Dang008875.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ditula angustiorana
Gene Symbol
ken
Assembly
GCA_963691745.1
Location
OY829475.1:14309051-14317168[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.13 8.1 7.8 1.4 2 19 498 515 497 518 0.95
2 10 0.0026 0.16 13.2 1.1 1 23 535 558 535 558 0.96
3 10 0.19 12 7.2 3.6 3 23 565 587 563 587 0.90
4 10 0.16 10 7.5 0.4 2 21 639 658 638 659 0.90
5 10 4.6e-06 0.00029 21.8 0.9 1 23 721 742 721 742 0.98
6 10 1.5e-05 0.00097 20.1 2.5 1 23 748 771 748 771 0.97
7 10 0.0047 0.29 12.3 3.1 2 21 782 801 781 802 0.94
8 10 0.099 6.2 8.2 0.4 2 23 808 831 807 831 0.95
9 10 0.0001 0.0064 17.6 2.5 2 23 839 860 838 860 0.97
10 10 0.00088 0.056 14.6 3.1 1 20 866 885 866 887 0.95

Sequence Information

Coding Sequence
ATGCTGTCACCGCGGGATGATGATGACGACGATAGCCATCTCTGTATCAAGTGTAACGCCACGATTATAGGACTTGAGAACTACGTGAAGCACAGAAAGGAACGATGCGCCAAAACGAAGCCAGATCAAAAAGTAGATTTACCAATAGATACTTTAGAACCTACTTACAACCTGGGAGCTGATGTTTTCTTCCAATCTTTGGAACTGCAAAGCAGCGTTAAGAAGACGTCATTGTCGCGGTTGACGCCGCCTATACCAATATCAAAGGCCAGTCTAGACCGAAAAAGTGCTTTGGTAGTTGCATCTACTTCCAGAGATATACCAACCATGAGTCCAGTGGAAAGTAACTTTAGGGGTGGAGATTGGATCGGAGGACACAGTTTACGAATTGGCAGTAACGAAGATAACCAAACTAAATTGATTAACGCTGTTGCAAGCATAAGTGGAGCAGTAAAGAAAGACATACCCACATCTTCGTACAGTATCGGACCTTTTAACGATTTTAAGGCTGATGATGAATCTGATGAATCTGAGGACTCGGAAGACGATGACGAAGAAGAGCCTCCAACAGGAGGTAAATGGAAACCCCCTCCGAATTATACTGGTGGTAAATGGAGGCCAGCATCTCCAGAAAATGAAGAATGGGGGATGAGAGATGAGCAAGAACATACGGGAGGGAAATGGAGACCTATAATGGCTGATGCTAATGAAAGAGATGAAGATTATGATGCTCCGCCTCCAGGACATACTAAGGGCAAGTGGGTTCCGGGAGCCAATGAAAAATCTCAGATCATGCAGACAACTTTACAGACGAAAGGGTCAGTTCAGTACTGGTGTGGCCCATGTAATAGAAGATTAGGTTCACGAGCGATTTATGAGAAACATCTAATGTCCAAATTGCATATGAAGAAAGTACTACCAGAGAATGAGCTTGAGTTTTCTGGACATTTACAACCAATAAGAAGCATTGTAGAACAGAGCAGTCGAAAATTACGGTCTATTACTAAACCTGCATCCCAGAAAAAGAAAGTTACAACTATAAAAGTTAACGAAGttgagaagaagaaaaaaagaaaacggaAACTACGATTTGTTAACTGCCCCGGCTGCAAATCGAGAGTTAAGCAGCATTTAATGGGGAAGCACTTAATATCCCACTATCACTTCAGAAAAGCTTCCACGGTGCAAAGTCAAGTGTATCGCCAGTTGATTTTAAACAACATCGATGTCATTGTTCACCAATCCCCGTTCCAATGTAGTCCTTGTAAGTTCTACACGAACTGGCTATCACATTTCATGCGGCATTGGTCATCCGATGAACACAGCGAAAAAACGCTATCAATGGATGGAAGATACTGGTGTTCCTTCTGCAAATATGAATGCGATACGTCTGTCGAGATGCTACTCCACCTAACCGGCCCTGATCATAGCGAGGTCGTCGCTGTAATCAACAGATCTATGCCCATTATCATAAGAAAACGAAGCATTCTAAAATGCGAGACGTGCTACAAAGAGTTCCGTTATAACGCTGAGATTCGGCGGCACTGTCAACTCGCAGGTCATCAGTTGACATACACGGCTACTGACGATTACCAGGAACTCCACAATTGCCAACAATGCGATGCGAAGTTCAAGTCTTCTCTCACTCTGGCTGCCCATTTGAAGTCCGTTCATAAACAAAAGACACATTTATGCTTGGTATGCTCTAGAACGTTCTGTTCTTCGGAAGAAGCGAAGCAACACAGGAATACTTCGGAGCATAGGTTGAGGAGGCGGGCTAATATGAAAGCACGTGGATTGCCTGTTAAAGAGATTAGTAAGAAATGTCCATATTGCATCGAGAAGAAGGTTGTATTGGCCAACATCTTGGAACTAAAAGACCACATTAGGAGAATGCatcctaataataaaaaaaaGTGTCCCAAATGCGGCATGTCGTTCCTCCTACACCAAGAAGTGACTCGCCACATCCGAGCCAATGCCTGTCAATTCCGGAACTGGCTTCCTCCTAGCTCCTCGCAATCTTTCCAGCTCTGGAACTGCAGCCAATGTCTCTTCACAACCGACTCTCAAGCTGAGTGCTTCTTCCACGAAGTTCTCCACACCACTCCTGCCAAGGAAACTCAAAGGATAGAAGACAAGGAAAAAATTATACTGAAGTACGAATGCCCTCTATGCCCAAAGAGTTTTCGGAAATCTTCGCTACGTTTACATCTGAGACAGCATACGTGTGAAAGACCCTTTGTGTGCAAAATGTGTGGAGCAAACTTCACAAGGAAAAGCAGTTTGTGCAATCATGTACAGAAAGAGCATGAATCGTCTAAAGACAAGGATGAGGAAAGCCAGTGTGGGAAATGTAAGAAGAAGTTTACGAGCAAAAACGAGCTTTCTTTGCATTTGTGTTCAACGACGACGGAACTAAGCTGCCCTTTCCAACAGTGCACCTACGTCGCATCAACGTCTACGCAGTTTGCTAAACATTACGCTACCCACGGCGAGCGTCTGAAACAACTGAAATGTCCAAAATGTCCATTCAAGACTGATCAGAACAGCCATCTGAAGAGGCACCTCATAACGCACCAAGCTGCCAAGCCGTATAAATGCCCACATTGTGACTTTACGTGTGCTAGTTTGGAAAATCTTCGCAAGCACGCCCTCCACCGACGGCTGCACCCGGGTTTGCCGCTGTACCGCTGCCGCGTCGGCGCGTGCGCATTCGGCGCCGATACCGCAGCGGCCCTGCGCGCGCACCTCGCCGCGCAGCACGCCGACCAGTACAACGCACGTGACGCAGTCGAGGCTGTCAAACGGCATTTGATGATAGACTGA
Protein Sequence
MLSPRDDDDDDSHLCIKCNATIIGLENYVKHRKERCAKTKPDQKVDLPIDTLEPTYNLGADVFFQSLELQSSVKKTSLSRLTPPIPISKASLDRKSALVVASTSRDIPTMSPVESNFRGGDWIGGHSLRIGSNEDNQTKLINAVASISGAVKKDIPTSSYSIGPFNDFKADDESDESEDSEDDDEEEPPTGGKWKPPPNYTGGKWRPASPENEEWGMRDEQEHTGGKWRPIMADANERDEDYDAPPPGHTKGKWVPGANEKSQIMQTTLQTKGSVQYWCGPCNRRLGSRAIYEKHLMSKLHMKKVLPENELEFSGHLQPIRSIVEQSSRKLRSITKPASQKKKVTTIKVNEVEKKKKRKRKLRFVNCPGCKSRVKQHLMGKHLISHYHFRKASTVQSQVYRQLILNNIDVIVHQSPFQCSPCKFYTNWLSHFMRHWSSDEHSEKTLSMDGRYWCSFCKYECDTSVEMLLHLTGPDHSEVVAVINRSMPIIIRKRSILKCETCYKEFRYNAEIRRHCQLAGHQLTYTATDDYQELHNCQQCDAKFKSSLTLAAHLKSVHKQKTHLCLVCSRTFCSSEEAKQHRNTSEHRLRRRANMKARGLPVKEISKKCPYCIEKKVVLANILELKDHIRRMHPNNKKKCPKCGMSFLLHQEVTRHIRANACQFRNWLPPSSSQSFQLWNCSQCLFTTDSQAECFFHEVLHTTPAKETQRIEDKEKIILKYECPLCPKSFRKSSLRLHLRQHTCERPFVCKMCGANFTRKSSLCNHVQKEHESSKDKDEESQCGKCKKKFTSKNELSLHLCSTTTELSCPFQQCTYVASTSTQFAKHYATHGERLKQLKCPKCPFKTDQNSHLKRHLITHQAAKPYKCPHCDFTCASLENLRKHALHRRLHPGLPLYRCRVGACAFGADTAAALRAHLAAQHADQYNARDAVEAVKRHLMID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00021729;
90% Identity
iTF_01136277;
80% Identity
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