Ains007082.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acromyrmex insinuator
Gene Symbol
Hr39
Assembly
GCA_017607455.1
Location
JAANHZ010000770.1:559625-582695[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.8 6.3e+03 -4.8 8.2 130 161 38 69 18 97 0.59
2 5 1.5 3.3e+03 -3.9 7.0 81 163 301 391 224 409 0.61
3 5 4 8.9e+03 -8.1 10.2 77 143 437 503 398 536 0.38
4 5 4.6e-08 0.0001 20.8 0.0 1 22 603 624 603 641 0.91
5 5 1.3e-70 2.8e-67 226.9 0.0 180 408 772 994 721 994 0.87

Sequence Information

Coding Sequence
ATGTCAGAGCAAAACGGGCCCAGTGAGGGCCCAGGGCCAGGGCCCGGTTCGGATTCGAGCTGGTGGCCAAGCACGCAGACTTGGAAGTCGTCAGCAGCCGCCTCGTCGTCGACTTCATCGACTCCCACTTCAGCGTCCGTTTCTGTCTCCTGCTCTGCGTCCAGCTCGTCGACGAGCTCCTCCACCTCGATCAACTCGTCCACGACCTGTTGTCCCTCATCGTGTATCGGCGTGTCCTGCACGATGAGTCCAAGCCGTTCCACGGAAACGGGGAAAAATGTATCCGTCACTACTATTAACGTACCGCCCAATCAAGAAATGCATGATGCTAAAGGAGTATGTAAATATCTCGGGGGGCAAAACGGCGTGACAGTATCGGTGGTATCGACCTCGGTACTGGGATGTGGAAATGCGAATGCCGTCCCGACAAGCGGAATCTGCACGAATACGGGGCCACATAGTATCGGTATCGGAATTGGTGGCATCCTCGCTGCGAACGCAGCCGATATTGATGATCCTGAGGACAGCGACGGTGAGATCAGTAAGATTGACTTTCGAGGTGTCAATCTACGTTCGAAGAAGAAACGCGATGTATCGGGTAATCAGAATGGCGACAAGATCGGTGACGGAGAAGCAAACGGCGACGGCAGGGGTTGCTGCGATGATAATTCGCAACAGCAACCTGAGAGGCCCATGTCATGGGAGGGTGAATTATCGGATCAAGAAATGTCTTCCAATACAATTACTAATCAGGATCACAATGAAGAAACGTCTATGGAGGGAGTTCAAGTATGCAGTACGAGTCCTGGGCCTATGGAACAGAAGTTTCCTATTAAGTCAGAGCCGGATTTTCGATCTAGTCCAGGTTTCACAATAGGATCCTTTCACGATGGTGGATTGCCTATGACACATAATCAACAATTgcaacaacagcaacagcaacaacgCGGTATCGAAAACCTCGAACAAACTCAACAGAGCGACCTACCACTTCTTGTAGGCAAGCTTCTCGGTGGATACAACAATTCAACGCCTAATCATAGTCCCGTCCTCAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCGCAAGTGCCGTCACCAGATTCCGCCATTCATTCTGCGTATAGCGTCTTCAGTTCACCGACACAGAGTCCTCACGCAGCACGACACTCCGCCCTAGGAGCGGGTAGTCCGATACCCTCCTCGTCGTTGTCCCTCTCTCGACACAGCTTCAACAACTCGACTTCTTCGTTATCTCTATCGTTGTCGCATTCGCTTTCGAGAAACAATTCTGACGCTTCCAGTAGCTGCTACAGCTACGGTTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAGTCGAGACATCCGCATTCACACTCACAACATCATCAGCATCAAGTGGCGCAAGGTAGTCCGCTGCATCTACCAGCCTCGTCCGCAGTTGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGTTCGGAATTATCGCCAGACGGCCATCCCGTTGCGGAAGATCAGGAAGACTGTAGATTACCCTCGGCGCCATCGGGTATCTCCACCAGGCaacaattaattaacagtCCCTGCCCGATTTGCGGTGACAAGATAAGCGGCTTCCATTATGGCATCTTCTCGTGTGAATCGTGCAAGGGATTTTTCAAGCGCACCGTCCAGAATCGTAAGAACTATGTGTGCCTTAGAGGCGCAGGTTGTCCGGTCACCGTGGCCACGAGGAAAAAGTGCCCAGCCTGCCGCTTCGATAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAGTGTACCTATACTCTGCCAAATCTCGTTGGTAGTCCTGCTGGTATGACCAATGAAAAAATGACGACGGCAGGTAATTGCAGCCCGGCACCAGCCGGTAGCGAGCACCATTATTCTGTTAGATATCATTCAAATCATTCTTACAAGATGCAAGTAGTACCTCAACTTTTGCAAGACATCATGGATGTAGAACATCTTTGGCATTATAACGATAACGATCGAATAAGCGGTAGTGGAGGAATACTTGGAAGTGTAAGGAATACCGGTGGTGACACTCTGCTGTTCAGTGGAGCCGGAAGTAGTCCAGCGCTCAGTGGCACTGGAACTGCGACCAGTATTGGCGTCGGAAACAACGGAGGTGCAGTGGAATGTTCGTCGAATGACTCTAGCAATGTCGATACTAATAGCAGAAGGGGAGAAACGGCGAGCCCTACTGATTCGATCTTAACGGGGGCGTCCGATCAACATTCCACAAATGGCAATACCactaataatagtaattctCAAATTGCCAGTAATTCCAACGGTAATTCAGCGCAGCATCCAGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTCTATAAGATCGTCAAGTGGTGCAAAAGTTtgccattatttaaaaatatttcaatcgaTGATCAAATCTGTTTGTTGATTAACTCTTGGTGTGAGCTACTACTTTTCTCTTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTCGGCAAGTCGATTACTTTAGAACAGGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCACTTTTACCAACAATCTGCGAAGACTGAGAGTAGACCAATATGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACGTCCGATACAAGCGAATTAAAAGAGCCTGAAAAGGTTAGAGCTTCTCAAGAAAAGGCACTTCAAGCACTCCAGCAATATACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTTGGTGAATTATTGTTGAGAATTCCAGATCTGCAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGTGCCGAGGGAGAAGGCAGCTCGTTTAACcttttaatggaattattgAGAGGAGATCAC
Protein Sequence
MSEQNGPSEGPGPGPGSDSSWWPSTQTWKSSAAASSSTSSTPTSASVSVSCSASSSSTSSSTSINSSTTCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDAKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGEANGDGRGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQSRHPHSHSQHHQHQVAQGSPLHLPASSAVAAHHYSSSSVPGSELSPDGHPVAEDQEDCRLPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPNLVGSPAGMTNEKMTTAGNCSPAPAGSEHHYSVRYHSNHSYKMQVVPQLLQDIMDVEHLWHYNDNDRISGSGGILGSVRNTGGDTLLFSGAGSSPALSGTGTATSIGVGNNGGAVECSSNDSSNVDTNSRRGETASPTDSILTGASDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLTFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_00016738;