Alep017789.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- IKZF1
- Assembly
- GCA_947256265.1
- Location
- OX366513.1:5846842-5854828[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 4.7 3.6e+02 2.4 1.5 1 23 54 77 54 77 0.94 2 21 0.026 2 9.4 4.1 1 23 84 107 84 107 0.97 3 21 1.5 1.2e+02 3.9 4.3 1 23 189 211 189 211 0.97 4 21 0.0016 0.13 13.2 1.0 2 23 217 238 216 238 0.97 5 21 2 1.5e+02 3.5 1.4 1 23 244 266 244 267 0.94 6 21 0.2 15 6.7 3.4 2 22 512 532 511 532 0.95 7 21 0.083 6.4 7.9 2.6 1 23 629 651 629 651 0.95 8 21 0.57 44 5.2 0.3 2 23 789 810 788 810 0.96 9 21 0.005 0.39 11.7 0.6 2 23 891 912 890 912 0.96 10 21 0.049 3.8 8.6 0.2 1 23 920 942 920 942 0.97 11 21 4.8 3.7e+02 2.3 2.6 1 23 978 1000 978 1000 0.93 12 21 0.00023 0.018 15.9 4.0 1 23 1008 1030 1008 1030 0.99 13 21 0.13 10 7.3 2.5 1 23 1111 1133 1111 1133 0.98 14 21 0.43 33 5.6 0.7 1 19 1189 1207 1189 1211 0.93 15 21 2.1 1.7e+02 3.4 0.0 2 23 1219 1240 1218 1240 0.95 16 21 0.12 9.4 7.3 1.9 1 23 1307 1329 1307 1329 0.94 17 21 0.0052 0.4 11.6 1.1 1 23 1335 1357 1335 1357 0.96 18 21 0.0065 0.5 11.4 2.6 1 23 1447 1469 1447 1469 0.97 19 21 0.00016 0.012 16.4 1.4 1 23 1475 1497 1475 1497 0.99 20 21 0.8 62 4.8 2.7 1 23 1588 1610 1588 1610 0.96 21 21 0.0094 0.73 10.8 5.6 1 23 1621 1643 1621 1643 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGCTGAGAGCACAAGTCGGCGAGGTCGCCACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTCTCTTCGGAGGCTTCCTCAGATGCCGCGGAAGATTCTGAATTACCACAGTGCAAGATAAGAAGGAATTATAATTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTTGTCCACACGCGTGACACTCACTTTGTAAAACTTAAGATTTACGATTGTCCACACTGCGTTTACGCTTCGAGACATCATCAGAAACTGATAAGACATATCAAAATGGTTCACGCGGAATCGAAGCAGTCACCTCCGACTGGAAAGCTAGATACTGAGTTATCACCACCCACATACGACAATGTAGAGCAAGCAGAGCGCATCGAAGACTTACTGGAAGAAATCGAGGACTGCGAAGATATGATGATGGAAGTGGACGACGACTCCTTCGAACGCCCTGATGACACTGAAGTCGAGTGCGATAGGGGTGTAGACCACACAGCATCCTCTGAAGTCTTAAAAAGTAAGGGCAAGTTCTTCCAATGTGATAAGTGCAACTATGTAACCCACATAAAAGCTAGATTCACAAAGCACGTCAAGTACCATTCGATGCCAATGATCAAGTGTACAATGTGTGATTTCCGAACACCCTACAAATGGAATTTGGATCGTCACATGAAAAACCACGGTGGAACTGGAAGTTTCAATTGTTCGATGTGCAACTTTACCGCGGACATCAAGCAGAGTCTGACGGTACATGAAATGAATCATCACACACCGTCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGGAACCGGGTGGGCGCCAGCGACACGGTTATTGCGGAGTTCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGTTCTCGGACATGGGTCTACAATACGCAGAAAGGGAAATAGTCAGTTGCAAAAGTGATTCAAATGACGCTACTGCTTCTGACGCAATTACCAAAAAAGATGCTTCGCACGCGTCACAGGATGGCTACAACCAGCTTTCACCGAACCACAGCGCTGATGAGAAGTCACACCGACAGAACAGAAAAATTCCCAGACCAATACCACAACTCATACCGCTAAATGCATCGACTCCAAACCAAAAACCAACATGTCCCGGTGAACCGCCACACAAAAAATTTAAGGAATCTGAACCAAACGACATGGAAGATTCCAATTCTGGAAGTAAAACTGAAGACTTCTCTAGTGATATTACTCTATTACCTGTAAATTCGTCAATCAAAGAGACCGCAAGCCGTAAGAAAAACGAATCGTTTTTCGACAAATTGAAAGAAAGACTACTAACTGAAACCGGTGAAGAAGGATCTCTTAAATGCAAAAATTGTGGATTTGAAAGCAAATGTTTGTCAGAGCATTCTGTGCACGAGAAAAATTGTTTACCACAAACTAACCGGATCAATGCAAACTCTTCACTTACAAGTTTAAGTTCAACTCGGTGCCAAAATTGCAGGCACAGATGTAAATCCAGTGCTGACTTATACATCCACATGCAAACTTGCAGAAAGAATGAACAGACGGAAGACGAAAATACTATAAAAAGCCAAGATAGTAATGATGCAATCATTCCAATCCATGAAAAAGAGACTGAACCACATCCAATGGAAAACGTCGTGTTTGTTTGGAACAATATTAGTCACGACACTAACAAGTTTGATATACCTCTTGACATCAATATAAATGATGATAGTACTCTACCAGAAATACATAGAAGCTTCGATGCTGAAGCTGTCGATGAGAATGAAACTATGAATTTGTCGCCGAGTCAAGCTGTGGGACGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACTACAGCATCAAGATTTCACGTTCACATTGTTGGTCACTTAAACAAGAAACCGTTTGAGTGTTCCCTCTGTAAATATAAATCTAATTGGAGATGGGATATAACCAAACATATAAAATTGAAATCCGCGAGAGATCCAGAGCATAACGATGCGAAAGTATTAATGACTGATGAAACAGGACGAAGAAACTATAGCAAATATAACAAATTCTTAGCAATGCCAATTTTAAATGAGAATGGTGAAAATGAATTTCATTATCTAGATCCTAACACATCGGTTGATGGCACGATGGAAATAGACGAATCATTAAATGATGTATCAGACGTAATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACAGTGAAGATAAATACGACTTTATCGATAATAACAGAGGTCTACTGGATTTGAAAAAACCTAAGAGGACATTATGGAAATGCAAAAAATGTAATTACAAAGATCCGTCAAAAGAAGCTTTACTAGAACATGTACGTGAACACTCCAGATCGGATGGCATCCAGGACGAATCAAACAAACATCCTATTACCAAGAAAACTGAAAATAATACTCCCGATCCAGCAGACCTGGCGTATCGTTGCGGTCATTGTAATCAACTATCTAATTGGAAACATGTCATCCAGCGTCATTGCCGATTGAAACACGACGGAGTCATAAAAGTCATAACTACAGTTAAACCAAAACCAGACCCACCAATGAACATTAATGAGATCAACATCGACACCTGCAATAAGTGTCCGTTCCGATCAAGTGACAAAAAACTACTTATCGCCCATTTGCAACAACATCAACCTTCGCCGAATTCAATTTTTAAGTGCTACTTCTGCCCATATTTCGTAAAGGATGAACCAGAACTAATTCAACATCTTCTCCTTCACGGTATCACTGACCCAGAAGATTACATTGCAAAAGCAATGGGCACAAAATCGCCAGTGCCAGAACAGCACACAACTGCAACTTCTTCATTAAACTCCACTAAACGTCACAAATGTATAGAGTGCCCATACGAAACCAACAGCAAGTCACAGTTCATGTATCACGAACAGTTCCATCGACTTCCGGCTGACACCCCTTATAAATGTCCAGAATGTAACTACAGCGTGTCTAAAAGGCACTTGCTCCACCAACATCTGCGAGTTCACGGAATCGCTAACAAAAGAGTTGAGAGTGAGGCCGACTTAGAAGCATCGATATCAGCTCAAAATAAGTCGGACTTAAAATTAGATTTAGATGAAATACCGTATGTTTGGGTATCAGCAAAGAACGAATTTCATAAAATGTACAAGTGCCGGTACTGTTCATATGTAAATTCCCATAAATGCAAAATTCCCAATCATGAAAAAATACATTGTATTGTGTTTGAAAACAATGACACAACAATTTACAAGTGCTTGGAATGCAAATTTACATGTGACAGCGCCAGCAGGCTAGCTGAGCATTCTAAATCCCATGGCGAAATATATGGACGCATATATTGTCCGGTTGAAGAAGATGTGCCCGATGAAGAACAGATTACCAAATTACGGAAAGTTATAGAAATTGAAAAATCAACCAATTCGGAAGGTTTTCCTAGAGATGAAAGCTCAGCAAACGAAAGTAGAGAAATAAAATTGTTATATTTCTGCCAAAAGTGTCCAGCAAGATTTTTCGATGACGACGAATTAGAAGCTCATGACAAGTTTCATGATGTAACAACTCACACAATTGTATGTAAAAGTTGTGAATTTTCAGTTTCCGAGGATGACCAATTGGCAGCGCATGTCACCGTTCATACAGATGAATATCATACCAAAACTAAGATGCTTAAATTTATTCACAACTCACATCCTTCTCACAGACAACCCGTGCTAGAGCTAGTGCACTGTCCAAATACTTCTGAGATTACATGGATAGCTACAGGTCCAAGCAAAATTGAAAATGTCGAAAGTTCTACGAAAAAGACTACTGATACTAAAAACGTGCCAAAACAATATCATTGCAAATTATGTCCTGCAAAGTTTTTCAAAACTTCGGCGCTTACCTATCACTTGGGTTTACATGGAGGCGAAGGTGAGCATAAGTGTAAGAAATGTAATTACGCCGTAAAAAATATTGGAAATTTAGCCAAGCATGAATTATTGCACGAAAAAGAGAATAAGGCTTCCAATTGTGATTACGAATCTGGTGAAGACATGGATTATAAAAATATTCCATTGTCGGGTACAGATCTGTTCCAGAGAAAGACTGAGGCTCAAAAAAGAGTTTTAACTGATAAAGATAAGTTAGTTAAGCCAAACGACCATTTTCCGCCAGTCTTACAGGCCGATCCACAATTCGGTTATTTGATGCATGGTAATCCCGAATTTATATATCCCACGTACCTGAAAAATGGGCGGCAAAAAGAAAAGCGATATAAATGCCACAAGTGCCCCTCAGCATTTGAAAAACGAGAACAATATAAAATTCATTTATCATTGCATGGTTCCAAACAAAGATACAAGTGTGAATTATGTGACTATTCAGTAAAATACTACGCTAATTATGTTCAGCATATGAGGAAACATCAAATGAACGATGAAGCTCAAGCAGAAAGAAAGAAAAGTAACAATGACTATGTAGAATCTGAAAATCAAAAAGACATTAAACAAGACGACAGTAGTGATAATATTAAACTTGCAATAAAAACTATGCCAAAGGGGGCTCCTAGGAGTGACTTTCAACAATTCTCAATAAGTGACCAGCAAACGTTGAGACTGCTGCAGCGAAGGCGGTCGATGCATAATTCTAGCAAGGATGCAACATCTGAAGTTTCGCCTACAAAAGAACGCAAAATGCACATGTGTTTATTATGTCCCTACACAAATCAACGTCAAGATTCTTTAAGTAATCATTATCGAAGGCACGGCGACATCGATGTTCTTAATGCTGGAAGCCATAAATGTTCGCACTGCGACCTTGTAGTCGTGCAATCACATTTTCTGCGAGAGCATCTCAAGACCCACTTTAACTACCACAAAACTCTTGTTCCCGAATGTTTTGTGGCTAACGAAGACGTCAGTTTTACTATAACTAGACTGGATGAAGACAGGGAGTCGGTTGATCTCAAATTAGATGTGCAGAACAAGAAATTCGCATGTAATGATGAAAAGATATTTGTGAAAGTTAAAACAGGAGAACTATTAGTAGAATAA
- Protein Sequence
- MLQQMSSPLRAQVGEVATIVRHLEGRVCGDVSSEASSDAAEDSELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDTHFVKLKIYDCPHCVYASRHHQKLIRHIKMVHAESKQSPPTGKLDTELSPPTYDNVEQAERIEDLLEEIEDCEDMMMEVDDDSFERPDDTEVECDRGVDHTASSEVLKSKGKFFQCDKCNYVTHIKARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFNCSMCNFTADIKQSLTVHEMNHHTPSAGQSLSSRRRNRVGASDTVIAEFDAASALLPKEEEGSGDSRSSHSFSDMGLQYAEREIVSCKSDSNDATASDAITKKDASHASQDGYNQLSPNHSADEKSHRQNRKIPRPIPQLIPLNASTPNQKPTCPGEPPHKKFKESEPNDMEDSNSGSKTEDFSSDITLLPVNSSIKETASRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCLPQTNRINANSSLTSLSSTRCQNCRHRCKSSADLYIHMQTCRKNEQTEDENTIKSQDSNDAIIPIHEKETEPHPMENVVFVWNNISHDTNKFDIPLDININDDSTLPEIHRSFDAEAVDENETMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYLDPNTSVDGTMEIDESLNDVSDVMNVQFEMQPLNLQTQHSEDKYDFIDNNRGLLDLKKPKRTLWKCKKCNYKDPSKEALLEHVREHSRSDGIQDESNKHPITKKTENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPFRSSDKKLLIAHLQQHQPSPNSIFKCYFCPYFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPVPEQHTTATSSLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIANKRVESEADLEASISAQNKSDLKLDLDEIPYVWVSAKNEFHKMYKCRYCSYVNSHKCKIPNHEKIHCIVFENNDTTIYKCLECKFTCDSASRLAEHSKSHGEIYGRIYCPVEEDVPDEEQITKLRKVIEIEKSTNSEGFPRDESSANESREIKLLYFCQKCPARFFDDDELEAHDKFHDVTTHTIVCKSCEFSVSEDDQLAAHVTVHTDEYHTKTKMLKFIHNSHPSHRQPVLELVHCPNTSEITWIATGPSKIENVESSTKKTTDTKNVPKQYHCKLCPAKFFKTSALTYHLGLHGGEGEHKCKKCNYAVKNIGNLAKHELLHEKENKASNCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKSNNDYVESENQKDIKQDDSSDNIKLAIKTMPKGAPRSDFQQFSISDQQTLRLLQRRRSMHNSSKDATSEVSPTKERKMHMCLLCPYTNQRQDSLSNHYRRHGDIDVLNAGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLVPECFVANEDVSFTITRLDEDRESVDLKLDVQNKKFACNDEKIFVKVKTGELLVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01231174;
- 90% Identity
- iTF_01378011;
- 80% Identity
- -