Alep002821.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- retn
- Assembly
- GCA_947256265.1
- Location
- OX366528.1:9358941-9367828[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-20 1.9e-16 60.6 0.0 16 89 18 89 12 89 0.94 2 2 4.9 1.1e+04 -2.7 0.0 25 38 217 230 179 232 0.58
Sequence Information
- Coding Sequence
- ATGGCTATGACTGTGACAATAGGGCAAGGGAAGACAAGTGCGGTTTTGAGAGTCGGCACTCCAATCAATCGGTTACCCATCATGGCAAAGTCGGTGCTGGACCTGTACGAACTGTACAACCTGGTGATAGCCCGCGGCGGCCTGGTGGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCGTCCTCCATCACTTCAGCTGCGTTTACATTACGTACACAATATATGAAATACCTGTACGATTACGAGTGTGAGAAGAAGAATCTGTCCACCAGGAGTGAACTGGACGCAGCCATTGAAGGCAACAAACGTGAAGGACGCCGCGCCTCGGGGCAGTACGACGCACAAGCTGCACTAGCTATGCCTCAGTTAAACCGAGTGCCGGCGTCGCTTGCGCAGCTGTCCCAGCACATGCAGCCGCTGTCGCTCTCCCTGGGAGGCGTGGCGCCGCGCCTGCCACCGCTGCCGCCGCACGCGCCACATCTAGCACAACACGACATCGAGTACAGGGTCCGCGAGTACATGAAGATGATACAGCAACAGAGGGAGCTCATGAGAAATGGTTCCGAGTCACCCCCCAGCAACGGGCCAGCGCCAATAATGTCCCCACGTGATGCAGCCGCCCTTAGTGCTATCGACGTATCCCGCCTCACTCTCTGGTCACTCTACAATAATAACAATAACAACAGTCCACAGCCAGATTTGGAACCGCAACGCGAGGCTCTGAACCTGAGCGAGAGCCCTAACTCTATGACGAGCGGCGGCAAGCGAGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGGCCCGCGTCGCCGCGCTCCGATCTGCACTCGCCGCCCGCGCACCGGCACGCGAGGCGAGACACCACATCACCGCCGCAGATCAATGGACTTCCTAATACCAATGGTGTTAATGGAGCTGCTTTCAAAATTACCACCAGAGGTGACGCGAGCACAGGAGATCAGCAGTTAGTGGTGTCAATAGAGCTGAATGGTGTTACGTACGAAGGAGTACTCTTCCCCTCGGGCAACGGCCAGAACGGACACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MAMTVTIGQGKTSAVLRVGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSMTSGGKREACRSPAPPAKRRTPRPASPRSDLHSPPAHRHARRDTTSPPQINGLPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -