Dang006425.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829473.1:6389547-6394146[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.14 8.6 7.7 4.1 2 22 195 215 194 215 0.96 2 15 0.45 28 6.1 0.2 2 23 473 494 472 494 0.96 3 15 0.015 0.96 10.7 1.1 2 23 573 594 572 594 0.97 4 15 0.052 3.3 9.0 2.0 1 23 602 624 602 624 0.97 5 15 0.11 6.9 8.0 3.6 1 23 659 681 659 681 0.95 6 15 0.00058 0.036 15.2 5.4 1 23 689 711 689 711 0.99 7 15 0.12 7.8 7.9 1.9 1 23 795 817 795 817 0.99 8 15 3.8 2.4e+02 3.2 2.3 1 19 872 890 872 894 0.91 9 15 1 65 5.0 0.1 2 20 901 919 900 920 0.95 10 15 0.33 21 6.5 0.6 1 23 989 1011 989 1011 0.89 11 15 0.0071 0.44 11.8 2.3 1 23 1017 1039 1017 1039 0.95 12 15 0.008 0.5 11.6 2.6 1 23 1129 1151 1129 1151 0.97 13 15 0.00011 0.0066 17.5 1.2 1 23 1157 1179 1157 1179 0.99 14 15 1.1 68 4.9 1.3 1 23 1272 1294 1272 1294 0.96 15 15 0.012 0.73 11.1 5.6 1 23 1305 1327 1305 1327 0.98
Sequence Information
- Coding Sequence
- ATGGGCCTTCAATACGCCGATATAGAAATGGTTAGCTGCAACAGTGATAATGACACGAGTACGGAAACAGTTACCGCAAAAGATGATTCAGCATTGACGCCAGATCTACATAGTCAACAATCACCTAATAGCACATCAGAAGATGGGAAGTCACATAAGCAGAgcagaaaaattaaaaagccaATACCACAACTAATACCCTTGAATTCATCGACACCTAATCAAAACAAATCATCTTCTGGGGAGCCACCGCTAAAAAAGCCCAAAAGAGACTCATGTCTAGATTCTGTACCTATAAACACCGACAACGCTGACATTTTACCAGTTGAAATCTCTCTTACACCCGTAAACAATACTCCAACTACAACCAAAGAACCAGTTGTGAGAAAGAAAAACGAATCTTTCTTCGATAGACTAAAAGAAAGGTTGTTGACGGCCACCGGGGAAGAGGGAACATTGACTTGCAAAAACTGTGGTTTTGAAAGTAAATGTTTATCAGAACATTCAGTACATGAGAAAAATTGTACAGTACCTACTAATAGAGTTTTAGCAAATAACACTCATACGAGCCTTGGTTCTACGCGTTGTCAAAATTGTAGACATAGATGTAAATCAAGTGCCGATTTATTTGTCCATATGAAAACTTGTAATAAACAAGAGAAAGCAGTAAACGAAAGTACAACagataataagaataaaaatgaaGCTACTGTATCAACCCATCAATCTGATGTACTCAAAGAGGAACCGCATCCAATGGAGAATGTTGTATTCGTTTGGAATAATATCAGTCACGATACGGCTAAGTTTGAAACACCCTTAGATATAAGCATTAATGATGATTCTACTCAACCTGAATTGAGCAAAAATTACGATTCTGAAGTTGTTGATGACAACGAAGGTATGAACTTATCACCGAGCCAAGCTGCGGGGAAAAAAGTCTTTAAGTGCCCCCATTGCACTTTCTGGGCTTCAACAGCATCAAGATTTCACGTTCACATTGTCGGACATTTAAACAAGAAACCGTTCGAATGTTCGCTCTGCAAATATAAGTCTAATTGGCGATGGGATATCACTAAACATATTAAACTAAAGTCTGCGAGGGATCCTGAACATAATGAAGCAAAGGTGTTAATGACTGATGAAACTGGAAGGAGAAATTACAGCAAATACAACAAATTTTTAGCCGTGCCAGTTGTCAACGAATATGGAGAAACTGACTTCGACTACATCGATCCAAATGCACTGGCAAACGGGAACATGGATTTCGATGAACCATTCAACGACACGGGTGAAAATATCAACGTGTCCCTTGAAATGCAACCGCTTAACCTGCAAACCCAACACGATGAAAATAGATTTGGGATAATCGATGACAAGAATGAAGACTCCAAAAAACCTAAGAAAACTATGTGGAAATGCAAAAAATGCAATTACAGAGATCCGTCGAAGGAAGCGTTACTTGTGCATGTTCGAGAGCATTCCAAGCCTGAAGGCAGCCAGGAAGAGAACAAGCCTTTTAGTTTGAACAAGAAACCTGAGAACACACCTGACCCAGCTGATCTGGCGTACCGATGTGGACATTGCAACCAACTGTCAAATTGGAAGCACGTCATACAGAGGCACTGCCGCTTGAAACATGACGGGGTGATAAAAGTTATAACTACAGTGAAACCAAAACCAGACTCTGCATTATCTTTGAACGAGGTTAATGACACTTGCACCAAGTGTCCATTCAAAGCAACAGATAGAAAACAGCTGCTGAGTCACATGCAGCAACACCAACCATCTCCTCAGTCGATATTCAAATGTTACTTTTGTCCGTATTTCGTCAAAACTGAGCACGACTTAATGCAGCACCTCGCGTTACATGGTATAACTGATCCAGAAGAGTACATTGCGAAAGCAATGGGGTGTAAGTCGCCACTTTTGGAACCACAAGGTCCATCAGGCACCTCAAACTCTACCAAACGTCATAAATGTACGGAATGTCCATATGAAACTAACAGCAAATCCCAATTTATGTACCATGAGCAATTTCATCGACTGCCTGCTGACACCCCGTATAAATGCCAGGAGTGCAACTACAGCGTATCAAAGAGACACTTGCTGCACCAGCATATGCGGGTTCACGGAATAATTACAAAGAAAACAGAGATGGAATTGGAACTTGAAGCCTCGTCATCATCTTGCAAGGCAGACGGCAAAATGGACATTCCTATAGACCTAAACGAAATACCGTTTGTATGGGTATCTGCAAAAAATGAGTTCCATAAAATGTACAAGTGTCGATACTGTTCATATGTTAATTCGCAGAAATGTAAAATACCAAATCACGAAAAAATTCATTCTATTGTTTTTGAAAACAGTGAAATCACTATTTACAAATGCTTAGAGTGCAAATTTACTTGCGACAATGCGGGAAGATTGGCTGAACATTCGAAAACGCATGGCGAAATATACGGTCGCATTTACTGCCCCGTTGAACCAGACATTCCGGATGAAGAACAGATCGCCAAGTTACGGAAAGTGATAGAAGTTGAAAAGCTTAACAACACTGAATGTCCCAAGGAAGAGATTGTTACAAAAGAATGTGAAGacgttaaaatattatatttttgtcacAAATGCCCAGCTAGATTCTTTATTGACAGCGACTTACGGGTTCATGACAAATTTCACGATCTAATGTTTGCaaacaaatgtaaaaattgTGAATTTTCTGTACCGCAAGAAAATGAGTTAAACACTCATGTGGCATGCCATTCAGACGAAtaccaaacaaaaactaaaatgctGAAATTCATGCACCGATCTCACCCGGCGCACAAGGAACCCAAGTTGGAGCTCATACATTGCCCAGTGACTTCAGATATTAATTGGATCGTATCAAACCCGACCAAAAATTATGACATAGTGGATTCTACGAAAAAGAGCAACGAATCTCGGAGCGTTCCcaaacaatatttttgcaaaGAATGTCCAGCTAAATTCTTTAAAACTTCAGCACTAAGCTATCACGCGGGATTGCATGGAGGCGAAGGCGATCACAAGTGTAAAAAATGTAGTTATACTGTTAAAAACTTAGGAAATCTGGCCAAACATGAATCATTACATGAACATGAGGGTAAAACGACCACATGCGATTACGAGTCTGGTGAAGATAATGATTACAAAAACGTTCCCTTATCTGGCACAGATCTATTCCAAAGGAAAACTGAAGCTCAAAAAAGAGTGGTCTCCGACAAAAATAAGTTAGTGAAACCTAACGACCACTTCCCACCTGTACTCCAAGCAGATCCACAATTTGGTTATCTAATGCACGGTAACCCAGAATTTATATATCCCACGTATTTAAAAAATGGTCGCCAGAAAGAAAAACGATACAAATGCCACAAATGTCCATCGGCTTTCGAGAAAAGAGAGCAGTATAAGATACATTTGTCATTGCACGGATCCAAACAGAGATACAAATGCGAAGTatgcgattattctgtaaaataCTACGCCAATTATGTTCAACATATGAGAAAACATCAAATGAACGACGAAGCTGTTGCTGAAAGGAAGAAAACTAACGAAGAGACAAATGAAGATGCTGAAAACGACACACAAGAAAGTAAACCAACGAAAGGAAATATCAAACTAGCAATTAAAACCATGCCAAAGGGACCGACTCGGCCTAAAAGCGATTTCCAACAATTTTCCGTAAGCGATCAGCAGACGCTCCGATTACTGCAGCTGAGACGGTCTATAAATAACGCAGAAAAGGAAAAGCACCCGGAGCCGTCCCCTACAAAAGAGCGGAAGTTACATATGTGTTTGCTGTGCCCTTACTCGAATCAGCGCCAAGACGCACTAGCGAATCATTACAAGCGGCATGACGATAACACCCATTCCAACAATGGGACTCACAAATGCTCTCATTGTGACCTGGTTGTCGTGCAATCACACTTCCTTCGTGAACATTTAAAGACCCATTTCAATTACCAGAAGAATCTAATCCCGGAATGCTTCGCGGCCAGTGAAGGAGTGACATTTGTAATAACAAAAGTAGACGATGAAGATATTAATAAcaagaaagaagaagacaaGGATGAAAAGAGAAGCGAGGAAAACGcggaaaaagaaattaaaagtgaACAGAAAAGCGATGACACAAGTGAAAAGAAAAGTGATGACAAAAAAGTTGAAAATGTCGTTAAAACTCCCAAAAGTGACTGCAATATAGACGATAAttcaactaatattataatagagttgaataaaaaaacttgttacGATTCTAACGAAAACAAGATCTTTGTTAGGCTTAAAACAGGAGAGCTTATTGTAGAATAG
- Protein Sequence
- MGLQYADIEMVSCNSDNDTSTETVTAKDDSALTPDLHSQQSPNSTSEDGKSHKQSRKIKKPIPQLIPLNSSTPNQNKSSSGEPPLKKPKRDSCLDSVPINTDNADILPVEISLTPVNNTPTTTKEPVVRKKNESFFDRLKERLLTATGEEGTLTCKNCGFESKCLSEHSVHEKNCTVPTNRVLANNTHTSLGSTRCQNCRHRCKSSADLFVHMKTCNKQEKAVNESTTDNKNKNEATVSTHQSDVLKEEPHPMENVVFVWNNISHDTAKFETPLDISINDDSTQPELSKNYDSEVVDDNEGMNLSPSQAAGKKVFKCPHCTFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVVNEYGETDFDYIDPNALANGNMDFDEPFNDTGENINVSLEMQPLNLQTQHDENRFGIIDDKNEDSKKPKKTMWKCKKCNYRDPSKEALLVHVREHSKPEGSQEENKPFSLNKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDSALSLNEVNDTCTKCPFKATDRKQLLSHMQQHQPSPQSIFKCYFCPYFVKTEHDLMQHLALHGITDPEEYIAKAMGCKSPLLEPQGPSGTSNSTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIITKKTEMELELEASSSSCKADGKMDIPIDLNEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHSIVFENSEITIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEPDIPDEEQIAKLRKVIEVEKLNNTECPKEEIVTKECEDVKILYFCHKCPARFFIDSDLRVHDKFHDLMFANKCKNCEFSVPQENELNTHVACHSDEYQTKTKMLKFMHRSHPAHKEPKLELIHCPVTSDINWIVSNPTKNYDIVDSTKKSNESRSVPKQYFCKECPAKFFKTSALSYHAGLHGGEGDHKCKKCSYTVKNLGNLAKHESLHEHEGKTTTCDYESGEDNDYKNVPLSGTDLFQRKTEAQKRVVSDKNKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAVAERKKTNEETNEDAENDTQESKPTKGNIKLAIKTMPKGPTRPKSDFQQFSVSDQQTLRLLQLRRSINNAEKEKHPEPSPTKERKLHMCLLCPYSNQRQDALANHYKRHDDNTHSNNGTHKCSHCDLVVVQSHFLREHLKTHFNYQKNLIPECFAASEGVTFVITKVDDEDINNKKEEDKDEKRSEENAEKEIKSEQKSDDTSEKKSDDKKVENVVKTPKSDCNIDDNSTNIIIELNKKTCYDSNENKIFVRLKTGELIVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023319;
- 90% Identity
- -
- 80% Identity
- -