Acni003618.1
Basic Information
- Insect
- Aethes cnicana
- Gene Symbol
- Hr39
- Assembly
- GCA_963971205.1
- Location
- OZ020272.1:26813847-26842288[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.17 1.6e+03 -1.2 3.2 80 163 209 292 159 327 0.58 2 3 3.4e-08 0.00031 20.9 0.1 1 23 425 447 425 466 0.88 3 3 1.5e-64 1.4e-60 206.5 0.0 164 408 487 743 453 743 0.83
Sequence Information
- Coding Sequence
- ATGGCGACGGAGAGCGACCcggtgaaggttgaaggaggaCACGTGTCTGTCACCACCATCAGCATGTCGGGCCCGGAGAGTAGCAACGGTCAGTTCTCGTACAGTTCGAGCGGAGTGCGCATCAGCGTGTCTTCTGACCCCCACGACGAGGACTCTACCGACGCCGAGATATCGAAGATAGACTTCTCACAGCACCAGTTTGAGGTGAACATGCGCAACAAGAAGAAGAGATCGTCGAGCGGGCACGAGCCGGGCGACACGGAGCGCCCCATGTCCTGGGAGGGCGAGCTGTCCGACTCGGAAATGGTCATAGACACCAGCGTCAATATGCACGAGCCGAGCAGCTCGCCGGAGCTGCGGTCGTCGCGCGACTCGATCGACACGCTGCGCAACGTCACCGTCAAGAGCGAGCTGAAGGCCGAGGCCGGCGCGGGCCGCGGGCTCCCGCGCGCGCTGGACCTGCCGTACGCGCCGCTGCAGCCGCACCAGCGCAGCCTCAGCATGAACCGGATATCAGTTCTCACTGACAACAGCGCGCTGCGGCGGCCGTGCTCGCCCCCGGGGAAGATCGAGCAGACCATGCACCTCATGCCGCATCCCTCGGACGAAATACAGAACCTCACTATTAAGAAGGAGACGCATCTGTCCGAGCTGAAGTGCGAGCCATCGGCGGGTATGGACAAGCTCCTGGGCGCGCTACACGgctccccactgctgggccgACTGCCGCGGGTCCAGTCCAGCGCGAGCACCGACTCGGCGGTCCACTCCATGTACACTCACAGCGTGTACAGCAGTCCGTCGGCGAGTCCGCGCGCCTCGCGGCACTACACGCCGTCTCTCTCCCGCAACAACAGCGACGCGTCACACTCTTCCTGCTACTCATACAGCTCAGAATTCTCGCCCACGCACTCTCCGGTCCAGGGGCGGCATCCGCACGTGCTGTACCGCGAGCCGGCGACGGCCGTGTTCCCGCCGTCGCCCGCGCACGAGGACGACGACCCCGCCGACGATCGCCTCCACCACCACCAGGGCATCAGCCGGCAACAGCTGATCAACAGTCCATGTCCAATCTGCGGCGACAAGATCAGCGGCTTCCACTACGGCATATTCTCGTGCGAGTCGTGCAAGGGCTTCTTCAAGAGGACGGTGCAGAACCGCAAGAACTACATGTGTCTGAGGGGCGGCAGCTGTCCGGTGACCGTGGCGACGAGGAAGAAGTGCCCCGCGTGCCGGTTCGACAAGTGCCTCGGGTGCGGGATGAAACTTGAGGCCATCCGGGAGGACCGGACGCGCGGCGGGCGCTCCACGTACCAGTGCTCGTACACGCTGTCCGGCGCCGTGTCGACGGGGTCGCTGCTGTCCGCGCACGCGCCCGCCACGCTGCGCCACGCCTCCAGCCTTACTTGCgtaaacGGTCCGGGGTCGTACAACAGTCGAGGCGAGTCGAGCAACAGTCGCCTGACGCCGGACATACCACCGTTGTTGCAGGAAATAATGGACGTCGAGCACCTCTGGCAGTACAACGAGTCGGAGCTGACGCGGCTGGGCAAGTCCTCCGGCGCGCCGTCCGCCAACCCGCTGCTGGCGGCGAGCGGCATCACGGCGCACGGCGCCAGCCCCGACTTCCTAGCCGACCTGTGCAACATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGCTCTTTAAGAACATCTCGATCGACGACCAGATCTGCCTGCTCATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCGGCACGCCGGGCGAGGTGCGCGTCGGCGGCGGCCGCGGCATCACGCTGCACCAGAGCGCCAAGTTGGGCTTGACCCCGTGCATAGAGCGAATGCTCAGTTTCACCGACCACTTGAGACGGCTACGAGTCGACCGATACGAATACGTTGCGCTAAAAGTCATCGTACTTCTCACATCAGACGCGCCCGAGCTACGCGAGGCGGAGAAGGTGCGCGCCTCGCAGGAGAAGGCCCTGGCGGCGCTGCAGGCGTACACCGCGGCGCACTCGCCCGACACGCCCGCCAAGTTCGGCGAGCTGCTGCTGCGCATCCCCGAGCTGCAGCGCACCTGCCAGtttttcatGCAAGTCGGTAAAGAGATGCTGAATCCGGCCAATAAGAACAAAGATGGCGACGGTCCCAGCTTCAACCTGCTCATGGAGCTGCTGCGCGGCGACCACTGA
- Protein Sequence
- MATESDPVKVEGGHVSVTTISMSGPESSNGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFSQHQFEVNMRNKKKRSSSGHEPGDTERPMSWEGELSDSEMVIDTSVNMHEPSSSPELRSSRDSIDTLRNVTVKSELKAEAGAGRGLPRALDLPYAPLQPHQRSLSMNRISVLTDNSALRRPCSPPGKIEQTMHLMPHPSDEIQNLTIKKETHLSELKCEPSAGMDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVLYREPATAVFPPSPAHEDDDPADDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGSCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAVSTGSLLSAHAPATLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELTRLGKSSGAPSANPLLAASGITAHGASPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTPGEVRVGGGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386822;
- 90% Identity
- iTF_00409344;
- 80% Identity
- iTF_00022905;