Ahon010999.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- ken
- Assembly
- GCA_005406045.1
- Location
- BHDV01048562.1:177437-188944[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 7.6 4.3e+02 1.9 0.7 3 20 456 473 454 478 0.89 2 12 0.34 19 6.1 1.3 2 19 500 517 499 520 0.94 3 12 0.011 0.62 10.8 0.7 1 23 537 560 537 560 0.96 4 12 0.071 4 8.3 3.7 3 23 567 589 565 589 0.90 5 12 0.0026 0.15 12.8 0.3 2 21 641 660 640 661 0.96 6 12 8.6e-06 0.00049 20.6 0.8 1 23 723 744 723 744 0.98 7 12 1.3e-05 0.00072 20.1 2.5 1 23 750 773 750 773 0.97 8 12 0.05 2.8 8.8 2.3 2 19 784 801 783 803 0.94 9 12 0.032 1.8 9.3 0.5 2 23 815 838 814 838 0.96 10 12 0.00012 0.0069 17.0 4.1 2 23 846 867 845 867 0.97 11 12 0.00073 0.041 14.5 3.1 1 20 873 892 873 894 0.95 12 12 1.6 90 4.0 0.0 1 23 904 929 904 929 0.80
Sequence Information
- Coding Sequence
- ATGCTTTCACCACGAGATGACGACGATGATGACAGCCACCTCTGCATCAAATGCAACGCTACCATAATAGGACTCGACAACTACATAAAACACAGGAAAGAACGATGCACCAAGATCAAACCAGAACAAAAGGTGGAACTACCAATGGACACTTTAGAGCCTACTTACAATCTAGGCGCTGATGTGTTCTTTCAATCTTTAGAATTACAAAGCAGCGTGAAGAAGACGTCTTTGTCTCGCTTGACACCACCGATACCTATATCAAAAGCAAGTTTAGACAGGAAAAACGTTGTTGTTGCGTCTACTTCTAGGGATATACCAACAATGAGTCCTGTTGACGGTGACTTTAGAGGCGGTGATTGGATCGGAGGACACAGCTTAAGAATAGGCAGCAACGAGGACAATCAAACTAAACTCATCAATGCCGTTGCCAGCATAAGTGGTGCCGTCAAGAAAGACCTACCAACTTCTTCTTACAACATTGGACCGTTTAATTACTTTAAGGCTGATGAAGATACTGATGAATCAGAGGACTCGGAAGACGACGAAGACGAAGAACCTCCGACTGGTGGTAAATGGAAACCACCTCCGAACTATACTGGTGGTAAGTGGAGACCGGTTTCTCCGGAGCAAGAGGAATGGGTTATGAGAGATGAACAAGAGCATACGGGAGGCAAATGGAGACCAATAATGGCTGATGGTAATGATAgagatgatgattatgatgctCCGCCCCCTGGACACACTAAAGGTAAATGGGTTCCAGGAGCCAACGAAAAATCTCAAATCATGCAGACAACGTTACAAACAAAAGGATCTGTGCAGTATTGGTGTGGTCCTTGCAATAGGAGGTTAGGTTCGCGAGCAATTTACGAAAAACACTTGATGTCTAAGTTGCATATGAAGAGAGTACTTCCAGAGAATGAGCTTGAGTTTTCTGGACATCTGCAGCCTCTGAGACATCCTGTGCCTGTGGAGCAAAGCAGTCGCAAGTTACGCTCGAAAATCACACGACCTGTATCACAGAAAAAGAAACCAGTAACTTCAAAAATAGCTGAAGttgaaaaaaagaagaaaaggaAAAGGAAGCTACTCTTTGTTAACTGCCCCGGTTGTAAATCGAGAGTAAGGCAGCATTTGATGGGGAAACACCTTATATCCCACTACCACTTCCGCAAAGCTTCAACTGTGCAAAACCAAGTGTACCATCAATTGATTTTGAACAACATCGACGTCATCGTCCACCAATCTCCGTTCCAATGCAGCCCTTGCAAATTCTACACCAACTGGCTGCCGCATTTCATGCGTCATTGGTCTTCTGACGAGCACAGCGAGAAAACATCGTCAATGGATGGGAGATACTGGTGTTCCTTCTGCAAATACGAATGTAACACATCTGTTGAGATGCTGCTTCATCTAACTGGTCCAGATCACAGTGAAGTGGTCGCGGTTATTAATAGATCGATGCCAATTATCATAAGAAAAAGATCTATCCTAAAATGCGAGACATGCTATAAAGAATTTAGATACAATGCCGAGATCAGGAGTCATTGTCAGCTCTCAGGGCATCAATTGACCTACACAGCTACTGACGAATATCAGGAACTTCACAACTGTCCGCAATGCCTAGCGAAGTTCAAGTCTTCTCTCACATTAGCAGCTCATTTGAAGTCCGTTCATAAGCAGAAGACTCACTTATGCTTGGTGTGTTCTAAAACATTCTGTTCTTCGGAAGAAGCTAAACAGCACAGAAATACTTCTGAGCACAGACTGAGGAGAAGGGCCAATATGAAAGCTCGTGGAATACCTGTCAAGGAGATTAGTAAGAAGTGTCCTTATTGCATCGAGAGTAAAGTGGTTTTGTCGAATATTCTGGAGCTGAAAGATCATATCAGGCGTGTACATCCAAATAACAAGAAAAAGTGCCCAAAATGCGGTATGTCCTTCATCTTACACCAAGAAGTGACCCGCCACATCAGAGCCAACGCCTGCCAATTCCGCAACTGGCTGGGTCCTAGCTCCTCACAATCCTTCCAGCTCTGGAACTGCAGCCAATGCCTCTTCACAACAGATTCTCAAGCAGAATGTTACTTCCACGAGGTTCTCCACACGGTACCCGTAAAAGAAACCCTAACAGTTAAGAATAAGGAGAAGATTGTCCTCAAATATGAGTGTCCTCTTTGTCCCAGAAGTTTTAGAAAGTCTTCTTTACGGTTGCATTTGAGACAGCACACTTGTGAGAGGccttttgtttgtaaaatgtgTGGAGCCAACTTTACTAGGAAGAGCAGTTTGTGCAATCATGTTCAGAAAGAGCATCAGACGGTTAAAAAAGAGAAGGCAGATAGCCAGTGTGGGAGGTGTAAGAAGAAATTCCCGAGCAAagacgAGCTTTCCCTTCATTCGTGTGCAGCCTTAGTGAGTCCATCGACAGCAGAATTAAAATGCCCGTACCAGCAATGTACCTATGTCGCATCAACTTCCACGCAATTagcaaaACATTACACAAGCCACGGAGAGCGTCTGAAACACCTGAAATGCCCTCATTGCCCGTTCAAGACCGACCAGAGCAGCCACCTGAAGAGACATTTGATCACACATCAGGCCGTTAAGCCCTATAAATGCCCACACTGCGACTTTACTTGTGCTAGCTTGGAAAACCTTCGCAAACACGCCCTCCACCGCCGCTTGCACCCCGGGCTGCCGTTATACAAGTGCCGCGAAGACGCGTGCGCGTACGGCGCCGACACGGCGTCGCAGCTGCGCGCGCACCTCGCGACCGCGCACGCCGCGCGCCATCAAATCATAGAAGTGTCGGATTTAGGAACTAACCATTGCATTTCATTCTTGCTCCCGTTATACAAGTGCGCGTACGGCGCCGACACGGCGTCGCAGCTGCGCGCGCACCTCGCGGCCGCGCATGCCGCGCGGTACGGCGCGAAGGAAGCCGTGGCGGCTGTCAAACGACACCTGATGATAGAAtaa
- Protein Sequence
- MLSPRDDDDDDSHLCIKCNATIIGLDNYIKHRKERCTKIKPEQKVELPMDTLEPTYNLGADVFFQSLELQSSVKKTSLSRLTPPIPISKASLDRKNVVVASTSRDIPTMSPVDGDFRGGDWIGGHSLRIGSNEDNQTKLINAVASISGAVKKDLPTSSYNIGPFNYFKADEDTDESEDSEDDEDEEPPTGGKWKPPPNYTGGKWRPVSPEQEEWVMRDEQEHTGGKWRPIMADGNDRDDDYDAPPPGHTKGKWVPGANEKSQIMQTTLQTKGSVQYWCGPCNRRLGSRAIYEKHLMSKLHMKRVLPENELEFSGHLQPLRHPVPVEQSSRKLRSKITRPVSQKKKPVTSKIAEVEKKKKRKRKLLFVNCPGCKSRVRQHLMGKHLISHYHFRKASTVQNQVYHQLILNNIDVIVHQSPFQCSPCKFYTNWLPHFMRHWSSDEHSEKTSSMDGRYWCSFCKYECNTSVEMLLHLTGPDHSEVVAVINRSMPIIIRKRSILKCETCYKEFRYNAEIRSHCQLSGHQLTYTATDEYQELHNCPQCLAKFKSSLTLAAHLKSVHKQKTHLCLVCSKTFCSSEEAKQHRNTSEHRLRRRANMKARGIPVKEISKKCPYCIESKVVLSNILELKDHIRRVHPNNKKKCPKCGMSFILHQEVTRHIRANACQFRNWLGPSSSQSFQLWNCSQCLFTTDSQAECYFHEVLHTVPVKETLTVKNKEKIVLKYECPLCPRSFRKSSLRLHLRQHTCERPFVCKMCGANFTRKSSLCNHVQKEHQTVKKEKADSQCGRCKKKFPSKDELSLHSCAALVSPSTAELKCPYQQCTYVASTSTQLAKHYTSHGERLKHLKCPHCPFKTDQSSHLKRHLITHQAVKPYKCPHCDFTCASLENLRKHALHRRLHPGLPLYKCREDACAYGADTASQLRAHLATAHAARHQIIEVSDLGTNHCISFLLPLYKCAYGADTASQLRAHLAAAHAARYGAKEAVAAVKRHLMIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023334; iTF_00156742; iTF_00155794; iTF_01135287; iTF_00342731; iTF_00325904; iTF_00010673; iTF_01136277; iTF_00462936; iTF_00660896; iTF_00657855;
- 90% Identity
- -
- 80% Identity
- -