Basic Information

Insect: Aethes cnicana
Gene Symbol: -
Assembly: GCA_963971205.1
Location: OZ020275.1:5187646-5196557[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.06 4.1 8.7 4.1 1 23 78 101 78 101 0.97

2 19 8.7 5.9e+02 1.9 4.6 1 23 182 204 182 204 0.96

3 19 0.0022 0.15 13.2 1.0 2 23 210 231 209 231 0.97

4 19 2.7 1.8e+02 3.5 1.4 1 23 237 259 237 260 0.94

5 19 0.23 16 6.8 3.4 2 22 503 523 502 523 0.95

6 19 0.67 46 5.4 0.3 2 23 781 802 780 802 0.96

7 19 0.0075 0.51 11.5 2.2 2 23 880 901 879 901 0.97

8 19 0.083 5.7 8.2 0.7 1 23 909 931 909 931 0.97

9 19 0.12 8.3 7.7 3.6 1 23 966 988 966 988 0.95

10 19 9.1e-05 0.0062 17.5 4.2 1 23 996 1018 996 1018 0.99

11 19 0.14 9.3 7.5 1.9 1 23 1102 1124 1102 1124 0.99

12 19 1.5 1e+02 4.3 3.1 1 19 1179 1197 1179 1201 0.92

13 19 0.6 41 5.5 0.1 1 19 1207 1225 1207 1227 0.94

14 19 0.36 25 6.2 0.6 1 23 1296 1318 1296 1318 0.89

15 19 0.01 0.71 11.1 2.4 1 23 1324 1346 1324 1346 0.94

16 19 0.0088 0.6 11.3 2.6 1 23 1436 1458 1436 1458 0.97

17 19 0.00012 0.0079 17.2 1.2 1 23 1464 1486 1464 1486 0.99

18 19 7.2 4.9e+02 2.1 1.4 1 23 1578 1600 1578 1600 0.95

19 19 0.034 2.3 9.4 4.3 1 23 1610 1632 1610 1632 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.06	4.1	8.7	4.1	1	23	78	101	78	101	0.97
2	19	8.7	5.9e+02	1.9	4.6	1	23	182	204	182	204	0.96
3	19	0.0022	0.15	13.2	1.0	2	23	210	231	209	231	0.97
4	19	2.7	1.8e+02	3.5	1.4	1	23	237	259	237	260	0.94
5	19	0.23	16	6.8	3.4	2	22	503	523	502	523	0.95
6	19	0.67	46	5.4	0.3	2	23	781	802	780	802	0.96
7	19	0.0075	0.51	11.5	2.2	2	23	880	901	879	901	0.97
8	19	0.083	5.7	8.2	0.7	1	23	909	931	909	931	0.97
9	19	0.12	8.3	7.7	3.6	1	23	966	988	966	988	0.95
10	19	9.1e-05	0.0062	17.5	4.2	1	23	996	1018	996	1018	0.99
11	19	0.14	9.3	7.5	1.9	1	23	1102	1124	1102	1124	0.99
12	19	1.5	1e+02	4.3	3.1	1	19	1179	1197	1179	1201	0.92
13	19	0.6	41	5.5	0.1	1	19	1207	1225	1207	1227	0.94
14	19	0.36	25	6.2	0.6	1	23	1296	1318	1296	1318	0.89
15	19	0.01	0.71	11.1	2.4	1	23	1324	1346	1324	1346	0.94
16	19	0.0088	0.6	11.3	2.6	1	23	1436	1458	1436	1458	0.97
17	19	0.00012	0.0079	17.2	1.2	1	23	1464	1486	1464	1486	0.99
18	19	7.2	4.9e+02	2.1	1.4	1	23	1578	1600	1578	1600	0.95
19	19	0.034	2.3	9.4	4.3	1	23	1610	1632	1610	1632	0.97

Sequence Information

Coding Sequence: ATGTCCTCGCCGCTCGCTCCCGCCGGCGAGGTCGCGTCCCTGCCCCGGCTCGACGGCCGCGTGTGCGGCGACGTCTCTTCGGAGGCCTCCTCCGACGCCGCCGAAGATTTTGAACTACCACAGTGCAAAATAAGACGAAACTACAATTGTACCAAGTGCACGTTCTATACGCAAAATCCGCGAGTTTATTTAGTGCATTCGAGAGACgttcattttgaaaaaatcaaaatatatgACTGTCCTCATTGTGTTTACGCTTCGAGACACCATCAGAAACTTGTGAGACATATAAAGATGGTGCACGCCGCGCCGTCGCCGGTGGTCAAAGCCGAGACGGAGACTCAAACACTGCCCATCAGCACCCCGGAACCGGTGGAGCAGATGGAAGATCTACTCGAAGAAGTCGAGGATACTGACGAAGTACCGATTGAGATCGAAGACTGTATCGAGGAGTGCTCGGAGCCCGCGGACATGGACGTCGACGTCGAAAGACCCGTCGTCGAAGAAGCGCCCTCGGGGCTACCGAAGAACAAAACGAATTTTTTCTCGTGCACCAAGTGCAACTACGTAACTCACATCCGAGCCAGATTCACCAAGCACGTGAAATACCATTCGATGCCGATGATCAAGTGTACGATGTGCGACTTCCGTACGCCATACAAATGGAACTTGGATCGTCACATGAAGAATCACGGAGGGACGGGTAGTTTCAATTGTTCCATGTGCAACTTCACCGCAGATATCAAGCAGAGTCTGACGGTGCACGAGATGAATCACCACACGCCGCCCGTGGGGCAATCGGTCGCGAGTCGCCGACGCAACCGGGTGGGTGCCAGCGACATGctcgccgccgcgccgccgccgctcgTCGCCAAGGAGGAGGAGGGGAGCGGCGACTCGCGCTCCTCGCACGCATCGGACATGGTCCTCCAAGACGCCGATATAGAAATGGTTAGCTGCAACAGTGACGATATTAGCCTTGAAACAGCTTACAGAAAAGATGGCTCAGAACTGACACAAGAAGGACACAACCAATCATCCCCCACCAGCACATCAGACGAAGGGAAAGCCAATAAACAAAGTAGGAAAATTCCTCGACCAATCCCACAGTTGATTCCTTTAAACTCCTCGACGCCAAATCAAAATAAACCGTTAAATGGGGAGCCTCCTCTCAAAAAGTTCAAAGAAGATCCCTGCTTGGAAACTGCAAATATAAACAATGTTGATAACGTTGATAGTTTACCAGCCGACATTTCTCTTATACCCGTAATTAATGTCACTCCGACTGCAACAAAAGAACCAGTACCTAGAAAGAAAAACGAATCCTTTTTTGATAGACTTAAAGAAAGATTATTGACAGCAACCGGTGAAGAGGGTACTTTGACTTGCAAGAATTGTGGGTTTGAAAGCAAATGTTTATCAGAACATTCTGTACATGAAAAAAATTGTACAGTACCTGCTAACAGAGTTATGTCAAATAACACACATACGAGTCTTGGCTCCACGCGCTGTCAAAACTGTCGGCATAGATGTAAATCAAGTGCCGATTTGTATGTGCATATGCAAACATGCGGTAAACAAGAAAAAGTTTCAAACGAAAACATCAATGATTCTGAAAAGAACAACAGAGAAGCTGCATCATCGACTCAAGAAAGCGATGTAATCAAAGAAATGCCACATCCTATGGAAAATGTCGTATTTGTATGGAATAACATAAGTCATGACACTGCAAAGTTTGAAACTCCATTAGACATCAGCATCAATGATGATTCCACACAGCCAGAATTGGGAAAAAGTTATGATTCGGAAGTTGTCGACGACAATGAAGGCATGAACTTGTCTCCGAGCCAAGCCGCTGGAAAGAAAGTATTTAAGTGCCCTCATTGCACATTTTGGGCGTCAACCGCGTCAAGATTCCACGTTCACATTGTTGGACATTTAAATAAGAAACCGTTTGAATGTTCTCTTTGCAAATATAAATCGAATTGGCGATGGGATATTACCAAACATATAAAACTAAAGTCAGCCCGGGACCCTGAACACAATGATGCAAAAGTGTTAATGACTGATGAAACTGGAAGACGAAATTACAGTAAATACAACAAGTTCTTAGCAATTCCAATTGTGAATGAATATGGTGAGACTGAATTCGACTACATAGACACAAACGCATTAGCCAGCGGCAACATGGACTTCGATGATCCAATTAACGATACGAATGAGAACACCAACGTATCTCTGGAAATACCGCTAAATCTGCTATCGCAGCAGGGTGAGCAAACATTTGAAAATCAAGAAGACAAAAATGATGACTGTAAAAAACCTAAGAAAACAATGTGGAAATGCAAGAAATGTAATTACAAAGATGCATCGAAGGAAGCCTTACTGGAACATGTTCGGGAGCATTCTAAACCAGACGGCAGCCAGGAGGAGGCCAAGCCCGCCGCCAACAAGAAACCAGAAAACACACCGGACCCCGCCGACCTGGCGTATCGATGTGGCCATTGCAACCAATTATCAAACTGGAAACACGTTATACAGAGACATTGCCGCTTGAAGCACGATGGAGTGATAAAAGTTATAACTACGGTGAAACCAAAACCTGATACTTCAATGACATCAAACGATTTTAATGACACTTGCCATAAATGCCCCTTCAAAGCATCAGACAGAAAACAGCTCATAAACCACATGCAGCAACATCAGCCGTCACCGCAGTCGATATTCAAATGTTATTTCTGTCCATACTTCGTGAAAACTGAGCAGGACTTGTTACAACATCTCGCTTTACATGGAATCACTGATCCCGAAGAATATATCGCGAAGGCGATGGGGTGCAAATCTCCACTTCCCGATCCACAAGGAAATTCAGGCCCCTCAGTCCCAACTAAACGGCACAAGTGTACAGAATGCCCGTATGAAACGAATAGTAAATCCCAGTTTATGTATCACGAACAATTTCATCGGCTCCCAgccgacactccatacaaatgtCCGGAGTGCAACTACAGTGTATCAAAGAGGCACTTGCTCCATCAACACATGAGAGTTCATGGAATTATGACCAAGAAATCGGAAATGGAACTGGAACTTGAAGCATCTTCTTCAAATTACAAGGCAGATGGTAGATTAGATATCCCTATAGATCTAAATGAAATACCGTACGTGTGGGTTTCTGCGAAAAACGAATTTCATAAAATGTACAAGTGTCGGTACTGCTCATATGTTAAttctcaaaaatgtaaaatACCAAATCATGAAAAAATTCATTGCGTTGTTtttgaaaacagtgaaataacTATTTACAAATGCTTGGAATGTAAATTTACATGCGATAATGCTGGAAGATTGGCTGAACATTCCAAAACACATGGGGAAATATATGGCCGAATATACTGCCCTGTGGAAACAGACGTTCCCGACGAAGAACAGATTTCCAAGTTACGTAAAGTAATAGAAGCTGAAAAACTCAACAACTCTGAAACACCTAGAGAAGAGTATGTGGCAAAAGAATGTGAAgaagttaaaatattatatttttgtcaCAAATGCCCCGCCAGATTCTTTAATGATAATGACTTAAGAGTTCATGATAAATTCCACGATCTTCTGTTTGCTCATAAGTGTAAAAATTGTGAATTTTCCGTTCCTCAAGAATCCGAATTAGATGTGCATGTTGTATGCCATACCGACGAATACCAGACAAAAACTAAAATGTTGAAATTCATGCACAGATCTCATCCCGCTCACAAAGAACCCAAACTGGAACTTATTCATTGTCCAATGACATCCGATATTAACTGGATAGTTCCGCAACCTACAAAAAATTACGATATTATTGACACCACCAAAAAGGGCAACGAAAACCGCAGTGTACCCAAACAATACTTTTGCAAAGAATGTCCGGCTAAATTCTTTAAAACATCAGCACTTAGTTACCACGCCGGATTACACGGAGGAGAAGGCGACCATAAGTGTAAAAAATGTAGTTACACTGTTAAAAACTTGGGTAATTTGGCGAAACATGAAACATTGCACGAAAACGAAGGTAAAACGACAACATGCGATTACGAATCTGGCGAGGACAATGACTATAAAAACGTTCCACTATCTGGAACAGATCTATTCCAGCGGAAAACTGAAGCTCAAAAAAGGGTTGTTTCCGACAAAAACAAATTAGTGAAACCAAACGATCATTTTCCACCGGTACTCCAAGCTGATCCACAGTTTGGCTACTTGATGCATGGTAATCCAGAATTTATATACCccacatatttaaaaaatggaCGCCAGAAAGAAAAAAGATACAAATGCCACAAGTGTCCATCAGCTTTTGAAAAGAGAGAACAATATAAGATACATTTATCGTTGCATGGATCCAAACAAAGATACAAATGTGAAGTCTGCGATTACTCTGTTAAATATTACGCCAATTATGTCCAGCACATGAGAAAACATCAAATGAACGACGAAGCTCAagcagaaagaaaaaaaatcaatggaGAAACAAATGAAGGTGAAAATGAGACAACCGAAAACAACTCATCgaaagaaaatattaaattggcAATTAAAACAATGCCCAAGGGCCCAACTAGGCCAAAATCTGATTTCCAGCAGTTTTCTGTCAGTGACCAGCAAACACTTAGACTGCTACAGTTAAGGCGTTCTATAAACAATGCAGACAAAGAAAAGAATCCAGAACCATCGCCGGCAAAAGAGCGTAAGCAGCATATGTGTTTGCTGTGTCCGTACACAAATCAGCGTCAAGACGCTTTGGGTAACCACTACAAGAGACACGACGATAACACTAATTCTAATGCTGCACATAAATGCTCTCACTGTGACCTAGTCGTAGTGCAATCACATTTCCTTCGAGAACATTTAAAGGCTCATTTTAACTATCAGAAGCATCTGATTCCTGAATGTTTCTCCGCGAATGAGGGTGTGACATTTGTTATAACGAAAATAGATGACGAAGATAAGTCAGAGGATAAGAACGAACAAGACGTGGACCTCAATGCTGATGAGAAAAAGAAATGTGAAAAAATCAGCGATATCAACATCAAACTTGAAAATCCTGCCTCATCGAACAATGTTACTGATGACGCTGGTGGCAAAAATTgtgaaaataagaataaacttaATACAAATCGCATTCACAAACTTATCgataaaatcattaaaaaagaaGACAAATCCTCAACTGAGATCGTAATCGACTTGGATCAGAAAATTTCTGTAGATTCAAACGATAATAAGATCTTTGTTAAGCTAAAGACGGGAGAGCTTATCGTAGATTAG
Protein Sequence: MSSPLAPAGEVASLPRLDGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRVYLVHSRDVHFEKIKIYDCPHCVYASRHHQKLVRHIKMVHAAPSPVVKAETETQTLPISTPEPVEQMEDLLEEVEDTDEVPIEIEDCIEECSEPADMDVDVERPVVEEAPSGLPKNKTNFFSCTKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGQSVASRRRNRVGASDMLAAAPPPLVAKEEEGSGDSRSSHASDMVLQDADIEMVSCNSDDISLETAYRKDGSELTQEGHNQSSPTSTSDEGKANKQSRKIPRPIPQLIPLNSSTPNQNKPLNGEPPLKKFKEDPCLETANINNVDNVDSLPADISLIPVINVTPTATKEPVPRKKNESFFDRLKERLLTATGEEGTLTCKNCGFESKCLSEHSVHEKNCTVPANRVMSNNTHTSLGSTRCQNCRHRCKSSADLYVHMQTCGKQEKVSNENINDSEKNNREAASSTQESDVIKEMPHPMENVVFVWNNISHDTAKFETPLDISINDDSTQPELGKSYDSEVVDDNEGMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAIPIVNEYGETEFDYIDTNALASGNMDFDDPINDTNENTNVSLEIPLNLLSQQGEQTFENQEDKNDDCKKPKKTMWKCKKCNYKDASKEALLEHVREHSKPDGSQEEAKPAANKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDTSMTSNDFNDTCHKCPFKASDRKQLINHMQQHQPSPQSIFKCYFCPYFVKTEQDLLQHLALHGITDPEEYIAKAMGCKSPLPDPQGNSGPSVPTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHMRVHGIMTKKSEMELELEASSSNYKADGRLDIPIDLNEIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCVVFENSEITIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVETDVPDEEQISKLRKVIEAEKLNNSETPREEYVAKECEEVKILYFCHKCPARFFNDNDLRVHDKFHDLLFAHKCKNCEFSVPQESELDVHVVCHTDEYQTKTKMLKFMHRSHPAHKEPKLELIHCPMTSDINWIVPQPTKNYDIIDTTKKGNENRSVPKQYFCKECPAKFFKTSALSYHAGLHGGEGDHKCKKCSYTVKNLGNLAKHETLHENEGKTTTCDYESGEDNDYKNVPLSGTDLFQRKTEAQKRVVSDKNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAQAERKKINGETNEGENETTENNSSKENIKLAIKTMPKGPTRPKSDFQQFSVSDQQTLRLLQLRRSINNADKEKNPEPSPAKERKQHMCLLCPYTNQRQDALGNHYKRHDDNTNSNAAHKCSHCDLVVVQSHFLREHLKAHFNYQKHLIPECFSANEGVTFVITKIDDEDKSEDKNEQDVDLNADEKKKCEKISDINIKLENPASSNNVTDDAGGKNCENKNKLNTNRIHKLIDKIIKKEDKSSTEIVIDLDQKISVDSNDNKIFVKLKTGELIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00156802; iTF_00155876; iTF_00342777; iTF_01463805; iTF_00462976;
90% Identity: -
80% Identity: -