Avir013820.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agapostemon virescens
Gene Symbol
-
Assembly
GCA_028453745.1
Location
CM052083.1:10434143-10436938[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.1e-15 1.1e-11 46.0 0.7 1 87 5 87 5 87 0.88
2 4 3.8 1.1e+04 -2.0 3.4 19 62 431 477 407 499 0.57
3 4 5.2 1.4e+04 -2.4 2.8 40 62 481 511 470 539 0.66
4 4 6.2 1.7e+04 -2.6 3.7 6 62 584 631 577 646 0.55

Sequence Information

Coding Sequence
ATGAAAATAGTTTGTGCTGCAAAGAATTGTAAATACTCTTCGGAAACTGAAGACTCGACACATGTCATTTTTATTAATTTCCCAAACGATGAAATGTCAAAAATATGGGCACACCATTGTGACAGAACAGACCTTTTAACTAAGTCTAATGAAGAATTACATTTAAATTACTATATATGTTCTCATCACATTGAAGACCGTTACTATATAAACAAAGCCGATCCCATTATGATAGATCAACATGCTGTTCCTACATTATTCGGATCAGACAATATAGCAAAACGAAATGTACAAAATTTATTTGTTAGAAATGAACAAATTGAAGTATCAGATAATGTTGAATTGACAGAGATAGATGTTGAGATGGGTCCGTATCAAGATATTAACACAAGACTTAGCAATTTATGTAGAATATGTGGAGAACCGTGTTTGGATGGTATAGAAATTTTCACAGAGAAAGGCATACAGTTAAAAGTAAGAGAAAAAATAAGTTTACACTTGCCAATAAATCCTACTTTGGAAGATTTAATGCCACAAAAAATATGTACCAATTGTTATGATAATTTAGAAACTGCTCATTTATTAGTGACAACATCTTTAAAAACTGATATGAGATTGAGAAAGTTCCTTAATATCAAGGGAGGATTTAGTTATTATGACAATAAATACAATGAAATAGTAAGGATGTGTTCGGCAGAAGTAATTCATGAGATGTACATGAATAAAACAATTCATACAATGTCTATAGAATTATCGGCTACCGAAGGAGGGGAAATACTAATGAATCAGAATGTGCCTACAAAATTGAATTATCCAGAGGATATTGTCTCAAAGAAAGCTAGTTCTTCGAATAACATAAGAAAAGAAATGCAATCTGAATTAAGTAGACTTATCGAATCGTACAGTGATGCACAAAACGATATAGCAAATGGTATTAACGAGATTACATCATTCCATACAAAAGATTCATTTAAAACACAAACAATATTTGAGAATCACAAGATGTTGTGCGATGAAGGTGAAATAATAATACAGAAAGAAATATCTAGTAGTACAAACACTAATGAATCGTTAGAACCTCCAAGTTGTAAGTCTTTTCAAGGAGAAAATTATGAAGTCACAAATAAAGTGGACTCAACAAGAGTTGACTGTAATGTCCATAACAATTCTCACAACATAAATACTGTTGCAATGGTGGAAACAAATAAAAAATGTGGTCACTGTCAGTCCATTTACAGTACAAAAAAAGAGTTACTAAATCACATTACAAAACGTCACAAAAGTCAGCTATTATTTGCATGCATTATCTGCGATAAAAATTATGAAAAATGGTCGAGCTTAGATGTTCACGAAGCTACGCACAGAACAGACAAACCCTATCTGTGCGATTTATGTGGAAAAAGTTTTAAGCACTCGAATAATCTAAGAGGACATAAGAGAACTCATTTAGATGACTCGAAAAAGAAACGGCATTCTTGCGAAATTTGTGGAAACTCGTTTAGATCTAGATTTCACTTGGGAGAACACATGAATCAGCACAACGACCATAAACCATACTTTTGCGAAAAGTGTGGCAAAGCTTTTTACAAGAGGATACAATTAAGACAACACAGACTATCCCATGGTTTGAGCAAACATTGTTGTCCAATATGTGGAGCGTCTTTCAATCGTAAAGGGAATATGAATACTCACCTTAAAAGACATAGTAACGATAGTGGGATGTACACCTGTAGCATTTGCGGGTACAAGTGTAAATCGATGAGCGAATTGAAATTACATCGAAAGGAACATACGGAGGAAGATATTATGGAAAGTATTAAAAAACGGTATTCCAATCGAACGGAATGGCAATGCAAAACTTGTAGTCAGACGTTCGCCACGCGAACTGATTTTTCAAACCACGAACGCTTGCATAAAGGAGAAAGAATAAGGGTTGAATGTGATATTTGCGGCAAACAATTGGCTAGTAAAAACTCATTAATTTATCATAAGAAGTCTATGCATTCTAAAGAGAGGCCACACATGTGTCAATATTGCGGGGAATCGTTCGTTTCCAAAGAGGCGCGTCTCATACACGAAAGGATCCACACCGGAGAACGCCCTTACGTTTGCAAAATATGTAAAATGAAGTACAAATGTTCCAGCAATCTTAATCAGCATATGAAAATTCATTCGGACGTTAAACCCCATGTATGTACATATTGCGGTAAAAGTTTCACACGCAAGGGAGCGCTGTCCGTTCACCTAAGAATCCATACAGGTGAAAAACCTTTTTCCTGCGAAACCTGTGGCAGAAGGTTTTCGCAAAAGAACGATATGTTGAAACATACGAAAACGCACCAAGCGAAAGTGTTGCGTTGCGAAAAATGCGACGAAGCTTTCACGAGAAAGAAAGATATTTTAAAACACCTCGCAATGCACAAACAAAGTGACCTTATAGTTTAA
Protein Sequence
MKIVCAAKNCKYSSETEDSTHVIFINFPNDEMSKIWAHHCDRTDLLTKSNEELHLNYYICSHHIEDRYYINKADPIMIDQHAVPTLFGSDNIAKRNVQNLFVRNEQIEVSDNVELTEIDVEMGPYQDINTRLSNLCRICGEPCLDGIEIFTEKGIQLKVREKISLHLPINPTLEDLMPQKICTNCYDNLETAHLLVTTSLKTDMRLRKFLNIKGGFSYYDNKYNEIVRMCSAEVIHEMYMNKTIHTMSIELSATEGGEILMNQNVPTKLNYPEDIVSKKASSSNNIRKEMQSELSRLIESYSDAQNDIANGINEITSFHTKDSFKTQTIFENHKMLCDEGEIIIQKEISSSTNTNESLEPPSCKSFQGENYEVTNKVDSTRVDCNVHNNSHNINTVAMVETNKKCGHCQSIYSTKKELLNHITKRHKSQLLFACIICDKNYEKWSSLDVHEATHRTDKPYLCDLCGKSFKHSNNLRGHKRTHLDDSKKKRHSCEICGNSFRSRFHLGEHMNQHNDHKPYFCEKCGKAFYKRIQLRQHRLSHGLSKHCCPICGASFNRKGNMNTHLKRHSNDSGMYTCSICGYKCKSMSELKLHRKEHTEEDIMESIKKRYSNRTEWQCKTCSQTFATRTDFSNHERLHKGERIRVECDICGKQLASKNSLIYHKKSMHSKERPHMCQYCGESFVSKEARLIHERIHTGERPYVCKICKMKYKCSSNLNQHMKIHSDVKPHVCTYCGKSFTRKGALSVHLRIHTGEKPFSCETCGRRFSQKNDMLKHTKTHQAKVLRCEKCDEAFTRKKDILKHLAMHKQSDLIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00861353;
90% Identity
iTF_00024756;
80% Identity
iTF_00024756;