Apis009845.1
Basic Information
- Insect
- Acyrthosiphon pisum
- Gene Symbol
- TFIP11
- Assembly
- GCA_005508785.1
- Location
- NC:19120802-19125670[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.29 2.4e+03 -2.3 0.0 137 155 284 301 279 324 0.73 2 3 8.2e-76 6.9e-72 242.2 18.7 13 275 380 636 367 636 0.96 3 3 0.33 2.8e+03 -2.5 0.1 237 259 643 665 638 679 0.52
Sequence Information
- Coding Sequence
- atgtctgacgatgaaatggaaaaatttgaaattactgATTTTGATTTGGACAATGAATTTAATATGAACAGACCCCAAAGACGACTAACTAAAAATCAAGCAATTTACGgaatttgggCCGATGAAGAAGGTAATGATAGTGATGATGAACCTTCAGGTTTTGGGGGCCGTAGAAACAAAgataagaaatataaacaaaactacACTGCTCCCGTTTCATTTGTTGCTGGAGGAGTTCAACAGGCTGGCAaagataaaaaagaaattaaaactgAAGAAAAAAAAGGCAACGAGTTGCACAATTTGGAAGATAATATTTCTGCATCTAGtgaTGAAGAAAAACCAGCATTTAGTTTTGATATTGATCAAGAAGTGGCAGGTTTACGAAAGAAACGAGCTCAAGTAAACTCAAGACTAATAGACAAAGGATTAGGAGATTGGGAAAAACATACAAAAGGAATTGGCGCAAAACTGTTGCTCggaatggGTTACCAACCAGGTCAAGGTTTAGGAAAAAAACTTCAAGGTATTCTGGCTCCAATTGAAGCAAATTTAAGAAAAGGAAGAGGAGCGATtgGTGCATACGGTCCGGAGTCTAAAACTAAACcaatgaaaatagaaaaaataacagaaaaatcAAAAGATAACAAAGTTCTTGTAAGTGGTTGGAGAAAAGCACGTAAAGCCGAAaaacttcaatataattataaaaccgcTGAGGAAGTAATTGAAGAAAGCAAACAACCAGGACAAAGAAAACGAGAATTCAAtgAACTAAGTAGAGTAAAAGTAATTGATATGACTGGTCCAGAACAAAGAATTTTATCTGGATATCATGCTATATCCGGCGTTAAAAAGCCAATAGATCAGTGGGAAATtcgaaaagataaaaaatactcAAATTTTGATCTACCTGAATTATTACACAATCTCAATCTATTAGTTGAAATTGCTGAACaaaatattgtaaCTAATAATCAAGAACTTTGTAATTCGGAGGATCGGCTTATTGTCATTGAacaagaatctaaaaaattaggagaaaatataaatgaaaaaagtaaTTCAATTGAATCTCttgaaaaaatgataattatcatGGAATCTATAAatgatgcattaaaaaaaaaaaaatttGAAAATTACTACCCAGATTATCGGTTGAATGGTGGATCAGTTTTCGCTTTATCAATTTCTCAAATATTGATTAAAGAAATGCTATCTACATGGGACCCATTACAAGATCCAACTATGCCCTTCAAAGAACTCAATAAATGGAAagaattattaactttaaatgagCCATGTGCTGTTGGTTTTCAGTCAAGTGatgaatttcaaacattaatttGGCAAGAATGGGTACCTCAAGTTCAAAAAGCATgcaggcaATGGAATTGTAGAGATTGTAACAGTATGATGAAACTTATTGAACAATCATCTGAATTGATACCATCTGACATAATTAATCATGTTcttgaaaatatgattttaccacAAATACAGTTAGGAGTAGAACAATGGGATCCATTGACTGATCTTGTACCAATCCATTTGTGGATTCACCCTTGGCTGCCATATTTAAgTAAACATTTCGAAACAATTGTTTATCCTACGCTGAGACAAAAATTAAGTGTAGCATTAAATGCCTGGCATCCATCTGACAACTCTGCTAAGTTGATGCTTCAACCATGGTTAAAGGTTTTCCAGCAAGGCTACATGGACgcttttctaattaaaaatattgttcctaAATTACAAGCTGCTCTGCATACTTTTGTTATCAACCCACATCATCAACAATTggacaaTTGGAATTGGGTAAATGCATGGTCAGATGTATTACCATTACCCACATTAGTGGAATTGTTAgaccaacatttttttccaaattggCTTAAAACCCTTACTATGTGGATAAATATGAATCCCAACCATGAACAAATAAGTAACTGGTATACAGGATGGAAGTCTTTAATGCCTGCTGTTATTGTTGAACATCCAACTATTAAAGGGAGGTTTCATTCTGCTTTAGATATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACAACCACCTCCACCACCTACAATTcacggtgGTCTAGCTGAAGCTGTACGTACTGCATCACAAATGCCGCATGGCTTTAAAGAATTAGTACAAAAGCGTTGCGAGGAACGAGGTATTTTATGGATGCCTATTTCTGGTCGTTTTAGAGAATCTAAACAAGTATATAGATGTGGAGCAAGGCTTCAAGCATTTATTGACCGTGGAGTTTTATTTGTTTGCCAAGATGGAATAAATTTTGCTCCTATGTCTGTACAATCCATGTTAGAACTatgcgaataa
- Protein Sequence
- MSDDEMEKFEITDFDLDNEFNMNRPQRRLTKNQAIYGIWADEEGNDSDDEPSGFGGRRNKDKKYKQNYTAPVSFVAGGVQQAGKDKKEIKTEEKKGNELHNLEDNISASSDEEKPAFSFDIDQEVAGLRKKRAQVNSRLIDKGLGDWEKHTKGIGAKLLLGMGYQPGQGLGKKLQGILAPIEANLRKGRGAIGAYGPESKTKPMKIEKITEKSKDNKVLVSGWRKARKAEKLQYNYKTAEEVIEESKQPGQRKREFNELSRVKVIDMTGPEQRILSGYHAISGVKKPIDQWEIRKDKKYSNFDLPELLHNLNLLVEIAEQNIVTNNQELCNSEDRLIVIEQESKKLGENINEKSNSIESLEKMIIIMESINDALKKKKFENYYPDYRLNGGSVFALSISQILIKEMLSTWDPLQDPTMPFKELNKWKELLTLNEPCAVGFQSSDEFQTLIWQEWVPQVQKACRQWNCRDCNSMMKLIEQSSELIPSDIINHVLENMILPQIQLGVEQWDPLTDLVPIHLWIHPWLPYLSKHFETIVYPTLRQKLSVALNAWHPSDNSAKLMLQPWLKVFQQGYMDAFLIKNIVPKLQAALHTFVINPHHQQLDNWNWVNAWSDVLPLPTLVELLDQHFFPNWLKTLTMWINMNPNHEQISNWYTGWKSLMPAVIVEHPTIKGRFHSALDIMSRAVGGPSMPQPPPPPTIHGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPISGRFRESKQVYRCGARLQAFIDRGVLFVCQDGINFAPMSVQSMLELCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037788;
- 90% Identity
- iTF_00184574;
- 80% Identity
- -