Ains001884.1
Basic Information
- Insect
- Acromyrmex insinuator
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_017607455.1
- Location
- JAANHZ010000245.1:175991-191258[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-92 2.7e-88 295.1 24.8 45 300 4 255 1 255 0.95 2 3 0.0051 45 2.2 4.1 122 171 255 304 254 308 0.91 3 3 0.056 5e+02 -1.3 6.6 195 237 287 328 276 330 0.54
Sequence Information
- Coding Sequence
- ATGTGCAgAACCATGAGAGTAACTCCAGATCCAGTACGTACATCACGACTTCTTACAAATTCCAATAATTTCCAATCGAGTCGTAGATCTTCAGAAGATTCATTGGAAGATGCAGGATTAAGCAGAGATATTAGGctggaattaaaagaatttgaagaaaaatttagaaaggCTATGATAGCTAATGCTCAGTTAGACAATGAAAAATCATCTTATGCCTACCAAGTTGATttgttaaaagataaattggaAGAATTAGAGGAAACTACTACACAATTACGTAgagaattaagagaaaaaaatcgagatGTTGAACAATTAAAACGGGTCAGTCAGCGATTGAAAGAAGATTTAGATATTTGCAGAGCGCAATTAGTAGAAAGAGATACACTTATACAAgaAAACGGTTTAGTTATTGTTGATAATAAGGAAAATGAAGATGAGGATaacgaaaatattgaaaatggatTATGTCATAAAAAGAAGGTATTAGTCAGTACAGAAGCTGCAGAATTATTAGAAACAGCTGGTAAAGGTTCACTagatattcGACTGAGGAAATTTGCTTctgaaaaaaaggaattgcAAGATGAGATTCGTCATTTAAGATTGGAATTAGAAGAAACTAGAAATCGCATGAGACCCGAAAAATCATCTGGTTCGATATTAgGTTTATCAGATAACGAAGATATTCAACGTgaagcaaataaattattggccgattataaatttaaattacaaaaagcgGAACAAGATATGTCTACACTGCAAGCAACAGTAGCTAGACTAGAAAGTCAAGTAATTCGTTACAAATCAGCTGCAGAAGCATCTGAAAAAGCAGAAGATGAGTTGaaagtagaaaaaagaaagttgcAGAGAGAAgTAAGAGAAACACAAAGTCGTGTAGAGGAATTGGAGACAGCAAATTCTCATCTACAAAGGAGATTGGATAAACTTAAAAACGCTAAATCAGCTCTTCTAAAAGAGCTTTGA
- Protein Sequence
- MCRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETTTQLRRELREKNRDVEQLKRVSQRLKEDLDICRAQLVERDTLIQENGLVIVDNKENEDEDNENIENGLCHKKKVLVSTEAAELLETAGKGSLDIRLRKFASEKKELQDEIRHLRLELEETRNRMRPEKSSGSILGLSDNEDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQSRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01266881;
- 80% Identity
- iTF_00015367;