAGRDALSAIDVSRLTLWSLYNNNNAPHPDIEPQREALNLSDSPSAANGIKREACRSPPPPAKRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025062;
- 90% Identity
- -
- 80% Identity
- -